Identifiers and Description

Gene Model Identifier

TTHERM_00136120

Standard Name

RPL6 (Ribosomal protein of the large subunit)

Aliases

PreTt24337 | 10.m00386 | 3698.m00105

Description

RPL6 60S ribosomal protein L6; Ribosomal protein L6e family

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00467 ) KOW motif
• ( PF01159 ) ribosomal protein L6e
• ( PF07813 ) LTXXQ motif

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_05779.1	1.9999788875029746e-125
	Description: 50S ribosomal protein L6e (192 aa)
Oxytricha	Contig22227.0.g51	1.0000099287337047e-53
	Description: Ribosomal protein L6e
SGD	YLR448W	2.9994376937714457e-52
	Description: RPL6B Protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Ap and to rat L6 ribosomal protein; binds to 5.8S rRNA
DictyBase	DDB_G0292460	2.0008536325002377e-42
	Description: rpl6 on chromosome: 6 position 1676096 to 1677186
WormBase	WBGene00004417	6.997646692526315e-42
	Description: locus:rpl-6 60S ribosomal protein L6 status:Confirmed UniProt:P47991 protein_id:CCD70755.1
Stentor Coeruleus	SteCoe_26406	7.781132241133797e-20
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00136120(coding)
ATGGCTAGAGGTCCTGCTGGTAAAAACAGAGGTGTTTCAAAGATCTCCAAGTGGTACAAG
GCTGATGATGAAGCCACCCCCTTCCACAGAAGACAACTTAAGAAGGCTACCGCCACCAAG
TTGAGAAACGACATCGCCCCTGGTACCGTTCTCATCCTCCTCGCTGGTAGATTCAGAGGT
AAGAGAGTCGTCTTCCTTAAGCAACTCAAGTCTGGCTTGTTGTTGGTCACCGGTCCCTAC
AAGGTTAACGGTGTCCCCTTGAAGAGAGTCAACTAAGCTTACACTCTTTCTACCTCCACC
AAGGTTGATCTTACCGGTGTTAACACTGCTAAGTTCGAAGATGACTACTTCGGTAGAGAA
AAGGCCAGAAAGAACCACAAGAACCTTTTCAAGGCTGAATTGACCGAAGAATAAAAGAAG
AAGGAAACCGAAAGAAAGAATGCTAGAAAGCAAGACTAACAAGCTGTCGATACTCCTCTT
CTCGCTGCCGTCAAGAAGGTTGAATTCTTAAAGAACTATCTTGCCTCCAAGTTCACCTTA
AATAACAACGACAGACCCCACGAAATGAAGTTCTGA

>TTHERM_00136120(gene)
ATGGCTAGAGGTCCTGCTGGTAAAAACAGAGGTGTTTCAAAGATCTCCAAGTGGTACAAG
GCTGATGATGAAGCCACCCCCTTCCACAGAAGACAACTTAAGAAGGCTACCGCCACCAAG
TTGAGAAACGACATCGCCCCTGGTACCGTTCTCATCCTCCTCGCTGGTAGATTCAGAGGT
AAGAGAGTCGTCTTCCTTAAGCAACTCAAGTCTGGCTTGTTGTTGGTCACCGGTCCCTAC
AAGGTTAACGGTGTCCCCTTGAAGAGAGTCAACTAAGCTTACACTCTTTCTACCTCCACC
AAGGTTGATCTTACCGGTGTTAACACTGCTAAGTTCGAAGATGACTACTTCGGTAGAGAA
AAGGCCAGAAAGAACCACAAGAACCTTTTCAAGGCTGAAGTAAGATTGTTTATAATTTTA
TAACCAAGAGGAAAAAAGGAATGACGCAAAGAAACAAACAAATCAAAAAAGTTTCATATC
GATTCATTTCTTAAAAAATAAATAATTTAATACTCTTCACTTAAATTATTGTTTAAGGAA
GATTTTATTAAAAGTATCTATTCTAAATATGAAAAATAAATAGATAGATACATAGCATAT
TTTTGTTTAACTATTTTCATTCTTCATATTTAATTCTTGAATAAAAATCAAGATTAATAT
TCTAAGCACGCTATTAGCAGAAAGATAAAGTGAAACTTTCGCAAAGCTTACAGAAATAGC
AAAATAAGTTTGAAAAGCTTCTACTAATGAATATTTTATTCAATAATATTTCATTTATTA
TCTTATGAATGAATGAATAAAATAAATTTGTTTCGTTTTCAATAGAAATTAGATTTATTA
AAAGAGAAGTGGATAAAGCAAAATATATCCATAAATGCTATTAATTATCAATTTCTTATG
TGTATTATGTTTGATTAGTTAAATCTAAGGAGAAACATAATATGGGAATATGGATTTTGA
GTATTCTTTTGTAGTTATTAAAGTATTAGCAGTCTATATTGATAATAAGTAAAGTTAATA
TTAAGATGGAAGCATTAATATTTATAACTTACAAAAAGAAAAATAAGCATTAGGAGGTTT
ATTAAGTATTTAATAGCCACGAATTAAACTATTTGCTTAAGCCATAAAACGACAAAAAAT
GCCATTAGTAAAATAAAGCATTTCAAAATAATTAGAATAATAAAACAAAATACATTGAAG
AATAACTAAAAAAATAGTTAAACAAATTATGCATTTGCATTCTTAATTGAAAGCATTAAG
TGGATCGTATTAATATTGTAATATGAAATCAGAAAGATATCCGTTCATTTAAAAGCTCGT
TTATTCATTCTGTTTGAATATTATAAATAAGAATATCGATCTGCACCTCTTGAAATTAGT
AAAAATGTATATTACATGAATGATTTTTATTTTCAAAAGTTGACCGAAGAATAAAAGAAG
AAGGAAACCGAAAGAAAGAATGCTAGAAAGCAAGACTAACAAGCTGTCGATACTCCTCTT
CTCGCTGCCGTCAAGAAGGTTGAATTCTTAAAGAACTATCTTGCCTCCAAGTTCACCTTA
AATAACAACGACAGACCCCACGAAATGAAGTTCTGA

>TTHERM_00136120(protein)
MARGPAGKNRGVSKISKWYKADDEATPFHRRQLKKATATKLRNDIAPGTVLILLAGRFRG
KRVVFLKQLKSGLLLVTGPYKVNGVPLKRVNQAYTLSTSTKVDLTGVNTAKFEDDYFGRE
KARKNHKNLFKAELTEEQKKKETERKNARKQDQQAVDTPLLAAVKKVEFLKNYLASKFTL
NNNDRPHEMKF