Identifiers and Description

Gene Model Identifier

TTHERM_00152050

Standard Name

TFB2 (RNA polymerase II transcription factor B subunit 2)

Aliases

PreTt20863 | 12.m00537 | 3700.m00256

Description

TFB2 general transcription factor IIH subunit; general transcription factor IIH subunit 2

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• zinc ion binding (IEA) | GO:0008270

Biological Process

• DNA repair (IEA) | GO:0006281
• regulation of transcription (IEA) | GO:0045449

Domains

• ( PF00097 ) Zinc finger, C3HC4 type (RING finger)
• ( PF04056 ) Ssl1-like
• ( PF07975 ) TFIIH C1-like domain
• ( TIGR00622 ) transcription factor ssl1
• ( TIGR01492 ) Plasmodium falciparum CPW-WPC domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_05153.1	9.997093137033517e-262
	Description: transcription factor ssl1 family protein (375 aa)
DictyBase	DDB_G0272362	4.998233068678632e-48
	Description: gtf2h2 on chromosome: 2 position 1296713 to 1298183
Oxytricha	Contig14857.0.g41	9.997441244797434e-45
	Description: Ssl1-like
WormBase	WBGene00011814	5.000680012816624e-42
	Description: General transcription factor IIH subunit 2 status:Confirmed UniProt:P34567 protein_id:CAA83139.3
Tetrahymena borealis	EI9_03400.1	5.000680012816624e-42
	Description: BAL-associated protein (411 aa)
SGD	YLR005W	1.999683289470905e-41
	Description: SSL1 Component of the core form of RNA polymerase transcription factor TFIIH, which has both protein kinase and DNA-dependent ATPase/helicase activities and is essential for transcription and nucleotide excision repair; interacts with Tfb4p

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00152050(coding)
ATGGATATTGAAGAAGCAGATAGAAGATCAATTATTGATTTCGTAGAATAAAAACTAAAT
ATTAAAGAAGAAAATCCTTTAATACAAACAAAGAAAATCATCGATAAAGGATATACCTCT
ACAACAAAAAAGAGTCTCCTAAGATTTGTATATATTATAGTTGATACAACCTAATCTTCT
ACAAGAGTAGATTTCAAGCCTTCGAGAATAGGACTAACGTAAATCTACTTAAAGAACTTC
ATAAAAAACTTTTTTGATTCTAATCCTTTGAGTGTATTATCTATTGGTAAAACATAAAAT
GGCTAGTGTATAACTCTTTAAGAATTTACATCTAGTATATCTCTTTTAGATAAAACAATC
GAAAAACTTGTAGTTGATGAAAAGGAGGATTTTTCTCTTTTTGAATGTTTAAATGAAACT
TTTAATATTTTTGCTGAAGCACCTCCATATGCTTTCAGAGAAGTAGTTCTAATTTAGTCA
ACACCTTCAACAAAAGATAAAGGTGATATAAATGAATAAATAAATAAAGCCAAATAATGC
AAAATAACTTTTAATATTATATCACTTAATGCAAAAACATTCATATTTTAGAAATTGACA
AAAGAGACATAAGGTAAATATGACACAGCTTTACATGAAAAAGATTATGAAAATTTACTT
AACAGCTATTGTGAACCTCCATAATAAATATTAAATAAAACTGAAAAAACTCTTATACAA
GTTGGTTTCCCTAATAAAAAATATTCTAAAATTTCTGTATTATGTGCTTGCCATATGGAG
TTAAAAACTAACTTTTACATTTGCCCTTAATGCAAAAGTAAAAACTGTGAAGTTCCTTCA
AAATGTTCAGGATGCCAATTAAATTTAATTCTTCCTTTGCATATCACAAAGAGCTATCAT
TTTAGTTAAAATTTAAAAGAATTCGAATTGTTAGGACAAGAAAAATCTAATAATAGTATG
GAAACCGAGTAAGATAAAACATAAAATATCCTTTGTAATGGATGCTCTGAAGATATTAAA
GAAGATTACTTCTCAAAATGTTAAAATTGTAAATCAATATTCTGCTTGGAATGTGATATT
TTAATACACAAGCAAAAGCTAAATTGTCCTAAATGTTGA

