Identifiers and Description

Gene Model Identifier

TTHERM_00094000

Standard Name

RDN2 (RDr1-associated Nucleotidyltransferase)

Aliases

PreTt16555 | 6.m00629 | 3836.m02213

Description

RDN2 RNA-dependent RNA polymerase-associated nucleotidyltransferase; Nucleotidyltransferase; exhibits RNA terminal uridine transferase activity in vitro; involved in 23-24 nt small RNA metabolism; Nucleotidyltransferase superfamily

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:22706992: Talsky KB, Collins K (2012) Strand-asymmetric endogenous Tetrahymena small RNA production requires a previously uncharacterized uridylyltransferase protein partner. RNA (New York, N.Y.) 18(8):1553-62
  2. Ref:20622019: Talsky KB, Collins K (2010) Initiation by a eukaryotic RNA-dependent RNA polymerase requires looping of the template end and is influenced by the template-tailing activity of an associated uridyltransferase. The Journal of biological chemistry 285(36):27614-23
  3. Ref:19656801: Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32
  4. Ref:19451546: Lee SR, Talsky KB, Collins K (2009) A single RNA-dependent RNA polymerase assembles with mutually exclusive nucleotidyl transferase subunits to direct different pathways of small RNA biogenesis. RNA (New York, N.Y.) 15(7):1363-74

Sequences 

>TTHERM_00094000(coding)
ATGGAAGGCGATTTCTTTTAGCAAACATTTCTAAAATATATAAAGTATAGACCAAGCAAG
AATATAAATGTGCATTAGTATTTATTGAAGAAATTAGAAGTTGAGTAATTAAGTTAAAGT
TAATTATTAAGCTTAAAAAATAGTTTAGATGATTTTATTCGTAAATATAATTTTCATAAT
GATGAATGGATTCTAATTAGTCTAATTGAAAATTTAGCACATTCAGACTTATTATTTTCA
AGCGATACTGAAAAATATATTTTAATTATTAAGAAAAGATTCTACCTCAATTTACTGAAT
AAACTTGAGAATAATATTTCAAGTAAATTTGATCTTTAGGAGCTCTAGAAGTGTTTAAAG
TCATTTTACTTAAGCTATAAAAATAATGTTTATGATTTGTTTTTAAATGCTTCAAATGAT
ATTTAAATAATAAAGTAGATAGATAGCAACCTAGGAGAAAAATTAAAAAAAATTGAAAAG
CATGTATCTGAGATTTTAAAGAGGCTTAAAAGTAATGAATCGTAGTAAATGTCTATTAAT
TAGAATGAGTAGAACATCTAATAAAATAAAGAAAATATTAATGAAATAACCAGTAGCAAT
TAATTAGAAATTTTATTAAATTAAATTTATAAGTAAGAAAAGATCAGTATTTAGTTTAAT
GAAGAATTACTTAATCAAGAAGTCAATATGGTAAATTAAATTGTGAGTGAGATGAATTTA
AATAAAATTATTGGGCTATAAAATGTGTATGTTCATCCGTATGGGTCAGTTGTTAGTGGG
TTTGGTTAGAATGATAGTGACATTGATATAAGCATAAATACAGATTGCTATTTAGATGAA
AGAGTATTTCTTTCTCTTATTTATGATTTCATGAAAAATTATTTGCATAAATATAAAATC
AAATATTAAAAACTTGAATTAAAATTAGATGCGCGTATTCCTTTAATAACTCTTGTTAAA
CAGAAAGATAATGTTAATTTGAAAAGTAATACAGTTTCAATAGACATATGTATAAATAAT
CTACTAGGATGCGCAAATTCAAAAATGCTAAAAGTTATATCTTAGATTCATCCCTTAGTA
AAGTAGCTAGGAATAATCATTAAATATTGGGCGAAGTAGAATGGTCTTATAAGCAAAAAA
ACTCTTAGTTCATATGCATTTATCCTCATAATGATCTGCTTTTTATAGAGAAAGAAGCTA
ATTGATCCTTATTTTTAAGAGAAAGTTTAAAAAAGATAAAGTGATCCAAAATATTCTACT
TTGATTAAGAGGACAAAGGAAACTGATTAGGAATTTTAAACAAACCTTTATTATGTGCAA
GATCCCTCGCATTTACAGAAATCTCTAAAAAAGTATAAAGAAAACAATCCAAACTAAAAA
ACTTTATTAGACATGAATCTTGCAAGCTTATTCAGTGAGTTTATTGAATATTACTCAGAC
ACCACTGATGAGAATAGAAGATATATAGATATTATGAATAATTATATAGTAAAATCATAT
AATAAAAATTTATTCTTTTATATTATTGACCCATTTGATAATTATCATAACCCAGGAGAA
AGAAGCAGAGTAGAGAATATAGATGATAACATATTTATAAATAGATTTAGGTTTGCTAAG
TAAAAATTGCAAGACAAACAATATTCGCAAATATTTGAATTAAAATTTCAATGA



