Identifiers and Description

Gene Model Identifier

TTHERM_00079520

Standard Name

GTU1 (Gamma-TUbulin 1)

Aliases

PreTt10197 | 5.m00548 | 3828.m01461

Description

GTU1 tubulin gamma chain; Gamma-tubulin; GTU1p is essential; localizes to microtubule-organizing centers in vegetative cells: basal bodies- macronuclear envelopes- micronuclear envelopes- and contractile vacuole

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity (IEA) | GO:0008886
• obsolete signal peptidase II activity (IDA) | GO:0009005 | Ref:12356864
• sodium-dependent phosphate transmembrane transporter activity (ISS) | GO:0015321 | Ref:12356864

Biological Process

• cocaine biosynthetic process (IDA) | GO:0050799 | Ref:12356864
• determination of intestine left/right asymmetry (IEA) | GO:0071908
• galactose catabolic process via UDP-galactose (IEA) | GO:0033499
• intrinsic apoptotic signaling pathway in response to DNA damage (ISS) | GO:0008630 | Ref:12356864
• monoatomic ion homeostasis (IDA) | GO:0050801 | Ref:12356864
• oligosaccharide biosynthetic process (IDA) | GO:0009312 | Ref:12356864
• positive regulation of fast-twitch skeletal muscle fiber contraction (IDA) | GO:0031448 | Ref:8124706
• progesterone biosynthetic process (IEA) | GO:0006701
• regulation of slow-twitch skeletal muscle fiber contraction (IDA) | GO:0031449 | Ref:12356864
• response to cortisol (IMP) | GO:0051414 | Ref:12356864
• somitogenesis (ISS) | GO:0001756 | Ref:12356864

Domains

• ( PF00091 ) Tubulin/FtsZ family, GTPase domain
• ( PF03953 ) tubulin/FtsZ family, C-terminal domain

Gene Expression Profile

Tetrahymena Stock Center

• ( SD01215 ) Macronucleus: GTU1 gene completely replaced by GTU1 gene with HA tag at the C terminus. Also has neo2 cassette in the 3' flanking region
• ( SD01340 ) Micronucleus: GTU1 replaced by neo2 Macronucleus: GTU1with c-terminal HA tag into MTT1 locus, partial replacement
• ( SD01341 ) Micronucleus: GTU1 replaced by neo2 Macronucleus: GTU1with c-terminal HA tag into MTT1 locus, partial replacement
• ( SD01342 ) Micronucleus: GTU1 replaced by neo2 Macronucleus: GTU1with c-terminal HA tag into MTT1 locus, partial replacement
• ( SD01363 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation T146V and c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD01364 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation T146V and c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD01365 ) Macronucleus: GTU1 with mutation T146G and c-terminal HA tag into the BTU1 locus under control of MTT1 promoter. Not sure if complete replacement.
• ( SD01366 ) Macronucleus: GTU1 with mutation T146G and c-terminal HA tag into the BTU1 locus under control of MTT1 promoter. Not sure if complete replacement.
• ( SD01367 ) Micronucleus: Neo2 replaces coding of GTU1
• ( SD01368 ) Micronucleus: Neo2 replaces coding of GTU1
• ( SD01369 ) Micronucleus: Neo2 replaces coding of GTU1
• ( SD01412 ) Macronucleus: HA tag at c-terminus of GTU1 with neo2 in 3' flanking region
• ( SD01413 ) Macronucleus: HA tag at c-terminus of GTU1 with neo2 in 3' flanking region
• ( SD01414 ) Macronucleus: HA tag at c-terminus of GTU1 with neo2 in 3' flanking region
• ( SD01415 ) Micronucleus: GTU1 replaced by neo2 Macronucleus: GTU1 into MTT1 locus, partial replacement
• ( SD01416 ) Micronucleus: GTU1 replaced by neo2 Macronucleus: GTU1 into MTT1 locus, partial replacement
• ( SD01417 ) Micronucleus: GTU1 replaced by neo2 Macronucleus: GTU1with c-terminal GFP tag into MTT1 locus, partial replacement
• ( SD02043 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations A101G and c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD02044 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124-A and E126-A and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02045 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124-A and E126-A and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02047 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with 3HA tags at c-teminus into the MTT1 locus, partial replacement.
• ( SD02048 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with 3HA tags at c-teminus into the MTT1 locus, partial replacement.
• ( SD02051 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124K and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02052 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124K into the MTT1 locus, partial replacement.
• ( SD02057 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation K192A R193A into the MTT1 locus, partial replacement.
• ( SD02058 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation K192A R193A and C-terminal HA tag into the MTT1 locus, partial replacement.
• ( SD02143 ) Micronucleus: neo2 Macronucleus: Into MTT1 locus, GTU1 with HA and TAP tag
• ( SD02144 ) Micronucleus: neo2 Macronucleus: Into MTT1 locus, GTU1 with HA and TAP tag
• ( SD02145 ) Micronucleus: neo2 Macronucleus: Into MTT1 locus, GTU1 with HA and TAP tag
• ( SD02146 ) Micronucleus: neo2 Macronucleus: Into MTT1 locus, GTU1 with HA and TAP tag
• ( SD02147 ) Micronucleus: neo2 Macronucleus: Into MTT1 locus, GTU1 with HA and TAP tag
• ( SD02192 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation T270A,Y272A. Not sure if complete replacement.
• ( SD02193 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation T270A,Y272A. Not sure if complete replacement.
• ( SD02194 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations T270A, Y272A anc c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD02195 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations T270A, Y272A anc c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD02210 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation D116A,D117A and c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD02211 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation D116A,D117A and c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD02292 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124-A and E126-A and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02293 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124-A and E126-A and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02306 ) Macronucleus: GTU1 with c-terminal HA tag into the BTU1 locus under control of MTT1 promoter. Not sure if complete replacement.
• ( SD02307 ) Macronucleus: GTU1 with mutation T146G and c-terminal HA tag into the BTU1 locus under control of MTT1 promoter. Not sure if complete replacement.
• ( SD02308 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations K358A,K359A anc c-terminus HA tag into the MTT1 locus, partial replacement.
• ( SD02473 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation K286E and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02474 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation K286E and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02516 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation R285D,K286D and HA tag at c-teminus into the MTT1 locus, partial replacement.
• ( SD02531 ) Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutation T146V and c-terminus HA tag into the MTT1 locus, partial replacement.

