Identifiers and Description

Gene Model Identifier

TTHERM_00094040

Standard Name

RDN1 (Rdr1-associated nucleotidyltransferase 1)

Aliases

PreTt16559 | 6.m00633 | 3836.m02217

Description

RDN1 RNA-dependent RNA polymerase-associated nucleotidyltransferase; associated with Rdr1; exhibits terminal RNA uridine transferase activity in vitro; Nucleotidyltransferase superfamily

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:22706992: Talsky KB, Collins K (2012) Strand-asymmetric endogenous Tetrahymena small RNA production requires a previously uncharacterized uridylyltransferase protein partner. RNA (New York, N.Y.) 18(8):1553-62
  2. Ref:20622019: Talsky KB, Collins K (2010) Initiation by a eukaryotic RNA-dependent RNA polymerase requires looping of the template end and is influenced by the template-tailing activity of an associated uridyltransferase. The Journal of biological chemistry 285(36):27614-23
  3. Ref:19451546: Lee SR, Talsky KB, Collins K (2009) A single RNA-dependent RNA polymerase assembles with mutually exclusive nucleotidyl transferase subunits to direct different pathways of small RNA biogenesis. RNA (New York, N.Y.) 15(7):1363-74

Sequences 

>TTHERM_00094040(coding)
ATGAATATTAATTTGACTGATAAGTAAAAAATATATAGCAATGTCATCAAAAATGCATTA
GAAAAAATTTACAAAAATGATAAAGTAGATATTTTAAACTTAATTAATACAAGCTTGGGC
TGTTAGACTATAGAAATTAAATACGATGTGGAATTCCACTAGTTACTTGCTCAATATTTT
CAAAATATGCGTTATTAAGATACAAAGGATAAAGAAGATGTGCTTTAAAAACTGCTTGAG
TAATGCCTCAGTCAAAATCTAATTTTAAATACTTAAAAAAGTAAACTTTCTAAACAAATC
ATCATTTTGAAGCGCCTAAGAAGAATTTAATAAAAGCTTAAGGATGACCCAAAAAATGCT
TTGGATCATTTGATAGAAGAATACGACTAAGAGGAGGAAAATTGTGATGAAGAAGTGCTA
TTATAGCGTTTCGAATAGGATAAAACAGACTTAAGAATGCAAATAGAAGACAATGTTAAA
GATTTAAAAAAAGAAAATATAAAATATCTGTTGTTGAAAAAATAAAATAATTAAGAAAAA
AATATTTAAAATGAATAAAATTTAGAATAAATTCTTTTAGATGTATATAATCAGCAAAAA
ATTGAAGAGAGTTTCTCAAAAAGACTTCTATAAGAAGTTAATTTTATCAGAAAGATCATT
AGTATGATGAGGCTTAAGGAGTTATTTGGCTTAGAGTATGTCACAGTATAGCCTTATGGT
TCTATAGTTAGTGGATTTGCTTAAAAATCTAGCGATGTTGATATCAGTATTAATACTAAC
TGCTATATAGATGAGAGCTCATTTATATAACTTCTTCATAACTTCATAAAGCAGTATTGC
AGTAATAAATCAATTAAGAATGTTGAAACTGAGCCAGTTCTTCAGGCCTAAACTCCGTTG
CTCAAATACACAAGGAAAGATACAGTAGATCAATAATAAATAAAAATAGATATAGATATT
TGTGTTAACAATATCTTGGGATGCACTAATTCATTAATGCTTTACACTCTTTCCTAACTG
CATCCAAAAATTTAATAATTAGGAATTATCATTAAACACTGGGCTAAGTAAAGAGGTGTA
TCCAGTAAAAGTCACTTATCCTCCTATTCCTTTATTTTGATGATGTTTTCCTTCCTTTTC
AGAGAAAAGATATTGAACTCAGAGTTTGTCAAAAAAAGTAAAAGTAAAGAAAATTAGTGT
TAAGTCAAAATTAAAAGAAAAAAAAAGGATGGTGAATAAATATTTTAAACTAATTTATAC
TTTTATAGCAATGTAGAAGACTTAAAAATGAAATTAGCTATATGGAGAAAAGAAAAAAAC
TTGCCTTCCTTAGATGATGTATCACTAAGCTAACTTTTTATAGATTTTATAAAATTCTAT
TAATCTAGCTTTAATTTTAAAGACAAGAGGTTTATTTCCATTTTTAACTTTGATGTCAAT
TACAGCAATAACAATTTTAAATATGAACTTTATGATGAAAATTATTACTTCAATATTGAA
GATCCATTTGATACTAAGCACAATCCTGGATAAAAAACTCAAAACAAATAAGAATAATAT
AAACAGGCCTTTGATGATGCTTTAAATTAAATTGAAAGTAAGTAATATAATCTGCTATTC
TCATCTAAATGA



