Identifiers and Description

Gene Model Identifier

TTHERM_00134940

Standard Name

RPL25 (Ribosomal Protein of the Large subunit #25)

Aliases

PreTt24318 | 10.m00367 | 3698.m00088 | RPL23A

Description

RPL25 60S ribosomal protein L23a; Homolog of Yeast RPL25- Human RPL23A- Bacteria RPL23; Ribosomal protein L23 containing protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00276 ) Ribosomal protein L23
• ( PF03939 ) Ribosomal protein L23, N-terminal domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_05760.1	3.999498296699862e-96
	Description: ribosomal protein L23 containing protein (151 aa)
Oxytricha	Contig1434.1.g123	2.0003218023735366e-33
	Description: Ribosomal protein L23
WormBase	WBGene00004439	6.99868990988981e-32
	Description: locus:rpl-25.2 60S ribosomal protein L23a 2 status:Confirmed UniProt:Q20647 protein_id:CAA99858.1
WormBase	WBGene00007194	6.99868990988981e-32
	Description: Diphthine synthase status:Confirmed UniProt:Q17514 protein_id:CAA90089.1
SGD	YOL127W	6.002270911168926e-31
	Description: RPL25 Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarity to E. coli L23 and rat L23a ribosomal proteins; binds to 25S rRNA via a conserved C-terminal motif
DictyBase	DDB_G0293502	2.000620012690291e-23
	Description: rpl23a on chromosome: 6 position 2967908 to 2968721
Stentor Coeruleus	SteCoe_30033	0.000000000000004658886145103398
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00134940(coding)
ATGAACAAGGAAAACAAGACTCAAGCTGTTAACAAGGCCAAGAACACCGCCAAGGTTGCC
AAGAAGGGATCTTCCATCACCAAGCACAAGACCTACACTGGTGTTAGATTCTTCAGACCC
AAAACCTTATAATTAGCTAAGGCTCCCAAGTACTCCAGAACCGTCAGAGCTCACCTTAAG
GTTTCTGGTCACTTAGATAACCACTCTGTCGTCAAGACCCCCTTGACCACTGAAAAGGCC
ATGAAAAAGATGGAAGACGAAAACACTATGGTTTTCTACGTCCACAACAGATCTACCAAG
CCTTAAATTAAGTCTGCTTTCGAAAAGCTCTACAACGTTAAGGTTAGATCCGTCAACACC
CTTAATACTATCACTGGTAACAAGAAGGCCTACATCAGATTAGCTGCTGATTCTGACTCT
CTTACCCTTGCCAACAAGATCGGTCTCATATGA

>TTHERM_00134940(gene)
ATGAACAAGGAAAACAAGACTCAAGCTGTTAACAAGGCCAAGAACACCGCCAAGGTTGCC
AAGAAGGGATCTTCCATCACCAAGCACAAGACCTACACTGGTGTTAGATTCTTCAGACCC
AAAACCTTATAATTAGCTAAGGCTCCCAAGTACTCCAGAACCGTCAGAGCTCACCTTAAG
GTTTCTGGTCACTTAGATAACCACTCTGTCGTCAAGACCCCCTTGACCACTGAAAAGGCC
ATGAAAAAGATGGAAGACGAAAACACTATGGTTTTCTACGTCCACAACAGATCTACCAAG
CCTTAAATTAAGTCTGCTTTCGAAAAGCTCTACAACGTTAAGGTTAGATCCGTCAACACC
CTTAATACTATCACTGGTAACAAGAAGGCCTACATCAGATTAGCTGCTGATTCTGACTCT
CTTACCCTTGCCAACAAGATCGGTCTCATATGA

>TTHERM_00134940(protein)
MNKENKTQAVNKAKNTAKVAKKGSSITKHKTYTGVRFFRPKTLQLAKAPKYSRTVRAHLK
VSGHLDNHSVVKTPLTTEKAMKKMEDENTMVFYVHNRSTKPQIKSAFEKLYNVKVRSVNT
LNTITGNKKAYIRLAADSDSLTLANKIGLI