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_21979	0
	Description: None
Tetrahymena borealis	EI9_06993.1	9.997093137033517e-262
	Description: tubulin/FtsZ family, GTPase domain-containing protein (450 aa)
DictyBase	DDB_G0271738	9.997093137033517e-262
	Description: tubC on chromosome: 2 position 727031 to 728611
Oxytricha	Contig3513.0.g10	9.997093137033517e-262
	Description: Tubulin/FtsZ family, GTPase domain
SGD	YLR212C	9.996050283847121e-108
	Description: TUB4 Gamma-tubulin, involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body
WormBase	WBGene00006540	4.001242549923285e-107
	Description: locus:tbg-1 Tubulin gamma chain status:Confirmed UniProt:P34475 protein_id:CAA80164.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:25660693: Kushida Y, Takaine M, Nakano K, Sugai T, Numata O (2015) Dynamic Change of Cellular Localization of Microtubule-Organizing Center During Conjugation of Ciliate Tetrahymena thermophila. Zoological science 32(1):25-32
2. Ref:21246753: Kushida Y, Nakano K, Numata O (2011) Amitosis requires ?-tubulin-mediated microtubule assembly in Tetrahymena thermophila. Cytoskeleton (Hoboken, N.J.) 68(2):89-96
3. Ref:16344310: Shang Y, Tsao CC, Gorovsky MA (2005) Mutational analyses reveal a novel function of the nucleotide-binding domain of gamma-tubulin in the regulation of basal body biogenesis. The Journal of cell biology 171(6):1035-44
4. Ref:12356864: Shang Y, Li B, Gorovsky MA (2002) Tetrahymena thermophila contains a conventional gamma-tubulin that is differentially required for the maintenance of different microtubule-organizing centers. The Journal of cell biology 158(7):1195-206
5. Ref:11891286: Shang Y, Song X, Bowen J, Corstanje R, Gao Y, Gaertig J, Gorovsky MA (2002) A robust inducible-repressible promoter greatly facilitates gene knockouts, conditional expression, and overexpression of homologous and heterologous genes in Tetrahymena thermophila. Proceedings of the National Academy of Sciences of the United States of America 99(6):3734-9
6. Ref:8864661: Liang A, Ruiz F, Heckmann K, Klotz C, Tollon Y, Beisson J, Wright M (1996) Gamma-tubulin is permanently associated with basal bodies in ciliates. European journal of cell biology 70(4):331-8
7. Ref:8124706: Stearns T, Kirschner M (1994) In vitro reconstitution of centrosome assembly and function: the central role of gamma-tubulin. Cell 76(4):623-37