>TTHERM_00094040(gene)
AAATTTGATACAAATAGATATTGTGTGAAGCATTTAATTTTAGATAAAAGCTTTATATAA
TACAAATAAAAAAACAATAGGCTGGAAGGAAAACCATTAAAAAGTATTTTTCTCTTTTTT
AGACATACATATAGGCAGACACTCTATAGCTAATTATAAAGATAAGATTAGTAAACCATA
ATAAAGCATACAATTTAGAGAGAGATAAAAAAATAAGATGAATATTAATTTGACTGATAA
GTAAAAAATATATAGCAATGTCATCAAAAATGCATTAGAAAAAATTTACAAAAATGATAA
AGTAGATATTTTAAACTTAATTAATACAAGCTTGGGCTGTTAGACTATAGAAATTAAATA
CGATGTGGAATTCCACTAGTTACTTGCTCAATATTTTCAAAATATGCGTTATTAAGATAC
AAAGGATAAAGAAGATGTGCTTTAAAAACTGCTTGAGTAATGCCTCAGTCAAAATCTAAT
TTTAAATACTTAAAAAAGTAAACTTTCTAAACAAATCATCATTTTGAAGCGCCTAAGAAG
AATTTAATAAAAGCTTAAGGATGACCCAAAAAATGCTTTGGATCATTTGATAGAAGAATA
CGACTAAGAGGAGGAAAATTGTGATGAAGAAGTGCTATTATAGCGTTTCGAATAGGATAA
AACAGACTTAAGAATGCAAATAGAAGACAATGTTAAAGATTTAAAAAAAGAAAATATAAA
ATATCTGTTGTTGAAAAAATAAAATAATTAAGAAAAAAATATTTAAAATGAATAAAATTT
AGAATAAATTCTTTTAGATGTATATAATCAGCAAAAAATTGAAGAGAGTTTCTCAAAAAG
ACTTCTATAAGAAGTTAATTTTATCAGAAAGATCATTAGTATGATGAGGCTTAAGGAGTT
ATTTGGCTTAGAGTATGTCACAGTATAGCCTTATGGTTCTATAGTTAGTGGATTTGCTTA
AAAATCTAGCGATGTTGATATCAGTATTAATACTAACTGCTATATAGATGAGAGCTCATT
TATATAACTTCTTCATAACTTCATAAAGCAGTATTGCAGTAATAAATCAATTAAGAATGT
TGAAACTGAGCCAGTTCTTCAGGCCTAAACTCCGTTGCTCAAATACACAAGGAAAGATAC
AGTAGATCAATAATAAATAAAAATAGATATAGATATTTGTGTTAACAATATCTTGGGATG
CACTAATTCATTAATGCTTTACACTCTTTCCTAACTGCATCCAAAAATTTAATAATTAGG
AATTATCATTAAACACTGGGCTAAGTAAAGAGGTGTATCCAGTAAAAGTCACTTATCCTC
CTATTCCTTTATTTTGATGATGTTTTCCTTCCTTTTCAGAGAAAAGATATTGAACTCAGA
GTTTGTCAAAAAAAGTAAAAGTAAAGAAAATTAGTGTTAAGTCAAAATTAAAAGAAAAAA
AAAGGATGGTGAATAAATATTTTAAACTAATTTATACTTTTATAGCAATGTAGAAGACTT
AAAAATGAAATTAGCTATATGGAGAAAAGAAAAAAACTTGCCTTCCTTAGATGATGTATC
ACTAAGCTAACTTTTTATAGATTTTATAAAATTCTATTAATCTAGCTTTAATTTTAAAGA
CAAGAGGTTTATTTCCATTTTTAACTTTGATGTCAATTACAGCAATAACAATTTTAAATA
TGAACTTTATGATGAAAATTATTACTTCAATATTGAAGATCCATTTGATACTAAGCACAA
TCCTGGATAAAAAACTCAAAACAAATAAGAATAATATAAACAGGCCTTTGATGATGCTTT
AAATTAAATTGAAAGTAAGTAATATAATCTGCTATTCTCATCTAAATGAAAAATGTTAAT
ATCTAACTAATATGACAAGCTAGCTTAAACATTAATTTTCAATTCTAATATCTTAAATTA
AAGAATTAAATATGCTTTAAATATTTTCATTACTGTATTTTTTCAATTTTTATGTAAAAA
TCATTTTTTAACTTATTTTAAATTTACTTTTAAAATATTAAATTAATTTTT



>TTHERM_00094040(protein)
MNINLTDKQKIYSNVIKNALEKIYKNDKVDILNLINTSLGCQTIEIKYDVEFHQLLAQYF
QNMRYQDTKDKEDVLQKLLEQCLSQNLILNTQKSKLSKQIIILKRLRRIQQKLKDDPKNA
LDHLIEEYDQEEENCDEEVLLQRFEQDKTDLRMQIEDNVKDLKKENIKYLLLKKQNNQEK
NIQNEQNLEQILLDVYNQQKIEESFSKRLLQEVNFIRKIISMMRLKELFGLEYVTVQPYG
SIVSGFAQKSSDVDISINTNCYIDESSFIQLLHNFIKQYCSNKSIKNVETEPVLQAQTPL
LKYTRKDTVDQQQIKIDIDICVNNILGCTNSLMLYTLSQLHPKIQQLGIIIKHWAKQRGV
SSKSHLSSYSFILMMFSFLFREKILNSEFVKKSKSKENQCQVKIKRKKKDGEQIFQTNLY
FYSNVEDLKMKLAIWRKEKNLPSLDDVSLSQLFIDFIKFYQSSFNFKDKRFISIFNFDVN
YSNNNFKYELYDENYYFNIEDPFDTKHNPGQKTQNKQEQYKQAFDDALNQIESKQYNLLF
SSK