Identifiers and Description

Gene Model Identifier

TTHERM_00237490

Standard Name

RAD54 (Homolog of budding yeast RAD54)

Aliases

PreTt18793 | 20.m00257 | 3706.m00024

Description

RAD54 SNF2 family amine-terminal protein; SNF2 family N-terminal domain containing protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• ATP binding (IEA) | GO:0005524
• DNA binding (IEA) | GO:0003677
• helicase activity (IEA) | GO:0004386
• nucleic acid binding (IEA) | GO:0003676

Domains

• ( PF00176 ) SNF2 family N-terminal domain
• ( PF00270 ) DEAD/DEAH box helicase
• ( PF00271 ) Helicase conserved C-terminal domain
• ( PF04851 ) type III restriction enzyme, res

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_07944.1	9.997093137033517e-262
	Description: SNF2 family domain-containing protein (1016 aa)
DictyBase	DDB_G0282997	3.0008389609965914e-128
	Description: rad54 on chromosome: 4 position 118731 to 121607
WormBase	WBGene00004298	6.001241942754875e-123
	Description: locus:rad-54 status:Partially_confirmed UniProt:G5EEN6 protein_id:CAA22254.2
SGD	YGL163C	1.999447289884935e-116
	Description: RAD54 DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
Stentor Coeruleus	SteCoe_19439	3.917469664450395e-64
	Description: None
Oxytricha	Contig12570.0.g36	1.9999167998962255e-60
	Description: SNF2 family N-terminal domain

