Identifiers and Description

Gene Model Identifier

TTHERM_00268040

Standard Name

NUP185

Aliases

PreTt09839 | 24.m00270 | 3690.m00084

Description

hypothetical protein; Viral A-type inclusion protein repeat containing protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Biological Process

Domains

  • ( PF00038 ) Intermediate filament protein
  • ( PF00435 ) Spectrin repeat
  • ( PF00904 ) Involucrin repeat
  • ( PF01576 ) Myosin tail
  • ( PF01920 ) Prefoldin subunit
  • ( PF02370 ) M protein repeat
  • ( PF02524 ) KID repeat
  • ( PF04508 ) Viral A-type inclusion protein repeat
  • ( PF04702 ) Vicilin N terminal region
  • ( PF05465 ) Halobacterial gas vesicle protein C (GVPC) repeat
  • ( PF06160 ) Septation ring formation regulator, EzrA
  • ( PF06401 ) Alpha-2-macroglobulin RAP, C-terminal domain
  • ( PF06696 ) Streptococcal surface antigen repeat
  • ( PF06810 ) Phage minor structural protein GP20
  • ( PF07197 ) Protein of unknown function (DUF1409)
  • ( PF07200 ) Modifier of rudimentary (Mod(r)) protein
  • ( PF07334 ) Interferon-induced 35 kDa protein (IFP 35) N-terminus
  • ( PF07926 ) TPR/MLP1/MLP2-like protein
  • ( PF08614 ) Autophagy protein 16 (ATG16)
  • ( PF08647 ) BRE1 E3 ubiquitin ligase
  • ( PF08946 ) Osmosensory transporter coiled coil
  • ( TIGR00293 ) prefoldin, alpha subunit
  • ( TIGR01280 ) exodeoxyribonuclease VII, small subunit
  • ( TIGR02169 ) chromosome segregation protein SMC
  • ( TIGR02338 ) prefoldin, beta subunit
  • ( TIGR03398 ) phospholipase C accessory protein PlcR

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
WormBase WBGene00022500 0.000000100009565553302
Description: locus:lfi-1 status:Partially_confirmed UniProt:H2L0I3 protein_id:CCD73131.1
Tetrahymena borealis EI9_03526.1 0.00000030014504373857585
Description: hypothetical protein (1656 aa)
Oxytricha Contig11784.0.g11 0.0000004998288985444982
Description: Reovirus sigma C capsid protein
SGD YDR356W 0.000005000363240844623
Description: SPC110 Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nuclear microtubules to SPB; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner
DictyBase DDB_G0290503 0.0002999184360822198
Description: DDB_G0290503 on chromosome: 5 position 4159418 to 4164037

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:28386019: Iwamoto M, Osakada H, Mori C, Fukuda Y, Nagao K, Obuse C, Hiraoka Y, Haraguchi T (2017) Compositionally distinct nuclear pore complexes of functionally distinct dimorphic nuclei in the ciliate Tetrahymena. Journal of cell science 130(10):1822-1834

Sequences 

>TTHERM_00268040(coding)
ATGGATAGCAATTAAGCCGCAGACCAAGAAAAATAAGTTGAAGCATAGAATGAAGAATAA
AAATAAGAATAAGAAAACAATGAATAAAAGGAAAATGAATCTGAATAAGCTTAAACAGAT
CCATAAATCAGCTCAGGAAGTAATTAAAAATTTGATATTGAAATCACAGATGAAGACAAT
GACCCAGAGATTGAAAACAATCAAACTATAGAATAGATGAAATTTAAAGCTTATGACCTA
AAAGCTGAATGTAGGAAATTTAGCAGAAGAACTTAAAGTTAAATTCGCAAATTTGGAAAC
GGATTATGA


