Identifiers and Description
Gene Model Identifier
TTHERM_00188280Standard Name
RAB39 (RAB GTPase 39)Aliases
PreTt08578 | 15.m00289 | 3697.m00001Description
RAB39 Ras family small GTPase; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission eventsGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
External Links
Gene Ontology Annotations
Cellular Component
- intracellular anatomical structure (IEA) | GO:0005622
Molecular Function
- GTP binding (IEA) | GO:0005525
Biological Process
- small GTPase-mediated signal transduction (IEA) | GO:0007264
Domains
- ( PF00009 ) Elongation factor Tu GTP binding domain
- ( PF00025 ) ADP-ribosylation factor family
- ( PF00071 ) Ras family
- ( PF00350 ) Dynamin family
- ( PF01926 ) 50S ribosome-binding GTPase
- ( PF04548 ) AIG1 family
- ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
- ( TIGR00231 ) small GTP-binding protein domain
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al.,
2023)
GeneMania
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_06367.1 4.0002634815779907e-110 Description: Ras family protein (224 aa) DictyBase DDB_G0276399 3.0007793728221555e-22 Description: rab8B on chromosome: 2 position 6878753 to 6879364 Oxytricha Contig7494.0.g64 8.002082816694397e-20 Description: Ras family SGD YFL038C 1.9999391735788327e-19 Description: YPT1 Rab family GTPase, involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by protein geranylgeranyltransferase type II (Bet2p-Bet4p) WormBase WBGene00004273 4.998394530072393e-19 Description: locus:rab-10 status:Confirmed UniProt:Q94148 protein_id:CCD70773.1 WormBase WBGene00006940 4.998394530072393e-19 Description: locus:wee-1.3 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase wee-1.3 status:Confirmed UniProt:O18209 protein_id:CAB16484.1
General Information
No Data fetched for General Information
Associated Literature
- Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,
Sequences
>TTHERM_00188280(coding)
ATGAATAAAAGCATTTCATTAACTAGTAAAAAGCACTACAGTATTTTGTTGATAGGAGGT
ACTGGTGTAGGTAAATCATGCCTGAAAAATCGTATAATAAGAAAAAAATTTTAAACTGAA
ATAAGTACAGTAGGTGTAAATTAGCAACATTTAGACTACACTTATAAAAATAAGCAAATT
AAGCTGATGATTACTGATACTGCAGGATAGGAGTAATTTAAATCTATTACCAAATCATAT
TATAAAGATTGTTTTGCAGTCTTATTCTGTTTTTCGGGAGACTCACCTAGAAGCTTGAAA
GAAGCTGAACATTATGCAAGACAATTTTAAGTAAATTACTAAAATAGCAAGGCTCCTGAA
GGTTTTGCACCAATTTGCTTGTTCGTAAGAAACAAATGTGATATGTCTGAAAATATTTTC
ACTTAGAATGTTATAGATAACACTATAAATGGAATTTCAGAGTTGTATTAGGAATTCAAA
GGTTTCTAAAACATTAAGTTTTTTGAAGTAAGCGCTAAAGAAGGAACTAATACAGAAAGC
TTACTTTAGTATGTTGTTGAAGAACTAGACAAATAAAATGTATTCGATATAAAGGAATAG
AATGGAACTGTTATTCTCAATTAGAATTAGGATAAAAACTAGGAAAAAAATAATGAATCA
TCATCTTCTGGTTGTTGTAAATGA>TTHERM_00188280(gene)
ATGAATAAAAGCATTTCATTAACTAGTAAAAAGCACTACAGTATTTTGTTGATAGGAGGT
ACTGGTGTAGGTAAATCATGCCTGAAAAATCGTATAATAAGAAAAAAATTTTAAACTGAA
ATAAGTACAGTAGGTATTACACATTTATAATTAATTAGCTATTAATTTTAGTTTTCTAAT
TATATCATTTTAAATGAACTAAAAAAGGTGTAAATTAGCAACATTTAGACTACACTTATA
AAAATAAGCAAATTAAGCTGATGATTACTGATACTGCAGGATAGGAGTAATTTAAATCTA
TTACCAAATCATATTATAAAGATTGTTTTGCAGTCTTATTCTGTTTTTCGGGAGACTCAC
CTAGAAGCTTGAAAGAAGCTGAACATTATGCAAGACAATTTTAAGTAAATTACTAAAATA
GCAAGGCTCCTGAAGGTTTTGCACCAATTTGCTTGTTCGTAAGAAACAAATGTGATATGT
CTGAAAATATTTTCACTTAGAATGTTATAGATAACACTATAAATGGAATTTCAGAGTTGT
ATTAGGAATTCAAAGGTTTCTAAAACATTAAGTTTTTTGAAGTAAGCGCTAAAGAAGGAA
CTAATACAGAAAGCTTACTTTAGTATGTTGTTGAAGAACTAGACAAATAAAATGTATTCG
ATATAAAGGAATAGAATGGAACTGTTATTCTCAATTAGAATTAGGATAAAAACTAGGAAA
AAAATAATGAATCATCATCTTCTGGTTGTTGTAAATGA>TTHERM_00188280(protein)
MNKSISLTSKKHYSILLIGGTGVGKSCLKNRIIRKKFQTEISTVGVNQQHLDYTYKNKQI
KLMITDTAGQEQFKSITKSYYKDCFAVLFCFSGDSPRSLKEAEHYARQFQVNYQNSKAPE
GFAPICLFVRNKCDMSENIFTQNVIDNTINGISELYQEFKGFQNIKFFEVSAKEGTNTES
LLQYVVEELDKQNVFDIKEQNGTVILNQNQDKNQEKNNESSSSGCCK