General Information

No.	Gene Name(s)	Paragraph Text
53	RAD54	In yeast, DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00237490(coding)
ATGTTAAAAAAACCATTCAAACCTCCTGGATCTAAAGATGGTTCAGAAAATACAAGCGGT
TTATCAAAACCATTTTAAAAGCCATTGCTGAAATAAACTATTTCTGCTCCTTCTAACTTA
GAGTCAGCAAAAGCTACTAAGAAAGAAGAGTCAGTTGACTCAAAAGAATAGCCTATTAGT
GATTCAGAAAATTTAAAAGAAAACAAAGAAAAAACTACTCCTGTAATTTAAAATAAACCA
TAGGGCTTATTAGGATTGAAGTCAAAGCCATTCAAACCTTTAGTAAGTAAGTTAGAAGTT
AAAAGTAATACTGATACTAAAACTTAAATGAAACCTAGCTCAACTTTTAGCACAAATCCT
ACAGCAAAAAATTAACCACCATAATAAGAAGAAAAAAATAGTCCTGAAGAATTTTATAAA
TGCTTTTGGTCGAAAGACGTTAAGAAAAAACACAAAGTATTAGATGATGGTATTATAGTA
TTTACTTCTAGTAAAGTATAAATATATAACTCAGATGGAGAAAAAATTTACGATAGCTAC
AAATCAAAACTGTATTGTCCTAATCCAGATAATGGAAACTAATACATAGTAGGTTAATAT
TTTGTTGAGCAGGATGATAAAATATCAAAAGATGATTTCTTAAGTGGAAGATGCTTTGTC
AAGGCCAAAATGACTTATGAAAAAGATTAAACAATCGCCAAAAAAAAAATAGCCCCAATG
AAGAAAAATACATAGTCTGAAGGGCCTAAACCCTCAGATATAGTTGTTCCTGAAAACTCG
TATTTGCTCACTGACCCTTCTAATAAATAACTTTTTCCTGTTTACATCGATGTTTACTTG
AATAATAGCATGAGAATTCATCAAAGATTGGGTGTTAAATTTATGTTTGAGTGTATTTCA
GGCCTTAGAGGACCTGATATTGGTGGTTGCATTTTAGCTGATAGTATGGGTCTCGGTAAG
ACACTTCAAACAATAGCATTAATCTGGACTTTGATAAGAAGAAATCCACATTCAGGAACT
TCACCTTTAATTAGAAAAGTTGTAGTAGTAGCACCAGTAAGTCTATTAGGAAGTTGGAAT
AAAGAAGTAAAAAAATGGCTAGGAGATGCACGTTTAATCCCTAAAATAGCTTTAGGCAAA
AGAGAAACAGTAATCAGAATTTGCAAAGAATTCGCAAGTAGCTCAGCTAAAATGCTTCTA
ATTTCTTACGAGTAATTTAGAATGCATGTAGAGACTTTATCTAATGCTTGTGACCTCTTA
ATTTTCGATGAAGGTCACAGACTCAAAAACATGAATATCAAAACATTTAGATCTTTTAAT
TCAATTAAATGCAATAGGCGTATTATACTAACTGGTACACCACTTCAGAACTCTTTAGAT
GAATTCTACTCTTGTGTTAAGTTTGTTAACCCGAATATCTTTGAAAACGAAAAGTAGTTT
AAATTTGTTTTTTCAGATCCTATTTTGGCAGCTTTAAAAAGTGATGCTTCTGCAGATGCT
GTCGAAAAGGCTGCTGTAAGAAGTAAAGAACTCACTCATATAATCAGTAGATTCGTTTTA
AGAAGAAAGGCTGATATTTTGGAAAAATTATTACCTCCTCGTTCTGAATACTTTATCTTT
TTGAAGCTTACACCTTTTTAAAACATGTTATATAAGAAGATGATATAAGCAAGATATAAT
AAAAGCGAACTTGATACTGGTGAAGGTGCTTTTGGCCTTCTGACTATAATGAGAAAGTTA
CTCAATCACCCTTAGCTTATATACACTGATGTAGGCAACCAAACGTCTTAAGAGTTTAAG
CAATATTTCCCTTAAGATTATCAACTTGATGATTGGGAAGCTTCTTTTAAGTTTAAATTT
ATTTCAGATTTACTAGATTAAATGAGATAGATTGAAATAGCCTAAAAATCAACTGAAAGA
ATAATTATCGTATCTTATTGGACTTAAACTCTTGATGTTCTATAAATTATGATCAAATAA
AAAAATTTAAAATTTGTCCGTCTTGATGGTTCAGTGAATGCACAAAAAAGATAAGAATTG
ATTGATAGATTCTAAGACCCCACTAATGACATCAAAGTTTTCTTGCTTTGTGGTAGTGCA
GGTGGTACAGGTTTAAATCTTAGTGCAGCAAACAGAATGGTTTTAATGGAAGCTAACTGG
AATCCTTCAAACGATTTATAGGTTATGGGAAGAATTTGGAGAGATGGATAAACAAAACCA
GTGCATATTTACAGATTAGTTGCTTGTGGCACTATGGAAGAAAAAGTTCTACAGAGATAG
TTCTTGAAAGAAGACTTAAGTTAAAATGTAGTTGATGAAAAAATGATTGTTAAACAATAT
AATAATGATAAACTAAAATAACTTTTTGAATTTAAGGGAGATAATTAATGTACCAGCTTT
AAAGAAGATGAAAATTAATTAAATTAATTAAAAGAGTTTACTCCTGATTATGTTGATACT
ATGGAGAAATATATAACTTTTGTAAAGAGAACAATTAAGGGAGAAAAGAAAGATTAGGAG
TAAGAGAGTGAAAATGTAATTGATAATGCTTTTGATGAAGGAAATATTTTCTTAAAACCA
GAAGCCTAAAATGAAGATGAAGCTGATGGAGAAGATTCATTAGATGATAAAGAAATTAAT
GAAGAAGAGGAAGAAAAAATAAGAGAAGAATTAACTAAAGACATCTCTGAATCCACAGCA
GCAACAGGAGAGCTAAGCAGAATAATAGAGGAAGATGATAAAAATGTTAAAGAGTGTAAT
GAGAGTGATGATGATTTTGCTATATTTAATTATGCTAAAAAAAAGGATTCAGATAATGAA
TAACCCATAAAAGAAATAAAGAATGAAGATCTTATAGATAACTAAATTGCAGCTGAAAAG
GAGGAAGAATCATAAAATAAAGATAATAAAGAAGCAGATATGCAAGTTGAAGAAAAAGCT
GAAGATGAAGATGAAGTTGTTGTAACAAAAGGCAGAAGAGGAAGAAGAAAAGCAACTACA
ACAAGTGATACTAATCCAGCCAAAAATATACTTAAAAAATTAAAAAAATGA