>TTHERM_00268040(gene)
ATGGATAGCAATTAAGCCGCAGACCAAGAAAAATAAGTTGAAGCATAGAATGAAGAATAA
AAATAAGAATAAGAAAACAGTAAATTTTTTTTTTTCAAATTCAATTTATAATTGTTAATG
TTTTTAAAAAGCCATTAATATATAATTATCTTAAAAATATTTCTAAATATTTTTTGAATC
CGGCTTCTATTTTTATTGAAACTTATGAACCAAATTAATATTCTGCTTACAATTGAAAAA
AACGAAATAAAGATTTTAGTTTAAAATAAATATTTTATTCAAGTAATAATTTTATTATTT
TATAATTAAGATGAATAAAAGGAAAATGAATCTGAATAAGCTTAAACAGATCCATAAATC
AGCTCAGGAAGTAATTAAAAATTTGATATTGAAATCACAGATGAAGACAATGACCCAGAG
ATTGAAAACAATCAAACTATAGGTAAAATTATTTTAAAAGTATACATAGTATATTAATAT
TGTTATTTTTATTTAAATTTAGAATAGATGAAATTTAAAGCTTATGACCTAAAAGCTGAA
TGTAAATATTGACTTTTAGCTTTTATATATAAACATTTTTTAGTAAAAAAGGTAGGAAAT
TTAGCAGAAGAACTTAAAGTTAAATTCGCAAATTTGGAAACGGATTATGATTAATGTAAA
GATGAAAAAGAAGAATTAGAAAAAAAGTATAAATAAAGTATTGAAAAGTATGGTGAAATG
ATGAAAAATTATGAACATTAGATTATTAGCTTAGAAAACGAAAATAATATAAGAATTCAA
TAATTATAGCAGTAAATAGATGAATTAAAAAAATAGAATGAAGAAAAAGAATAGAGCTAC
TTAAATATGCAATAACAGATAAAATAAGATAAGTAAAGCTTTGATGACATATAAAACAAA
TATGAAGAAATTAATAAACATAATTAAGAATAATTCAAATAAAATAGTGACCAATGGGTA
AAACTAGTCAATCTAACTGAAGAAGTTATTTTCAATTTTTACAATTCTAATTTCTTTACT
GAAAATAAAGACGACATATCAAGTTAAACTCATATAATATTGTAGCATCAATAAACTTTC
CAACAATTAATTGAAAAATATGTGACCTTCTTAGCTGAATAAAAAGAAAAAAATGAAGCT
ATTTCAGATGAAGCTTTTAACAAAATAAAATCTGAAAACGGAAATGGTGTCTAAAAGACT
AACCAAAGAGTATAAGATTTATAACAAAAGTTCGAAGCGTACTAGCAATAATTCAATAAA
TTAAATTCAGAATCATAGGAAAATGAAACTAAACTCCAAGAAACAAAAAAGCAATTAGAA
GATTTGTAAAATGAATTGGGAAACAAAAATAATTAAATATAAGAATTAAATGAATAGCAT
TAAAAATCTTAAACAGAAATCTAAAAATTGAATGAACAAATAACTTCAAATCAATAAAGA
ATAGAAGAGCTTTAGAAAAACGAAAATATCTTAGTTGAGAAAGATAAAAATATAAATGAG
ATCAAAGAATAATTATCAGCTTTAAATCAGCAAATTGAAGGATTCAAGGATATTTAAAAT
AAGTTGGATACTAAAACTGAAGAATTTGAAAAGCTTGAGAAAGATTTTAATTAATAAAAA
AGTGAATTAGAAGAAAAAATAAAATCAAAAGATGAAGAAATAGAGAATCTCAGCAAAAAA
ATTCAAGATATAGTAGAATAATAACAAGAAAAACAAAAATAATTAGATGATTTGAATTCT
AATTTATAAAATTCTAATAAAGAAAATGAATAACTGAAATAAGAAATTAATGATTTTAAA
AATAAAATTAACAATAGTAACTAGGATTAAGAGTAATAATCAAACTAATTAAAAGCAGAA
TTAAAACAAACTTAAGAATAGCTAAATGATTCTTAATAAAAATTTGAATAAGCAGATAAA
GAATTAAAAGATCTCAAATAGCAAATTGAAGATGAAAAAGTTAAATTGAATGATAAGAGT
TAGGAATCAGAGAACTTGAAAGACTAACTCAAATCAGCAAATGAAAAACTAAATGAATCT
CAATAAAAGTTAGAGCAAATTTAAAAAAATTTTGATGATTTGAAGCAAAATAACGATTTA
CAGAAGATAGTTGATGAAAAACAATAAAAATGTGAAGAATTAGAAAGAGAATTGAAAGAG
TTAAAAACTTAACAAGAATAAGTTACAGCTTAAGTCCAATAATTAAATGTAGAGAAAGAA
GAAATTTAAACTAAATTTAACTAGGTCGAACAGGAAAAAGAATAACTTAAAAAGTAAGAG