>TTHERM_00094000(gene)
TTGAAAGTAATTAGAATTATGTAAAAATATTATCTAATTGAAATAATAAGCAATTATTTG
TATCAGATTTAAGTTAAAAAATTTAATTAAATTAGTTTAGTTTAGGCACAAATTAGTCAA
TATATAAAGCAACAATTAATCTTATTGATTTGAAAAATTATTATCAATGGAAGGCGATTT
CTTTTAGCAAACATTTCTAAAATATATAAAGTATAGACCAAGCAAGAATATAAATGTGCA
TTAGTATTTATTGAAGAAATTAGAAGTTGAGTAATTAAGTTAAAGTTAATTATTAAGCTT
AAAAAATAGTTTAGATGATTTTATTCGTAAATATAATTTTCATAATGATGAATGGATTCT
AATTAGTCTAATTGAAAATTTAGCACATTCAGACTTATTATTTTCAAGCGATACTGAAAA
ATATATTTTAATTATTAAGAAAAGATTCTACCTCAATTTACTGAATAAACTTGAGAATAA
TATTTCAAGTAAATTTGATCTTTAGGAGCTCTAGAAGTGTTTAAAGTCATTTTACTTAAG
CTATAAAAATAATGTTTATGATTTGTTTTTAAATGCTTCAAATGATATTTAAATAATAAA
GTAGATAGATAGCAACCTAGGAGAAAAATTAAAAAAAATTGAAAAGCATGTATCTGAGAT
TTTAAAGAGGCTTAAAAGTAATGAATCGTAGTAAATGTCTATTAATTAGAATGAGTAGAA
CATCTAATAAAATAAAGAAAATATTAATGAAATAACCAGTAGCAATTAATTAGAAATTTT
ATTAAATTAAATTTATAAGTAAGAAAAGATCAGTATTTAGTTTAATGAAGAATTACTTAA
TCAAGAAGTCAATATGGTAAATTAAATTGTGAGTGAGATGAATTTAAATAAAATTATTGG
GCTATAAAATGTGTATGTTCATCCGTATGGGTCAGTTGTTAGTGGGTTTGGTTAGAATGA
TAGTGACATTGATATAAGCATAAATACAGATTGCTATTTAGATGAAAGAGTATTTCTTTC
TCTTATTTATGATTTCATGAAAAATTATTTGCATAAATATAAAATCAAATATTAAAAACT
TGAATTAAAATTAGATGCGCGTATTCCTTTAATAACTCTTGTTAAACAGAAAGATAATGT
TAATTTGAAAAGTAATACAGTTTCAATAGACATATGTATAAATAATCTACTAGGATGCGC
AAATTCAAAAATGCTAAAAGTTATATCTTAGATTCATCCCTTAGTAAAGTAGCTAGGAAT
AATCATTAAATATTGGGCGAAGTAGAATGGTCTTATAAGCAAAAAAACTCTTAGTTCATA
TGCATTTATCCTCATAATGATCTGCTTTTTATAGAGAAAGAAGCTAATTGATCCTTATTT
TTAAGAGAAAGTTTAAAAAAGATAAAGTGATCCAAAATATTCTACTTTGATTAAGAGGAC
AAAGGAAACTGATTAGGAATTTTAAACAAACCTTTATTATGTGCAAGATCCCTCGCATTT
ACAGAAATCTCTAAAAAAGTATAAAGAAAACAATCCAAACTAAAAAACTTTATTAGACAT
GAATCTTGCAAGCTTATTCAGTGAGTTTATTGAATATTACTCAGACACCACTGATGAGAA
TAGAAGATATATAGATATTATGAATAATTATATAGTAAAATCATATAATAAAAATTTATT
CTTTTATATTATTGACCCATTTGATAATTATCATAACCCAGGAGAAAGAAGCAGAGTAGA
GAATATAGATGATAACATATTTATAAATAGATTTAGGTTTGCTAAGTAAAAATTGCAAGA
CAAACAATATTCGCAAATATTTGAATTAAAATTTCAATGAAAACTATTTTTTCTTTTTAT
TTTCTTAGTTTGTTTATTTGATTTGTTGTTGTTTGAATTTAAAATTCTATCATATTTAAA
ATATA



>TTHERM_00094000(protein)
MEGDFFQQTFLKYIKYRPSKNINVHQYLLKKLEVEQLSQSQLLSLKNSLDDFIRKYNFHN
DEWILISLIENLAHSDLLFSSDTEKYILIIKKRFYLNLLNKLENNISSKFDLQELQKCLK
SFYLSYKNNVYDLFLNASNDIQIIKQIDSNLGEKLKKIEKHVSEILKRLKSNESQQMSIN
QNEQNIQQNKENINEITSSNQLEILLNQIYKQEKISIQFNEELLNQEVNMVNQIVSEMNL
NKIIGLQNVYVHPYGSVVSGFGQNDSDIDISINTDCYLDERVFLSLIYDFMKNYLHKYKI
KYQKLELKLDARIPLITLVKQKDNVNLKSNTVSIDICINNLLGCANSKMLKVISQIHPLV
KQLGIIIKYWAKQNGLISKKTLSSYAFILIMICFLQRKKLIDPYFQEKVQKRQSDPKYST
LIKRTKETDQEFQTNLYYVQDPSHLQKSLKKYKENNPNQKTLLDMNLASLFSEFIEYYSD
TTDENRRYIDIMNNYIVKSYNKNLFFYIIDPFDNYHNPGERSRVENIDDNIFINRFRFAK
QKLQDKQYSQIFELKFQ