>TTHERM_00237490(gene)
ATGTTAAAAAAACCATTCAAACCTCCTGGATCTAAAGATGGTTCAGAAAATACAAGCGGT
TTATCAAAACCATTTTAAAAGCCATTGCTGAAATAAACTATTTCTGCTCCTTCTAACTTA
GAGTCAGCAAAAGCTACTAAGAAAGAAGAGTCAGTTGACTCAAAAGAATAGCCTATTAGT
GATTCAGAAAATTTAAAAGAAAACAAAGAAAAAACTACTCCTGTAATTTAAAATAAACCA
TAGGGCTTATTAGGATTGAAGTCAAAGCCATTCAAACCTTTAGTAAGTAAGTTAGAAGTT
AAAAGTAATACTGATACTAAAACTTAAATGAAACCTAGCTCAACTTTTAGCACAAATCCT
ACAGCAAAAAATTAACCACCATAATAAGAAGAAAAAAATAGTCCTGAAGAATTTTATAAA
TGCTTTTGGTCGAAAGACGTTAAGAAAAAACACAAAGTATTAGATGATGGTATTATAGTA
TTTACTTCTAGTAAAGTATAAATATATAACTCAGATGGAGAAAAAATTTACGATAGCTAC
AAATCAAAACTGTATTGTCCTAATCCAGATAATGGAAACTAATACATAGTAGGTTAATAT
TTTGGTAAGCAGAAAGTAATTTAAAGTGATGATTTCAATTGATTTTTTTAATAAAATTTA
GTTGAGCAGGATGATAAAATATCAAAAGATGATTTCTTAAGTGGAAGATGCTTTGTCAAG
GCCAAAATGACTTATGAAAAAGATTAAACAATGTAATTTAGTTTATTTTTAGCTACTCTT
TTGATAAAGATTTCTTACTAAAACTAAAATTTAACTCTTTTTTGTCTAAAATACATTAAA
AGCGCCAAAAAAAAAATAGCCCCAATGAAGAAAAATACATAGTCTGAAGGGCCTAAACCC
TCAGATATAGTTGTTCCTGAAAACTCGTATTTGCTCACTGACCCTTCTAATAAATAACTT
TTTCCTGTTTACATCGATGTTTACTTGAATAATAGCATGAGAATTCATCAAAGATTGGGT
GTTAAATTTATGTTTGAGTGTATTTCAGGCCTTAGAGGACCTGATATTGGTGGTTGCATT
TTAGCTGTAAATTATTAAAATATTATTCAAATAACTAATTAATTGATTTTATAATCAATT
TTAGGATAGTATGGGTCTCGGTAAGACACTTCAAACAATAGCATTAATCTGGACTTTGAT
AAGAAGAAGTAATGCTAAAAATTTATTTTAGGTTATAAATAGTTTATAAAAAAATAATTA
ATTAATTAATAGATCCACATTCAGGAACTTCACCTTTAATTAGAAAAGTTGTAGTAGTAG
CACCAGTAAGTCTATTAGGAAGTTGGAATAAAGAAGTAAAAAAATGGCTAGGAGATGCAC
GTTTAATCCCTAAAATAGCTTTAGGCAAAAGAGAAACAGTATAAAATATATTTAATTTAA
CAAAATTTGATTAAATTAAACTGCTAAATTTAATAAATATTAGGTAATCAGAATTTGCAA
AGAATTCGCAAGTAGCTCAGCTAAAATGCTTCTAATTTCTTACGAGTAATTTAGAATGCA
TGTAGAGACTTTATCTAATGCTTGTGACCTCTTAATTTTCGATGAAGGTCACAGACTCAA
AAACATGAATATCAAAACATTTAGATCTTTTAATTCAATTAAATGCAATAGGCGTATTAT
ACTAACTGGTACACCACTTCAGAACTCTTTAGATGAATTCTACTCTTGTGTTAAGTATAA
ATTATAATATCTTTTTATTATGAACTTAATTTTTTCTAATTAAAGGTTTGTTAACCCGAA
TATCTTTGAAAACGAAAAGTAGTTTAAATTTGTTTTTTCAGATCCTATTTTGGCAGCTTT
AAAAAGTGATGCTTCTGCAGATGCTGTCGAAAAGGCTGCTGTAAGAAGTAAAGAACTCAC
TCATATAATCAGTAGATTCGTTTTAAGAAGAAAGGCTGATATTTTGGAAAAATTATTACC
TCCTCGTTCTGAATACTTTATCTTTTTGAAGCTTACACCTTTTTAAAACATGTTATATAA
GAAGATGATATAAGCAAGATATAATAAAAGCGAACTTGATACTGGTGAAGGTGCTTTTGG
CCTTCTGACTATAATGAGAAAGTTACTCAATCACCCTTAGCTTATATACACTGATGTAGG
CAACGTAAATAAAATAATTATTTTTATATTTGATTAAATTAATAATCTATAATAAAAATA
GCAAACGTCTTAAGAGTTTAAGCAATATTTCCCTTAAGATTATCAACTTGATGATTGGGA
AGCTTCTTTTAAGTTTAAATTTATTTCAGATTTACTAGATTAAATGAGATAGATTGAAAT
AGCCTAAAAATCAACTGAAAGAATAATTATCGTATCTTATTGGACTTAAACTCTTGATGT
TCTATAAATTATGATCAAATAAAAAAATTTAAAATTTGTCCGTCTTGATGGTTCAGTGAA
TGCACAAAAAAGATAAGAATTGATTGATAGGTTAGAAATTTTTTTTGATTTTTCCAATAA
ATAGAAATATTTTCAACAAAAAGATTCTAAGACCCCACTAATGACATCAAAGTTTTCTTG
CTTTGTGGTAGTGCAGGTGGTACAGGTTTAAATCTTAGTGCAGCAAACAGAATGGTTTTA
ATGGAAGCTAACTGGAATCCTTCAAACGATTTATAGGTAATTAATCTTCATTAATTTTAG
AAAAATAAATTTTGGTTTAGTATCAAATTTTCACAGTTTGTATTGAAAAATGTTGTAATA
TTAATGCTTTTTTAATTTAAATTTCCTTTTTTAAATAATTTTTAAATATATTTAATTATC
TTTGGGTGATTTTTATAGATCATTATTGAATTTAATAGAATTATTAATTATATCAAATTT
TATCAATTAAGGTTATGGGAAGAATTTGGAGAGATGGATAAACAAAACCAGTGCATATTT
ACAGATTAGTTGCTTGTGGCACTATGGAAGAAAAAGTTCTACAGAGATAGTTCTTGAAAG
AAGACTTAAGTTAAAATGTAGTTGATGAAAAAATGATTGTTAAACAATATAATAATGATA
AACTAAAATAACTTTTTGAATTTAAGGGAGATAATTAATGTACCAGCTTTAAAGAAGATG
AAAATTAATTAAATTAATTAAAAGAGTTTACTCCTGATTATGTTGATACTATGGAGAAAT
ATATAACTTTTGTAAAGAGAACAATTAAGGGAGAAAAGAAAGATTAGGAGTAAGAGAGTG
AAAATGTAATTGATAATGCTTTTGATGAAGGAAATATTTTCTTAAAACCAGAAGCCTAAA
ATGAAGATGAAGCTGATGGAGAAGATTCATTAGATGATAAAGAAATTAATGAAGAAGAGG
AAGAAAAAATAAGAGAAGAATTAACTAAAGACATCTCTGAATCCACAGCAGCAACAGGAG
AGCTAAGCAGAATAATAGAGGAAGATGATAAAAATGTTAAAGAGTGTAATGAGAGTGATG
ATGATTTTGCTATATTTAATTATGCTAAAAAAAAGGATTCAGATAATGAATAACCCATAA
AAGAAATAAAGAATGAAGATCTTATAGATAACTAAATTGCAGCTGAAAAGGAGGAAGAAT
CATAAAATAAAGATAATAAAGAAGCAGATATGCAAGTTGAAGAAAAAGCTGAAGATGAAG
ATGAAGTTGTTGTAACAAAAGGCAGAAGAGGAAGAAGAAAAGCAACTACAACAAGTGATA
CTAATCCAGCCAAAAATATACTTAAAAAATTAAAAAAATGA

