Identifiers and Description

Gene Model Identifier

TTHERM_00161050

Standard Name

PRP19 (Pre-mRNA-splicing factor 19)

Aliases

PreTt28497 | 13.m00456 | 3829.m01318

Description

PRP19 Pre-mRNA-processing factor putative; Pre-mRNA-splicing factor

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• ubiquitin ligase complex (IEA) | GO:0000151

Molecular Function

• ubiquitin-protein transferase activity (IEA) | GO:0004842

Biological Process

• protein ubiquitination (IEA) | GO:0016567

Domains

• ( PF00400 ) WD domain, G-beta repeat
• ( PF04564 ) U-box domain
• ( PF06739 ) Beta-propeller repeat
• ( PF08606 ) Prp19/Pso4-like
• ( TIGR03185 ) DNA sulfur modification protein DndD

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_05362.1	9.997093137033517e-262
	Description: hypothetical protein (509 aa)
WormBase	WBGene00020423	2.998830401637127e-79
	Description: locus:prp-19 Pre-mRNA-processing factor 19 homolog status:Confirmed UniProt:Q10051 protein_id:CCD72869.1
DictyBase	DDB_G0276803	6.001182358613152e-70
	Description: prp19 on chromosome: 2 position 7360384 to 7362414
Oxytricha	Contig22546.0.g71	1.0002012508493003e-67
	Description: Prp19/Pso4-like
SGD	YLL036C	8.000124778438792e-23
	Description: PRP19 Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiquitin ligases, and a WD40 domain
Stentor Coeruleus	SteCoe_18304	7.781132241133797e-20
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00161050(coding)
ATGTCTTGGAATTATTGTGCTATAACTGGAGAATAGCTTCATGAACCCGTAGTTTCAAAA
AAGAGCGGTCATGTTTTTGAAAAAAGAGTTATTGAAAAACATATTTAATCAACTGGTTAA
TGCCCAATTACTGGCTAAGCCTTAAGCAACGATGATTTGATTCCAGTTTAATTAAATGTC
TAAACTAAACCTAGATCTGTCACTTCAAATTCTATTCCTGGAATATTAAAAACATTTTAG
AACGAATGGGATGCATTAATGCTCGAAACTTATAATTTAAAATAACATTTGGAAACAGTT
CGTTAAGAGCTCTCCCATGCTCTTTACTAGCATGATGCTGCCTGTAGAGTTATTGCTCGT
TTGATCAAAGAAAGAGATGAAGCTAGATTTGAAGTTGCCTAGCTTTAAGAAAAGTTAAGA
TAAGGTAAAATGGAATTAGAAGAAGCAGATGCTTAAAATGAATAATAACAAGAGCAAACA
AACAATAAGCTTCCTTAAAATATTATTGATTCAATTAATGAAACAGCTTTAAAGTTAAAC
TAAATAAGAAAAGATAGAAAGAAAGATGCTGAATACAATAGCAAGTTTGCAGCTACTGAG
GTCATTTCGAGCTATGGTCCTAAGGAAACTGTTGGCTTACATAGTACTACAAACCCTGGA
ATTAATGCTTTAGATTATAATCGTTAGAGAAATTTAGTTATTAGTGGTGGTAAAGACGGA
TCTGTTATCCTTTACAATACTGTTTAAAATGTTATTGAAGGAACAGTGGAATTAAATAAA
CATATTGTTGCCTTGACATTTTTAGGAAACGATGAAAATCCCCACTTTGTTGCTGTTACT
GAACACGCAGCTCATCTCTACTAATTCTAAGCTGAAAATAAATAATTTAATAGTTTATAT
ACCTACAACACTAATTCTTCATTTACCTCTGTTTCTGCTCATCCTAACGGATCTCTATTC
GTACTTTCTGCCAAAGACGGTTCAGTAACATACCATGATGCAATTTCTGCTTCTCTCGTT
TTAGAAGTTAATGATTTAGTTGGAAAGCTCAGTGTTAACAGTATTTAAGTACATCCTGAT
GGTAACCTTCTTGGTATCGGATGTAGTGATGGCTCAGTTAAATTGTGGAATATATCTTCT
AACGAAATAATGACATCTTTGGAAGACAATGTCAATGGAGCAATAGACTTGATCAGTTTT
AGTGAAAACGGTTATATTTTATCAGTAGGTAGTACAGTTAGTAAAGTAGTAAAGATCTAC
GATTTAAGAAAAGCTAAGTGCATTAAAACTTTGTTTGGTGAAGGAGATGAATTTTCTTTG
TCAAGCATTGAATTTGACCTTTCTGGTAATGTATTTGCTGCTGGTTCTACTACAGGATAA
ATAAAACTCTACGAAACTAAGAAATGGAACCACCTTTCAACATTCTCTTATCATACAGCT
GCCGTTAAATCTTTGAAGTTTGGTAATTTCTCAAAAGAATTAGTTTCTGGTTCTTTGGAT
AGAAATTTAATTATTTCTTCGTAATGA