Sequences

>TTHERM_00079520(coding)
ATGCCTAGAGATATAATTACACTTTAAGTCGGCCAATGCGGAAACTAAATTGGTATGGAA
TTTTGGAAATAGCTTTGTTTAGAGCATGGTATTAACCAAGAAGGTATTTTACAAGAATAT
GCAACAAACACTGATGACAGAAAAGAAGTTTTCTTTTATTAAGCAGATGATTAGCATTAT
ATTCCAAGGGCCTGTCTTATTGATTTAGAAGACAGAGTTCTAAAGAGAATAGTTAAATAA
TCTGATTATAGTTCACTATATAACCCAGAAAATATTTTTTATGGAACTGATGGATCAGGT
GCTGGTAATGTGTGGGCATACGGTTATTAAGAAGCTAATAAAATCCAAGATGATCTTCTT
GATATGATTGACAGAGAAGCTGATACATCTGATAGTTTTGAAGCTTTTCTTTTGATTCAT
AGTATTGCAGGTGGTACTGGTTCAGGTGTTGGCTCTTATTTATTGGAGAAATTAAATGAT
AGATTCCCTAAAAAAATTATTAAGACTTACTCTGTTTTTCCTAGTGGACACACAGATGGT
GTCGTACATCCTTATAACTCTCTTTTAACTTTAAAGAGACTTGCTTTGAATGCAGATGCA
ACCACTGTTTTAGATAATAACGCTTTAGAAAAAATAGCACAAGACAGATTAAAATTGGAA
AATCCTACAATTGAAACCACAAACTCACTTGTCTCAACAGTTATGGCAGCATGTACTACC
ACACTCAGATACCCTGGTTATATGAATAACGATTTAGTTGGTTTACTTGCATCTCTTGTT
CCTACACCTAAATGTCATTTCTTAATGACTGGATATACTCCTATCTCTATTGATAGACAT
ATAAAAACTATTAGAAAGACTACTGTACTTGATGTTATGAGAAGATTACTTTAAACAAAG
AATATCATGGTTAGTGCTTCAACTAAAAAGGGACAATATATTTCAATTATGAATGTAATT
CAAGGAGAAGTTGATGCATCTCAAATTCATAAATCACTTTAGCGTATTAGAGAAAGAAAA
TTAGCTAACTTTATTAACTGGGGACCTGCCTCCATACAAGTTGCATTATCTAAAAAATCA
CCATACATAGAAACATCTCATAAAGTAAGTGGTCTTATGCTCGCCAACCACACAAGCATC
CATACACTTTTTGAGAAGATTATCTCTAACTTTGACATAATGAGAAAAAAGAATGCTTAT
ATAGAATAGTTTAAAAAGGTTGATTCTTTTAACTTAGAGGAGTTCGATGATTCCAAGGAA
GTAGTACAATAATTAATAGAAGAATATAAAGCTGCTGAAGAACCTAACTATTTAGATTAC
TTCGATGATGGCTTGGAAGACGAAAACTGA

