Identifiers and Description

Gene Model Identifier

TTHERM_00279670

Standard Name

RPT1 (26S proteasome regulatory subunit T1)

Aliases

PreTt04810 | 25.m00274 | 3694.m00059

Description

RPT1 26S proteasome regulatory subunit

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Domains

  • ( PF00004 ) ATPase family associated with various cellular activities (AAA)
  • ( PF00158 ) Sigma-54 interaction domain
  • ( PF07724 ) AAA domain (Cdc48 subfamily)
  • ( PF07726 ) ATPase family associated with various cellular activities (AAA)
  • ( PF07728 ) AAA domain (dynein-related subfamily)
  • ( TIGR00382 ) ATP-dependent Clp protease, ATP-binding subunit
  • ( TIGR01241 ) ATP-dependent metallopeptidase HflB
  • ( TIGR01242 ) 26S proteasome subunit P45 family
  • ( TIGR02237 ) DNA repair and recombination protein
  • ( TIGR02880 ) CbbX protein
  • ( TIGR02881 ) stage V sporulation protein K
  • ( TIGR02928 ) orc1/cdc6 family replication initiation protein

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Stentor Coeruleus SteCoe_31456 0
Description: None
WormBase WBGene00004501 9.997093137033517e-262
Description: locus:rpt-1 26S protease regulatory subunit 7 status:Confirmed UniProt:Q18787 protein_id:CAB01414.1
Tetrahymena borealis EI9_08919.1 9.997093137033517e-262
Description: 26S proteasome subunit P45 family protein (432 aa)
DictyBase DDB_G0276917 9.997093137033517e-262
Description: psmC2 on chromosome: 2 position 7234040 to 7235588
Oxytricha Contig11163.0.g1 9.997093137033517e-262
Description: ATPase family associated with various cellular activities (AAA)
SGD YKL145W 9.997093137033517e-262
Description: RPT1 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance
WormBase WBGene00003077 9.997093137033517e-262
Description: locus:lsm-3 status:Confirmed UniProt:Q9U1W8 protein_id:CAB60606.2

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences 

>TTHERM_00279670(coding)
ATGGCTCCTAGCGCAAACGACAAAGATAATTAACAAGGTGAAGAAAAAAAGCACATCCCT
TTGGATGAAGGTGATATTTCTTTATTGAAAGTTTATGGCATGGGTCCATATGCAGAATCC
ATTAAATCAACTGAAGAAGAAAATAAGAATTTAGTAGTAAAAATTAACAAACTATGCGGT
ATAAAAGAGAGTGATACAGGTCTTTCTTTACCTTCTTAATGGGATTTGAAGGGTGATGAA
ATTAGATTGTCTTAATAACATTCTTTACAAGTCGCTCGTTGCAATAAAATCATTCCTGGT
GACTAACCCACTGAAAATAAATACATGATTAGCATCAAGCAAATGGCCAAATTCGTTGTA
GGTTTAGGTGATAAGCTAGCTCCTACCGATATTGATGAAGGTATGAGAGTTGGTGTTGAG
AAATAAAAATATTCTATTCAACTTCCTCTTCCTCCTAAAATTGATCCTTCAGTCACCATG
ATGACTGTAGAAGAAAAACCTGATGTTACTTATTCAGATATTGGTGGTGCTAATGAATAA
TTAGATCGTCTTAAGGAAGTTGTAGAAATGCCTTTACTCTAGCCTGAAAAGTTTATTGAA
TTGGGTATTGATCCTCCTAAAGGTGTTTTACTCTATGGTCCTCCTGGTACTGGTAAAACC
TTAACTGCAAGAGCCGTTGCCAACAGAACAGATGCCTGCTTCATCCGTGTCATCGGTTCA
GAACTTGTTTAAAGATATGTTGGTGAAGGTGCAAGAATGGTTAGAGAAATCTTCTAGTTA
GCAAGAACCAAGAAAGCTTGTATCATTTTCTTCGATGAAATCGATGCTATTGGTGGTGCT
AGACATGATGACGGTGCTGGTAGTGATAATGAAGTCTAACGTACTATGCTTGAAATCGTA
AATTAATTGGATGGCTTTGAAAGCAGAGGTAACATTAAAGTTTTGATGGCTACAAATAGA
CCTGATACTTTAGATCCCGCTTTGTTAAGACCTGGTAGATTAGATAGAAAGGTTGAATTC
GGTCTTCCAGACTTAGAAGGCAGAACTCACATTTTTAAAATTCATGCCAGACACATGAGT
ATGGAAAAAAATATTCGTTATGAATTATTAGCAAGATTATGCCCTAACACCACTGGTGCT
GATCTTAGATCTGTCTGCACTGAAGCTGGTATGTTCGCCATTAGAGCAAGAAGAAAAGCC
ATCTCTGAAAAGGACCTTCTAGAAGCTATTGAAAAGGTTATAAAAGGATATTCTAAATTC
TCTGCAACTGGCAAATATTTAGTTTATAATTGA