>TTHERM_00237490(protein)
MLKKPFKPPGSKDGSENTSGLSKPFQKPLLKQTISAPSNLESAKATKKEESVDSKEQPIS
DSENLKENKEKTTPVIQNKPQGLLGLKSKPFKPLVSKLEVKSNTDTKTQMKPSSTFSTNP
TAKNQPPQQEEKNSPEEFYKCFWSKDVKKKHKVLDDGIIVFTSSKVQIYNSDGEKIYDSY
KSKLYCPNPDNGNQYIVGQYFVEQDDKISKDDFLSGRCFVKAKMTYEKDQTIAKKKIAPM
KKNTQSEGPKPSDIVVPENSYLLTDPSNKQLFPVYIDVYLNNSMRIHQRLGVKFMFECIS
GLRGPDIGGCILADSMGLGKTLQTIALIWTLIRRNPHSGTSPLIRKVVVVAPVSLLGSWN
KEVKKWLGDARLIPKIALGKRETVIRICKEFASSSAKMLLISYEQFRMHVETLSNACDLL
IFDEGHRLKNMNIKTFRSFNSIKCNRRIILTGTPLQNSLDEFYSCVKFVNPNIFENEKQF
KFVFSDPILAALKSDASADAVEKAAVRSKELTHIISRFVLRRKADILEKLLPPRSEYFIF
LKLTPFQNMLYKKMIQARYNKSELDTGEGAFGLLTIMRKLLNHPQLIYTDVGNQTSQEFK
QYFPQDYQLDDWEASFKFKFISDLLDQMRQIEIAQKSTERIIIVSYWTQTLDVLQIMIKQ
KNLKFVRLDGSVNAQKRQELIDRFQDPTNDIKVFLLCGSAGGTGLNLSAANRMVLMEANW
NPSNDLQVMGRIWRDGQTKPVHIYRLVACGTMEEKVLQRQFLKEDLSQNVVDEKMIVKQY
NNDKLKQLFEFKGDNQCTSFKEDENQLNQLKEFTPDYVDTMEKYITFVKRTIKGEKKDQE
QESENVIDNAFDEGNIFLKPEAQNEDEADGEDSLDDKEINEEEEEKIREELTKDISESTA
ATGELSRIIEEDDKNVKECNESDDDFAIFNYAKKKDSDNEQPIKEIKNEDLIDNQIAAEK
EEESQNKDNKEADMQVEEKAEDEDEVVVTKGRRGRRKATTTSDTNPAKNILKKLKK