Identifiers and Description

Gene Model Identifier

TTHERM_00190830

Standard Name

DRH1 (DExD/H box RNA helicase 1)

Aliases

PreTt08734 | 15.m00445 | 3697.m00156

Description

DRH1 DEAD/DEAH-box helicase; P68-like protein- putative

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Domains

  • ( PF00270 ) DEAD/DEAH box helicase
  • ( PF00271 ) Helicase conserved C-terminal domain
  • ( PF04851 ) type III restriction enzyme, res
  • ( TIGR00614 ) ATP-dependent DNA helicase, RecQ family
  • ( TIGR00643 ) ATP-dependent DNA helicase RecG
  • ( TIGR01389 ) ATP-dependent DNA helicase RecQ
  • ( TIGR01587 ) CRISPR-associated helicase Cas3

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

  • ( SD01850 ) Macronucleus: Neo3 cassette replaces part of 5’ end of coding
  • ( SD01851 ) Macronucleus: Neo3 cassette replaces part of 5’ end of coding
  • ( SD01944 ) Micronucleus: neo4 Macronucleus: neo4
  • ( SD01945 ) Micronucleus: Neo4 into 5’ end of coding of DRH1 Macronucleus: Neo4 into 5’ end of coding of DRH1
  • ( SD02139 ) Micronucleus: Neo4 into 5’ end of coding of DRH1
  • ( SD02140 ) Micronucleus: Neo4 into 5’ end of coding of DRH1
  • ( SD02141 ) Micronucleus: Neo4 into 5’ end of coding of DRH1
  • ( SD02142 ) Micronucleus: Neo4 into 5’ end of coding of DRH1
  • ( SD02594 ) Macronucleus: Neo3 cassette replaces part of 5’ end of coding
  • ( SD02595 ) Macronucleus: Neo3 cassette replaces part of 5' end of coding
  • ( SD02596 ) Macronucleus: Neo3 cassette replaces part of 5’ end of coding
  • ( SD02597 ) Macronucleus: Neo3 cassette replaces part of 5’ end of coding
  • ( SD02598 ) Micronucleus: neo4 Macronucleus: neo4
  • ( SD02599 ) Micronucleus: neo4 at 5’ end of coding, some coding remains Macronucleus: neo4 at 5’ end of coding, some coding remains

Homologs

Source Identifier Score
Tetrahymena borealis EI9_06214.1 9.997093137033517e-262
Description: P68-like protein (718 aa)
Oxytricha Contig21312.0.g80 6.002069467939404e-154
Description: DEAD/DEAH box helicase
SGD YNL112W 4.000899569014317e-153
Description: DBP2 Essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated mRNA decay and rRNA processing
DictyBase DDB_G0293168 9.003323285460187e-148
Description: ddx17 on chromosome: 6 position 2360817 to 2364250
WormBase WBGene00010260 2.0000211193600847e-137
Description: locus:ddx-17 status:Confirmed UniProt:Q9XUW5 protein_id:CAB04518.1
Stentor Coeruleus SteCoe_12603 5.96629836401057e-72
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:27793833: McDaniel SL, Zweifel E, Harris PK, Yao MC, Cole ES, Chalker DL (2016) DRH1, a p68-related RNA helicase gene, is required for chromosome breakage in Tetrahymena. Biology open 5(12):1790-1798