>TTHERM_00152050(gene)
ATGGATATTGAAGAAGCAGATAGAAGATCAATTATTGATTTCGTAGAATAAAAACTAAAT
ATTAAAGAAGAAAATCCTTTAATACAAACAAAGAAAATCATCGATAAAGGATATACCTCT
ACAACAAAAAAGAGTCTCCTAAGATTTGTATATATTATAGTTGATACAACCTAATCTTCT
ACAAGAGTAGATTTCAAGCCTTCGAGAATAGGACTAACGTAAATCTACTTAAAGGTAATA
ATATTGCATTCAAAATTTTTAATTTATAAAAAATTAATATTATTTTTAATATTAATTAGA
ACTTCATAAAAAACTTTTTTGATTCTAATCCTTTGAGTGTATTATCTATTGGTAAAACAT
AAAATGGCTAGTGTATAACTCTTTAAGAATTTACATCTAGTATATCTCTTTTAGATAAAA
CAATCGAAAAACTTGTAGTTGATGAAAAGGAGGATTTTTCTCTTTTTGAATGTTTAAATG
TAAATTTATAAATTTCTTTTGAATGTTTGTGAATAAAATATTTTTTAAGACCAAATCTTT
ATCTAAAAAACATTTAAAATAAAGGAAACTTTTAATATTTTTGCTGAAGCACCTCCATAT
GCTTTCAGAGAAGTAGTTCTAATTTAGTCAACACCTTCAACAAAAGATAAAGGTGATATA
AATGAATAAATAAATAAAGCCAAATAATGCAAAATAACTTTTAATATTATATCACTTAAT
GCAAAAACATTCATATTTTAGGTAAATAGATTTTAAATTTATACATTGCACAAACCATGC
AAAACTCTATATTTAATAGAAATTGACAAAAGAGACATAAGGTAAATATGACACAGCTTT
ACATGAAAAAGATTATGAAAATTTACTTAACAGCTATTGTGAACCTCCATAATAAATATT
AAATAAAACTGAAAAAACTCTTATACAAGTTGGTTTCCCTAATAAAAAATATTCTAAAAT
TTCTGTATTATGTGCTTGCCATATGGAGTTAAAAACTAACTTTTACATTTGCCCTTAATG
CAAAAGTAAAAACTGTGAAGTTCCTTCAAAATGTTCAGTAACTAATTTTTTAGAATTTTT
AAAAATTTACAAGTTTTTATTAAATTTACTAATAAGGGATGCCAATTAAATTTAATTCTT
CCTTTGCATATCACAAAGAGCTATCATTTTAGTTAAAATTTAAAAGAATTCGAATTGTTA
GGACAAGAAAAATCTAATAATAGTATGGAAACCGAGTAAGATAAAACATAAAATATCCTT
TGTAATGGATGCTCTGAAGATATTAAAGAAGATTACTTCTCAAAATGTTAAAATTGTAAA
TCAATATTCTGCTTGTAAATTAATTGTTTTATTCACACAAGCAACTTTTTAACAATTTTT
TAACTAAATTTTATAGGGAATGTGATATTTTAATACACAAGCAAAAGCTAAATTGTCCTA
AATGTTGA

>TTHERM_00152050(protein)
MDIEEADRRSIIDFVEQKLNIKEENPLIQTKKIIDKGYTSTTKKSLLRFVYIIVDTTQSS
TRVDFKPSRIGLTQIYLKNFIKNFFDSNPLSVLSIGKTQNGQCITLQEFTSSISLLDKTI
EKLVVDEKEDFSLFECLNETFNIFAEAPPYAFREVVLIQSTPSTKDKGDINEQINKAKQC
KITFNIISLNAKTFIFQKLTKETQGKYDTALHEKDYENLLNSYCEPPQQILNKTEKTLIQ
VGFPNKKYSKISVLCACHMELKTNFYICPQCKSKNCEVPSKCSGCQLNLILPLHITKSYH
FSQNLKEFELLGQEKSNNSMETEQDKTQNILCNGCSEDIKEDYFSKCQNCKSIFCLECDI
LIHKQKLNCPKC