Identifiers and Description

Gene Model Identifier

TTHERM_00131110

Standard Name

RPS18 (Ribosomal Protein of the Small subunit 18)

Aliases

PreTt24232 | 10.m00281 | 3698.m00005

Description

RPS18 40S ribosomal protein S18 putative; Homolog of yeast RPS18- human RPS18- bacterial RPS13

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• RNA binding (IEA) | GO:0003723
• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00416 ) Ribosomal protein S13/S18
• ( PF00633 ) Helix-hairpin-helix motif

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_05676.1	1.0003602942354155e-110
	Description: ribosomal protein S13p/S18e containing protein (214 aa)
Tetrahymena borealis	EI9_12499.1	1.0003602942354155e-110
	Description: hypothetical protein (250 aa)
WormBase	WBGene00004487	9.999353957415832e-59
	Description: locus:rps-18 status:Confirmed UniProt:O18240 protein_id:CAB16517.1
WormBase	WBGene00009201	9.999353957415832e-59
	Description: status:Partially_confirmed UniProt:H2L2C5 protein_id:CCE72265.1
SGD	YML026C	1.0000099287337047e-53
	Description: RPS18B Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Ap and has similarity to E. coli S13 and rat S18 ribosomal proteins
Oxytricha	Contig19625.0.g104	4.999934616708877e-52
	Description: Ribosomal protein S13/S18
DictyBase	DDB_G0276415	2.000214949834694e-50
	Description: rps18 on chromosome: 2 position 6891141 to 6891920
Stentor Coeruleus	SteCoe_37993	3.532628572200807e-24
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00131110(coding)
ATGTCCTTCGTTATCGAAAAAGAATCTGACTTCAAGTACATCCATCGTATCCTCAACACC
AACATCGATGGTAAAAGAATCACCCCTATTGCCTTAACCGGTATTAGAGGTATCGGCAGA
AGATTCGCTTACATCATCTGCAAGGTTTTGAAGATCGATCCCAACGCCAGAGCTGGTTTA
TTAACCGAAGATTAATGCAACAAGATTACCGATCTCATCGCTGATCCCGAAGCTCACGGT
ATCCCCACCTGGTTGCTCAACAGAATTAATGATTTCAAGGATGGTAAAAACTACCAAATG
GCTTCTAACACCTTAGATACCAAGATGAGAGAAGATCTTGAAAGACTCAAGAAAATTAAG
TCTCACAGAGGTCTTAGACATTTCTGGGGTCTCAAGGTTAGAGGTCAACACACCAAGACC
AGTGGTAGACACGGTGTCGTTTGCGGTGTTGTCAGAAAGAACAAATGA

>TTHERM_00131110(gene)
ATGTCCTTCGTTATCGAAAAAGAATCTGACTTCAAGTACATCCATCGTATCCTCAACACC
AACATCGATGGTAAAAGAATCACCCCTATTGCCTTAACCGGTATTAGAGGTATCGGCAGA
AGATTCGCTTACATCATCTGCAAGGTTTTGAAGATCGATCCCAACGCCAGAGCTGGTTTA
TTAACCGAAGATTAATGCAACAAGATTACCGATCTCATCGCTGATCCCGAAGCTCACGGT
ATCCCCACCTGGTTGCTCAACAGAATTAATGATTTCAAGGATGGTAAAAACTACCAAATG
GCTTCTAACACCTTAGATACCAAGATGAGAGAAGATCTTGAAAGACTCAAGAAAATTAAG
TCTCACAGAGGTCTTAGACATTTCTGGGGTCTCAAGGTTAGAGGTCAACACACCAAGACC
AGTGGTAGACACGGTGTCGTTTGCGGTGTTGTCAGAAAGAACAAATGA

>TTHERM_00131110(protein)
MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL
LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK
SHRGLRHFWGLKVRGQHTKTSGRHGVVCGVVRKNK