Sequences

>TTHERM_00190830(coding)
ATGATTAACTTATTAAAAATTAGTAGTAAGACTAAGTTAATTAGTAGTTTGAGCTCAAGT
GCTTCTGCATTTAAAATAATCAAACAAAATTCTGAAAATTTATAATTTCAAAAACTAATA
ACCAAATAATTATATCAAATGTCAAGATAAATCTAAAGCAATTCTAATAAGGGAGAAGGC
TCAGACTATGAGAGTCATCAAAGCTCCGACAACCAACAGAAATAAGGAAATGGCTACTTC
AATAACAGAAATGTCAATGGCCAAAATTAAAATGGCTACTAAAGCAATGGCTATAACAAT
AGAGGTGGATATCAAAAGAGCTACGGAACAAACAAGTACAATAACGGAAATGGCTATGGT
AACTCCAATGGTGGCTACTTCAATAACAACAATAAACCAAATGGATACTTCAATGCCAAT
AAAAAGTTTGGAAATGAAGAGCAAAAAACTAACGTAGATAATCAAAAACCTTACGGATAC
AACTAATAAAATAACAACTAGTCTAATAAGGACTTGAATAACAGCGGCTACAGTGATGAA
AATCACTTAGGTGAAAATTTACACGATATTGACTACACAAAGGTCGAGCTCAAGCCTTTC
TAAAAGGTTTTCTACTAAGTTGGTAAATCAATACATACTGATGAAGAAATTGCTACCTAC
TAAAGAGAGAAGGGTATTATAATCCGTTCAAAGCACAAAGAGGTTCCCTAACCTTTCATA
AAATGGAACGAAACCAAATTCCCCAAATATATTATGTCCGTAATAGAAGACAGCAAATTC
TCTGAACCTATGCCCATCTAAGCTCAGTCTTTCCCTATTGTGTTGAGTGGTCATGACTTG
ATAGGTATTGCTTAAACTGGTTCAGGAAAAACTCTTTCTTTCATGCTTCCTGCTCTTGTT
CATATTAATGCCCAAGATCCCGTAAAGCCAGGCGAAGGCCCTATTGCATTAGTTTTGGCT
CCAACCAGAGAATTGGCAAACTAAATATAAGAACAATGCTTCAAATTTGGCAGCAAATGC
AAAATTAGCAGTGTTTGTGTTTATGGTGGTGCCCCTAAGATTTACCAAGAAAAGGAACTC
CGTAATGGCTGCGATATTGTCATTGCTACTCCTGGTAGACTCATTGATTTCTTGGAAAGT
AATGTTATCGACTTGAAGAGAGTAACTTATCTTGTTCTCGATGAAGCCGATAGAATGCTT
GATATGGGTTTTGAACCTTCCATCAGAAAAATCGTTGGCTAAATCAGACCTGATAGATAA
ACTCTTATGTTCTCTGCTACTTGGCCTTAAACTGTTAGAAGACTTGCCCTTGATTTTTGT
CATGGAGATCCTATTCACATTCAAATTGGTGATATGGAAAACAACGTCAACAATGATATC
GATCAATAAGTTGAAATCATTGATAAAAGCCAAAAATACGATAGAGTTAAAGAAATTCTT
AGCACAATGACAAGATCTGATAAGACCATTATCTTTACTTAAACAAAGAAAGATTGTGAT
GATCTTAGCAAAGCTCTCTAAACTGACAATATAAGAAACATCTGTATCCATGGTGATAAA
TCCCAAAGAGATAGAGATAAAGTTATGGACCTCTTCAAAACTGGTAGAGTCAACACTTTA
ATTGCAACCGATGTTGCATCTAGAGGTCTTGATGTCAAGGACATTAAATTAGTTATTAAC
TATGATTTCCCTAAGCAAATCGAAGACTACGTACATAGAGTCGGTAGAACTGGAAGAGCA
GGTGCTTAAGGTAAAGCTATTTCATTCCTTGATCAATATGAAGACAAGAAGATTTCTAAG
GAATTAGTTGATGTCTTGAAGTAAAATAATTAAGAAATTAGTCAAGATCTTCTTGAACTC
TCTGAAGCAAACTACAAGGGTAATTACAGTAATAACTATAATAAGAACAGAAGTAGCAAG
CCTTACAGTGGTGGATACAATAATAACAGAAACTATTATGGAAATAATAACGAAATGGGT
TTCAGAAACAGCAATAATGGATTCTCTAACAATGGCTACCAAAATGGTAACAGCAACGGA
GGTTATAGAAGCCAATAGAACAATAATGGGTTCCAAAATAATAACTATAACCGTGACTTC
CCTAAGAGATAGGAAGATGGCAACGGTGGTTCTGAACAACCTAAGAAATTCGGTTTCTTC
AACCCAAAGAAAGACAACTGA