>TTHERM_00161050(gene)
ATGTCTTGGAATTATTGTGCTATAACTGGAGAATAGCTTCATGAACCCGTAGTTTCAAAA
AAGAGCGGTCATGTTTTTGAAAAAAGAGTTATTGAAAAACATATTTAATCAACTGGTTAA
TGCCCAATTACTGGCTAAGCCTTAAGCAACGATGATTTGATTCCAGTTTAATGTAATTAT
TTATCAATAGTCTAGCTTAATTTACAATTAAAATATATAGCATAAGTTTACAATTTTGAT
TCTTTCAATCAAGTTGAAAAGAAGACATTTATATTATCAATTTGATATAATTTTGCATTT
ATAATAAATTTATTATTAATAAAAAAATTAGTAAATGTCTAAACTAAACCTAGATCTGTC
ACTTCAAATTCTATTCCTGGAATATTAAAAACATTTTAGAACGAATGGGATGCATTAATG
CTCGAAACTTATAATTTAAAATAACATTTGGAAACAGTTCGTTAAGAGCTCTCCCATGCT
CTTTACTAGCATGATGCTGCCTGTAGAGTTATTGCTCGTTTGATCAAAGAAAGAGATGAA
GCTAGATTGTAAACAAACAAATATATTATTATTATTTCTCAATTAAACATTTAAGTGAAG
ATCTGCTTAAATATCAAAACAATAGAATTTAAATTTATTTTAATAAGCCTTGAAGCTATT
GTGGATTAATATTAATTTATTTTTATTCAAAATTAGTGAAGTTGCCTAGCTTTAAGAAAA
GTTAAGATAAGGTAAAATGGAATTAGAAGAAGCAGATGCTTAAAATGAATAATAACAAGA
GCAAACAAACAATAAGCTTCCTTAAAATATTATTGATTCAATTAATGAAACAGCTTTAAA
GTTAAACTAAATAAGAAAAGATAGAAAGAAAGATGCTGAATACAATAGCAAGTTTGCAGC
TACTGAGGTAAATAATATATACATATATGATATGAATTTAGCTTTTATAGCTTGAAATAT
AGATTAATGTTTTCTAATAAATGTAAATTTTAGGTCATTTCGAGCTATGGTCCTAAGGAA
ACTGTTGGCTTACATAGTACTACAAACCCTGGAATTAATGCTTTAGATTATAATCGTTAG
AGAAATTTAGTTATTAGTGGTGGTAAAGACGGATCTGTTATCCTTTACAATACTGTTTAA
AATGTTATTGAAGGAACAGTGGAATTAAATAAACATATTGTTGCCTTGACATTTTTAGGA
AACGATGAAAATCCCCACTTTGTTGCTGTTACTGAACACGCAGCTCATCTCTACTAATTC
TAAGCTGAAAATAAATAATTTAATAGTTTATATACCTACAACACTAATTCTTCATTTACC
TCTGTTTCTGCTCATCCTAACGGATCTCTATTCGTACTTTCTGCCAAAGACGGTTCAGTA
ACATACCATGATGCAATTTCTGTAAAATTTTAAATGAGATAATTTTTTACTAATTTTAAA
TGTAAATATCAAATAGGCTTCTCTCGTTTTAGAAGTTAATGATTTAGTTGGAAAGCTCAG
TGTTAACAGTATTTAAGTACATCCTGATGGTAACCTTCTTGGTATCGGATGTAGTGATGG
CTCAGTTAAATTGTGGAATATATCTTCTAACGAAATAATGACATCTTTGGAAGACAATGT
CAATGTATAAAAATTTTTAAATAGTATTATTGTATTAAATTATTCTTAAAAATTGAAATA
GGGAGCAATAGACTTGATCAGTTTTAGTGAAAACGGTTATATTTTATCAGTAGGTAGTAC
AGTTAGTAAAGTAGTAAAGATCTACGATTTAAGAAAAGCTAAGTGCATTAAAACTTTGTT
TGGTGAAGGAGATGAATTTTCTTTGTCAAGCATTGAATTTGACCTTTCTGGTAATGTATT
TGCTGCTGGTTCTACTACAGGATAAATAAAACTCTACGAAACTAAGAAATGGAACCACCT
TTCAACATTCTCTTATCATACAGCTGCCGTTAAATCTTTGAAGTAAAATACTTGTTTATC
AAAAAAATTTAAATTAATTAATTGTTATTAATGTATTAAAGGTTTGGTAATTTCTCAAAA
GAATTAGTTTCTGGTTCTTTGGATAGAAATTTAATTATTTCTTCGTAATGA

>TTHERM_00161050(protein)
MSWNYCAITGEQLHEPVVSKKSGHVFEKRVIEKHIQSTGQCPITGQALSNDDLIPVQLNV
QTKPRSVTSNSIPGILKTFQNEWDALMLETYNLKQHLETVRQELSHALYQHDAACRVIAR
LIKERDEARFEVAQLQEKLRQGKMELEEADAQNEQQQEQTNNKLPQNIIDSINETALKLN
QIRKDRKKDAEYNSKFAATEVISSYGPKETVGLHSTTNPGINALDYNRQRNLVISGGKDG
SVILYNTVQNVIEGTVELNKHIVALTFLGNDENPHFVAVTEHAAHLYQFQAENKQFNSLY
TYNTNSSFTSVSAHPNGSLFVLSAKDGSVTYHDAISASLVLEVNDLVGKLSVNSIQVHPD
GNLLGIGCSDGSVKLWNISSNEIMTSLEDNVNGAIDLISFSENGYILSVGSTVSKVVKIY
DLRKAKCIKTLFGEGDEFSLSSIEFDLSGNVFAAGSTTGQIKLYETKKWNHLSTFSYHTA
AVKSLKFGNFSKELVSGSLDRNLIISSQ