CAAGAAAAAATTGACTTATTAAGTTAGGCTAAATAAGAAAAAGAAAATAATGAACAAGAA
ATCAATAATTTAAAGTAGACTATTGCAAATTTAGAAAAAGAAAGAACAGATATTTAAATA
CAATCTTAAGAAAAAGATAAATAATTGGATGACGCTAAACATACCTTAGAAAATTTAAAC
AAAGAAATCGAACAATTAAAGAATTAAAATTAGGCAATAGGTGATGTTAATGAGAAAAAT
AAGTAATTAGAAAGCGAAATCACCTAAATTAAAAGCGAAATTGAATAAAAAAATACTGAA
ATTTAAAGTTTAAATAGTAAAAATGAAACTGAGATATCAGAAAAAAAATAATAACTTGAA
GATCATACTAAATAAGTGAATTAGTTAAATGAATAAATTCATCAATTGAGCACTGAGAAT
GAAAACCTTAAAAACGAAATTCAAACTAACTAAAATATATCTTAAACTAAATTAACAGAT
TTAAATTCTGAAATTGAAGGCTTTTAAAAAGAAATAGAAGAGACAAAACTATAGCTAGAT
GATAAAAATACATAGTTAAAAGGTTTACAGGTAAAGCTAGAAGCACTTGAAAAGCAACTT
TTAGAAAAAAATGAAGAAATACAAAAAGTAAATTAATAATTAAAAGAAAGTGAATAAAAG
CACGAAGCCATCTAAAAATAGAATGAAGAATTGTAAAATTCTTTGAAAACACTAGAGGAA
AAAGATTATAATTAGATTCAAAACGATCTAAATTAGTAAGTTTCAGATTTAAAATAAAAA
GAGTAGGATTTAAATAAATAATTAGATTAAAAGTTGCAAGAAATCAATTAGATTAAATAA
TAATTATCAAATGAAACATCAGATTTCATGAAAAAGAATGTATAACTTTAATAGACAATT
TAGTAGCTAAATCAAACAATTTCATAATATCAAGAACAAATAGAGAGAATAAAAACCGAT
TTATATTAAAGCTAATAAGAAAAAAGCTAACTTTAAAGTAAATTAAATGAGGCAAACAGA
GAAATTTAAAATAAAGAAGATGATTTAAATAAAAAAGTAGAAATAATAGCTGAGCTTGAA
CAAAATAACAAAGATTTAAAAATAAATCTTCACAACTATGAAGTAAAGAGTTATGATTTA
GATAAAGAGAGATTTGATGTGTTAGAAATATAGATATAACATAATAAAGAATAGTAAGTT
TAGTATAAACAAGCAGAAGAAAAAATTTAAAAACTAGAAGAAGAAATAAAAAAGTTACTT
GCTGACAAAACAGATTCATTGGAAAAACTCTAGAAGGAAATTAAAACTGAATAAGTGATT
GGAGAAGAGATGTCTAAGAAATTCAGATCAAATTTAGCAGAGTTATAAATCAATAACGAA
TAAAATAGCTTGGAAAATTCTCAAAAAACTATAAATCAATTAGCAGAAGTAGTATTGAGA
AAAGTAAAAGACTGTTTCTATTCCAGCACTAAAATTGTTTAAATTTCTCGTCTCTTTTAT
GATGGATCTGATGGACGTAATGCTTCACAAGATAATGCCCTTTCTTTAATCCAAGAACTT
AATGAAGCCTAACACGCATCTATCACAATTCACAAGCTTTTAGGTTTCGAGTATAAGAAA
TTCAAGAATATTTTACCAATTTAATATTTAAGAAACGACTTTAAGGTTATAAATCAAACA
GAAAATACAACTTAGCCACTTTACGTTAATGAAAATGATCAAGTTGCTTAATATGCAATA
GTAAATTATGAAATCTAAAATAACAAATTTTATGTTGGATTGATTTAATTTGATGTTGTT
AGCACTTACTTTAGAGTTGGTTTTGTCCCTGTTAATCCTTAAACCAAATAAGAGTAGTGG
GGTGAAGCTATTTATGCTAACTTCTGTCTAAATCATGAAGCTGCTAACTCAAAAAATTAT
AGAAATCTTGTGAGAATCAATCATTTCAATCCTATCTTTAGCATTAAAAAGGGCTATATC
TATATTCGTTTTAATATCTAGAAGAACATTTTCTAATTCTGTGACACAAATTATCAATTG
AGCGAATTATCCAAATGCTAATTTAAAAGTGATTTACATTACAAACTCTTCATCGGCATG
AAAGAAACTAAGGGACATTTCTAAATAGTTGATTTGAAGGAATAAAGTAGAGATGAAGAT
ATTAATATTATGACTCAAATATTCTCTAATGAACAGCCATAATTCGAAGATTTGATTAGA
CTTTTTATTTGA


>TTHERM_00268040(protein)
MDSNQAADQEKQVEAQNEEQKQEQENNEQKENESEQAQTDPQISSGSNQKFDIEITDEDN
DPEIENNQTIEQMKFKAYDLKAECRKFSRRTQSQIRKFGNGL