>TTHERM_00190830(gene)
ATGATTAACTTATTAAAAATTAGTAGTAAGACTAAGTTAATTAGTAGTTTGAGCTCAAGT
GCTTCTGCATTTAAAATAATCAAACAAAATTCTGAAAATTTATAATTTCAAAAACTAATA
ACCAAATAATTATATCAAATGTCAAGATAAATCTAAAGCAATTCTAATAAGGGAGAAGGC
TCAGACTATGAGAGTCATCAAAGCTCCGACAACCAACAGTAAGCATTTCAGTATTTTCTT
TCATAGCAACTTACATCCATAGCTTAAAATTTCATATTATGTCTAAGCTACTCCAAAGGA
AAACTAACTCTTTTTTACTAAGCAAGCTATGAAATCTTCATGATTTTAAAAATCTAAAAA
ATAAGGAGATATGAAAAAAAAATCAAGAATACATTCTCTAAAATAGTTTTTATCACAATA
AATTCCAATGATTTCATCTATAATTTAGAATTAACAACAGAAAATCTATCTAATTTAAGC
AGTTGGATGAAGAGTTTTTTGTTTGGAGCAGATATTTTGCTTTTTATTTTCTGACAAAAC
CATTCATTAACACAATATTATAAATTATAAAGGAAATAAGGAAATGGCTACTTCAATAAC
AGAAATGTCAATGGCCAAAATTAAAATGGCTACTAAAGCAATGGCTATAACAATAGAGGT
GGATATCAAAAGAGCTACGGAACAAACAAGTACAATAACGGAAATGGCTATGGTAACTCC
AATGGTGGCTACTTCAATAACAACAATAAACCAAATGGATACTTCAATGCCAATAAAAAG
TTTGGAAATGAAGAGCAAAAAACTAACGTAGATAATCAAAAACCTTACGGATACAACTAA
TAAAATAACAACTAGTCTAATAAGGACTTGAATAACAGCGGCTACAGTGATGAAAATCAC
TTAGGTGAAAATTTACACGATATTGACTACACAAAGGTCGAGCTCAAGCCTTTCTAAAAG
GTTTTCTACTAAGTTGGTAAATCAATACATACTGATGAAGAAATTGCTACCTACTAAAGA
GAGAAGGGTATTATAATCCGTTCAAAGCACAAAGAGGTTCCCTAACCTTTCATAAAATGG
AACGAAACCAAATTCCCCAAATATATTATGTCCGTAATAGAAGACAGCAAATTCTCTGAA
CCTATGCCCATCTAAGCTCAGTGTAAATATTTTTATAAATTGAATTTCTTTCTCTATGAC
ATTAGTTTGATAGACACTTGAAAATTTTTGTCAAGATGTTACAAACAAGAAATAGAAGAA
AAAGTATAAAATGTATGAATGTTCCTTCATACGTACTACGATAATTAAATGAATCAAAAT
TTGATTTAAATTGCAATGAAATTAAATCATTCAAACAAACTACGCTCATAAGTGATTAAA
TAAATGAGTATTTTATCTTTGATTTTATTAATTAGTCACTAAATTTATCTATGACTCACT
TAATCAATCAATCAATCGCTTAGAGAAAATTTTTTATCTCCCACCTTTAAATAAATAAAT
AATTAGCGTGTTAGATAAAAATTGATTTCAAACACAAATAAATCATATTTCCAATATTTA
ATTTTTCCTCTGAAAATTAATAATTTTGCATTCTCTTTATTTTCAAATTAATTATTTTAT
ATGCATTAATTATGAAACTAAGAAAATTGAATATGTAGCTAAATTTTCTTTTTCCCAACT
ACAAATTAATTAATTAATTAATTAAATTTTAAAACCCATTTTATACATCCCATTTTTTTG
ACAGATTTAAATATTTTTGATACTAAAATTAGTATTTTAATATATTTGTTTATTCATTCA
TAAATTAATTAATAATCACTCTATAATATAGCTTTCCCTATTGTGTTGAGTGGTCATGAC
TTGATAGGTATTGCTTAAACTGGTTCAGGAAAAACTCTTTCTTTCATGCTTCCTGCTCTT
GTTCATATTAATGCCCAAGATCCCGTAAAGCCAGGCGAAGGCCCTATTGCATTAGTTTTG
GCTCCAACCAGAGAATTGGCAAACTAAATATAAGAACAATGCTTCAAATTTGGCAGCAAA
TGCAAAATTAGCAGTGTTTGTGTTTATGGTGGTGCCCCTAAGATTTACCAAGAAAAGGAA
CTCCGTAATGGCTGCGATATTGTCATTGCTACTCCTGGTAGACTCATTGATTTCTTGGAA
AGTAATGTTATCGACTTGAAGAGAGTAACTTATCTTGTTCTCGATGAAGCCGATAGAATG
CTTGATATGGGTTTTGAACCTTCCATCAGAAAAATCGTTGGCTAAATCAGACCTGATAGA
TAAACTCTTATGTTCTCTGCTACTTGGCCTTAAACTGTTAGAAGACTTGCCCTTGATTTT
TGTCATGGAGATCCTATTCACATTCAAATTGGTGATATGGAAAACAACGTCAACAATGAT
ATCGATCAATAAGTTGAAATCATTGATAAAAGCCAAAAATACGATAGGTAAATAATAATT
ATTACTTAAATTTGACACATTATAATATCTAATTTATCATAAAGAGTTAAAGAAATTCTT
AGCACAATGACAAGATCTGATAAGACCATTATCTTTACTTAAACAAAGAAAGATTGTGAT
GATCTTAGCAAAGCTCTCTAAACTGACAATATAAGAAACATCTGTATCCATGGTGATAAA
TCCCAAAGAGATAGAGATAAAGTTATGGACCTCTTCAAAACTGGTAGAGTCAACACTTTA
ATTGCAACCGATGTTGCATCTAGAGGTCTTGATGTCAAGGACATTAAATTAGTTATTAAC
TATGATTTCCCTAAGCAAATCGAAGACTACGTACATAGAGTCGGTAGAACTGGAAGAGCA
GGTGCTTAAGGTAAAGCTATTTCATTCCTTGATCAATATGAAGACAAGAAGATTTCTAAG
GAATTAGTTGATGTCTTGAAGTAAAATAATTAAGAAATTAGTCAAGATCTTCTTGAACTC
TCTGAAGCAAGTAATTAATAACTTTAATTAATTTTCACCATCATTTATATTTATTTTCAC
AATTGAAAAGTTAAATATTTATTTATTCATATATTTTCCTCTAAAAAAAAAGACTACAAG
GGTAATTACAGTAATAACTATAATAAGAACAGAAGTAGCAAGCCTTACAGTGGTGGATAC
AATAATAACAGAAACTATTATGGAAATAATAACGAAATGGGTTTCAGAAACAGCAATAAT
GGATTCTCTAACAATGGCTACCAAAATGGTAACAGCAACGGAGGTTATAGAAGCCAATAG
AACAATAATGGGTTCCAAAATAATAACTATAACCGTGACTTCCCTAAGAGATAGGAAGAT
GGCAACGGTGGTTCTGAACAACCTAAGAAATTCGGTTTCTTCAACCCAAAGAAAGACAAC
TGA