>TTHERM_00079520(gene)
ATGCCTAGAGATATAATTACACTTTAAGTCGGCCAATGCGGAAACTAAAGTATTAGATTT
ATTTGAGATTAGAGTTTAAATAATGGAGATTTGCTTATTATTTTAGCACTTCATCAGCTT
TATAGGAATGGATGGATTTATAATTTAATTTTTTTAAAAATTCAAGTTGGTATGGAATTT
TGGAAATAGCTTTGTTTAGAGCATGGTATTAACCAAGAAGGTATTTTACAAGAATATGCA
ACAAACACTGATGACAGAAAAGAAGTTTTCTTTTATTAAGCAGATGATTAGCATTATATT
CCAAGGGCCTGTCTTATTGATTTAGAAGACAGAGTTCTAAAGAGAATAGTTAAATAATCT
GATTATAGTTCACTATATAACCCAGAAAATATTTTTTATGGAACTGATGGATCAGGTGCT
GGTAATGTGTGGGCATACGGTTATTAAGAAGCTAATAAAAGTAAATTTTAAAACTTATAA
ATTAAAAATTGTTATAAAATTACTAAAAATGTTGTGTTTTAGATAAGCAAAATTTTTAAA
ATTATATCAAAATTTATTGAAAGAATTAAGGAAATTCGATTTAAAGATTGAGATTAAATG
AAAGAATTGCATAGAAATATAATGGATTTTAATCTATAATTTACAAATAAAAATAATTGA
GCTTATCAAATTTTTAAAAAAATTATGTTCTCTCATTTATATGTGATGCTTTATTATAAT
TTAAAAAATATTAGTCCAAGATGATCTTCTTGATATGATTGACAGAGAAGCTGATACATC
TGATAGTTTTGAAGCTTTTCTTTTGATTCATAGTATTGCAGGTGGTACTGGTTCAGGTGT
TGGCTCTTATTTATTGGAGAAATTAAATGATAGATTCCCTAAAAAAATTATTAAGACTTA
CTCTGTTTTTCCTAGTGGACACACAGATGGTGTCGTACATCCTTATAACTCTCTTTTAAC
TTTAAAGAGACTTGCTTTGAATGCAGATGCAACCACTGTTTTAGATAATAACGCTTTAGA
AAAAATAGCACAAGACAGATTAAAATTGGAAAATCCTACAATTGAAACCACAAACTCACT
TGTCTCAACAGTTATGGCAGCATGTACTACCACACTCAGATACCCTGGTTATATGAATAA
CGATTTAGTTGGTTTACTTGCATCTCTTGTTCCTACACCTAAATGTCATTTCTTAATGAC
TGGATATACTCCTATCTCTATTGATAGACATATAAAAACTATTAGAAAGACTACTGTACT
TGATGTTATGAGAAGATTACTTTAAACAAAGAATATCATGGTTAGTGCTTCAACTAAAAA
GGGACAATATATTTCAATTATGAATGTAATTCAAGGAGAAGTTGATGCATCTCAAATTCA
TAAATCACTTTAGCGTATTAGAGAAAGAAAATTAGGTAAAATTTTAAATAAATAAAAATT
GAATGAATAAAAATATTTTAAAAAAAGCTAACTTTATTAACTGGGGACCTGCCTCCATAC
AAGTTGCATTATCTAAAAAATCACCATACATAGAAACATCTCATAAAGTAAGTGGTCTTA
TGCTCGCCAACCACACAAGCATCCATACAGTAATAATTATTATTATTATTCTAAAATTAA
AAAAATATTTTTTGCCTTATATTAAAAGCTTTTTGAGAAGATTATCTCTAACTTTGACAT
AATGAGAAAAAAGAATGCTTATATAGAATAGTTTAAAAAGGTTGATTCTTTTAACTTAGA
GGAGTTCGATGATTCCAAGTAAATAAACTCTAAAAATCATTTTTAATTAATATATTTATT
ACTAATTTAAATAGGGAAGTAGTACAATAATTAATAGAAGAATATAAAGCTGCTGAAGAA
CCTAACTATTTAGATTACTTCGATGATGGCTTGGAAGACGAAAACTGA

>TTHERM_00079520(protein)
MPRDIITLQVGQCGNQIGMEFWKQLCLEHGINQEGILQEYATNTDDRKEVFFYQADDQHY
IPRACLIDLEDRVLKRIVKQSDYSSLYNPENIFYGTDGSGAGNVWAYGYQEANKIQDDLL
DMIDREADTSDSFEAFLLIHSIAGGTGSGVGSYLLEKLNDRFPKKIIKTYSVFPSGHTDG
VVHPYNSLLTLKRLALNADATTVLDNNALEKIAQDRLKLENPTIETTNSLVSTVMAACTT
TLRYPGYMNNDLVGLLASLVPTPKCHFLMTGYTPISIDRHIKTIRKTTVLDVMRRLLQTK
NIMVSASTKKGQYISIMNVIQGEVDASQIHKSLQRIRERKLANFINWGPASIQVALSKKS
PYIETSHKVSGLMLANHTSIHTLFEKIISNFDIMRKKNAYIEQFKKVDSFNLEEFDDSKE
VVQQLIEEYKAAEEPNYLDYFDDGLEDEN