Identifiers and Description

Gene Model Identifier

TTHERM_00216040

Standard Name

NHP6B (Non-Histone Protein)

Aliases

PreTt22229 | 18.m00255 | 3701.m00017

Description

high mobility group (HMG) box protein; HMG box family protein. Homologue of budding yeast NHP6B (Nabeel-Shah et al., 2020).

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Domains

  • ( PF00505 ) HMG (high mobility group) box

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_06570.1 8.001227934218267e-54
Description: HMG box family protein (241 aa)
WormBase WBGene00010055 8.001227934218267e-54
Description: status:Confirmed UniProt:G5EE46 protein_id:CAA91337.3
SGD YBR089C 4.0002685161515803e-16
Description: -A NHP6B High-mobility group (HMG) protein that binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; homologous to mammalian HMGB1 and HMGB2
Oxytricha Contig9501.0.g55 0.000000000000008002679274403579
Description: HMG (high mobility group) box
WormBase WBGene00001972 0.000000000040005666873964816
Description: locus:hmg-1.2 High mobility group protein 1.2 status:Confirmed UniProt:Q09390 protein_id:CCD83369.1
DictyBase DDB_G0270260 0.00000005999527666938375
Description: nhp6 on chromosome: 1 position 4527247 to 4527672

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:31932604: Nabeel-Shah S, Ashraf K, Saettone A, Garg J, Derynck J, Lambert JP, Pearlman RE, Fillingham J (2020) Nucleus-specific linker histones Hho1 and Mlh1 form distinct protein interactions during growth, starvation and development in Tetrahymena thermophila. Scientific reports 10(1):168

Sequences 

>TTHERM_00216040(coding)
ATGAGTTCTGAATTTAGCTAATTCTGCTAATAAGTAAGCAGCCAACTTAGTGGTTTGGCT
ACACTTTTCCAAAAGTTTGGCAAGTCTGGAGCTGCTGACGCTAAGCCTGCAGTTTCTAAT
AACAAGTCCACCGATGATAAGAAAAAGAAAAAGAAGGAAAAGAAGGACCCAAACGCCCCC
AAAAAGCCAATGTCTGCCTATCTCATATTCTGCTAAACTAGATAACCAGAAATTAAGGCT
AAAAACCCTGACCTTTCTTTCTCTGAAATTTCTAAGGTTGTAGGTTAAGAATGGAGAGAC
TTGAGTTAAGATAAAAAGCAAGGTTACATAAAAAAAGAAGAGTAACTCAAAAAAGAGTAT
AATTCTAAGCTTGCTGAGTTCAATAAAAAAAATAATGGTTCAACTTAATCATCATCTACT
GCTCCTTCTACTTCATAAAGTGAAGAATAAAAGAAAAGCAAGGCCAAGAAGAAATAAGAA
AAGAAGGCTAAAGAAGCAAAGGCCAAAGCAGCTTCTGCTGTTGTTTAAAAACCAAGTAAA
GCTGATTCTGATGAAAGTGACGATGATTCATCTGAAGAAGTAAAACCAGTAGCTAAAGCC
AAGGTTGCTACCTCTACTACTGAAAGCTCTAAAGCTTCAAAGGATAAGAAGGTAGCCGTA
TCTAAGAAAGCTGAAGAAGAACAAGAAAAGAAATCTTCTAAGAAAGTAGTTGCTAAGCCT
GCTTCTTCTTCCAGTAGTGATGAAAGTGATGATTCTGATGATTCAGAACCTGTTAAAGTT
AAAAAGGTTAAAAATTGA


>TTHERM_00216040(gene)
ATGAGTTCTGAATTTAGCTAATTCTGCTAATAAGTAAGCAGCCAACTTAGTGGTTTGGCT
ACACTTTTCCAAAAGTTTGGCAAGTCTGGAGCTGCTGACGCTAAGCCTGCAGTTTCTAAT
AACAAGTCCACCGATGATAAGAAAAAGAAAAAGAAGGAAAAGAAGGACCCAAACGCCCCC
AAAAAGCCAATGTCTGCCTATCTCATATTCTGCTAAACTAGATAACCAGAAATTAAGGCT
AAAAACCCTGACCTTTCTTTCTCTGAAATTTCTAAGGTTGTAGGTTAAGAATGGAGAGAC
TTGAGTTAAGATAAAAAGCAAGGTTACATAAAAAAAGAAGAGTAACTCAAAAAAGAGTAT
AATTCTAAGCTTGCTGAGTTCAATAAAAAAAATAATGGTTCAACTTAATCATCATCTACT
GCTCCTTCTACTTCATAAAGTGAAGAATAAAAGAAAAGCAAGGCCAAGAAGAAATAAGAA
AAGAAGGCTAAAGAAGCAAAGGCCAAAGCAGCTTCTGCTGTTGTTTAAAAACCAAGTAAA
GCTGATTCTGATGAAAGTGACGATGATTCATCTGAAGAAGTAAAACCAGTAGCTAAAGCC
AAGGTTGCTACCTCTACTACTGAAAGCTCTAAAGCTTCAAAGGATAAGAAGGTAGCCGTA
TCTAAGAAAGCTGAAGAAGAACAAGAAAAGAAATCTTCTAAGAAAGTAGTTGCTAAGCCT
GCTTCTTCTTCCAGTAGTGATGAAAGTGATGATTCTGATGATTCAGAACCTGTTAAAGTT
AAAAAGGTTAAAAATTGA


>TTHERM_00216040(protein)
MSSEFSQFCQQVSSQLSGLATLFQKFGKSGAADAKPAVSNNKSTDDKKKKKKEKKDPNAP
KKPMSAYLIFCQTRQPEIKAKNPDLSFSEISKVVGQEWRDLSQDKKQGYIKKEEQLKKEY
NSKLAEFNKKNNGSTQSSSTAPSTSQSEEQKKSKAKKKQEKKAKEAKAKAASAVVQKPSK
ADSDESDDDSSEEVKPVAKAKVATSTTESSKASKDKKVAVSKKAEEEQEKKSSKKVVAKP
ASSSSSDESDDSDDSEPVKVKKVKN