>TTHERM_00190830(protein)
MINLLKISSKTKLISSLSSSASAFKIIKQNSENLQFQKLITKQLYQMSRQIQSNSNKGEG
SDYESHQSSDNQQKQGNGYFNNRNVNGQNQNGYQSNGYNNRGGYQKSYGTNKYNNGNGYG
NSNGGYFNNNNKPNGYFNANKKFGNEEQKTNVDNQKPYGYNQQNNNQSNKDLNNSGYSDE
NHLGENLHDIDYTKVELKPFQKVFYQVGKSIHTDEEIATYQREKGIIIRSKHKEVPQPFI
KWNETKFPKYIMSVIEDSKFSEPMPIQAQSFPIVLSGHDLIGIAQTGSGKTLSFMLPALV
HINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKISSVCVYGGAPKIYQEKEL
RNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEADRMLDMGFEPSIRKIVGQIRPDRQ
TLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQQVEIIDKSQKYDRVKEIL
STMTRSDKTIIFTQTKKDCDDLSKALQTDNIRNICIHGDKSQRDRDKVMDLFKTGRVNTL
IATDVASRGLDVKDIKLVINYDFPKQIEDYVHRVGRTGRAGAQGKAISFLDQYEDKKISK
ELVDVLKQNNQEISQDLLELSEANYKGNYSNNYNKNRSSKPYSGGYNNNRNYYGNNNEMG
FRNSNNGFSNNGYQNGNSNGGYRSQQNNNGFQNNNYNRDFPKRQEDGNGGSEQPKKFGFF
NPKKDN