>TTHERM_00279670(gene)
ATGGCTCCTAGCGCAAACGACAAAGATAATTAACAAGGTGAAGAAAAAAAGCACATCCCT
TTGGATGAAGGTGATATTTCTTTATTGAAAGTTTATGGCATGGGTCCATATGCAGAATCC
ATTAAATCAACTGAAGAAGAAAATAAGAATTTAGTAGTAAAAATTAACAAACTATGCGGT
ATAAAAGAGAGTGATACAGGTCTTTCTTTACCTTCTTAATGGGATTTGAAGGGTGATGAA
ATTAGATTGTCTTAATAACATTCTTTACAAGTCGCTCGTTGCAATAAAATCATTCCTGGT
GACTAACCCACTGAAAATAAATACATGATTAGCATCAAGCAAATGGCCAAATTCGTTGTA
GGTTTAGGTGATAAGCTAGCTCCTACCGATATTGATGAAGGTATGAGAGTTGGTGTTGAG
AAATAAAAATATTCTATTCAACTTCCTCTTCCTCCTAAAATTGATCCTTCAGTCACCATG
ATGACTGTAGAAGAAAAACCTGATGTTACTTATTCAGATATTGGTGGTGCTAATGAATAA
TTAGATCGTCTTAAGGTAATTAATTCATTTTAAAAAATAATATAAATCAAAGGAGATGCA
TGCATAAATTTGATATTTCAAAGCAGTAACGAAGTTAGAATGAATAGCGGTATTTTCCTA
TCTAAAATAATAAAGAAATTAAGAAAAAGCATAATCATTTCAGAAAAATATGCATTTATT
TTGAAGATTTTAATAAAAACACTTAGTTTAAATATTTAAACTAAAAAATATGGTTTTTGC
TTTGAAGCATTTATTTATTAACAATAAATAAAAAAGCAAATTAAAATAAGATTTTTATTT
ATTGCATTTTTTATTAATTGAATTGATATTTAACCAATTTATTCCCTTGAATAATAAATA
GGAAGTTGTAGAAATGCCTTTACTCTAGCCTGAAAAGTTTATTGAATTGGGTATTGATCC
TCCTAAAGGTGTTTTACTCTATGGTCCTCCTGGTACTGGTAAAACCTTAACTGCAAGAGC
CGTTGCCAACAGAACAGATGCCTGCTTCATCCGTGTCATCGGTTCAGAACTTGTTTAAAG
ATATGTTGGTGAAGGTGCAAGAATGGTTAGAGAAATCTTCTAGTTAGCAAGAACCAAGAA
AGCTTGTATCATTTTCTTCGATGAAATCGATGCTATGTAATTAAATTAAATATAAACACT
TTCTAAGCATTCAAGCCAAATTTTCAAAATTTATAAATAAACTTTTGATTAACTCATTAT
AATATTTTTTTAAATAATTAATTAATTAATTAATTTAGTGGTGGTGCTAGACATGATGAC
GGTGCTGGTAGTGATAATGAAGTCTAACGTACTATGCTTGAAATCGTAAATTAATTGGAT
GGCTTTGAAAGCAGAGGTAACATTAAAGTTTTGATGGCTACAAATAGACCTGATACTTTA
GATCCCGCTTTGTTAAGACCTGGTAGATTAGATAGAAAGGTTGAATTCGGTCTTCCAGAC
TTAGAAGGCAGAACTCACATTTTTAAAATTCATGCCAGACACATGAGTATGGAAAAAAAT
ATTCGTTATGAATTATTAGCAAGATTATGCCCTAACACCACTGGTGCTGATCTTAGATCT
GTCTGCACTGAAGCTGGTATGTTCGCCATTAGAGCAAGAAGAAAAGCCATCTCTGAAAAG
GACCTTCTAGAAGCTATTGAAAAGGTTATAAAAGGATATTCTAAATTCTCTGCAACTGGC
AAATATTTAGTTTATAATTGA


>TTHERM_00279670(protein)
MAPSANDKDNQQGEEKKHIPLDEGDISLLKVYGMGPYAESIKSTEEENKNLVVKINKLCG
IKESDTGLSLPSQWDLKGDEIRLSQQHSLQVARCNKIIPGDQPTENKYMISIKQMAKFVV
GLGDKLAPTDIDEGMRVGVEKQKYSIQLPLPPKIDPSVTMMTVEEKPDVTYSDIGGANEQ
LDRLKEVVEMPLLQPEKFIELGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFIRVIGS
ELVQRYVGEGARMVREIFQLARTKKACIIFFDEIDAIGGARHDDGAGSDNEVQRTMLEIV
NQLDGFESRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTHIFKIHARHMS
MEKNIRYELLARLCPNTTGADLRSVCTEAGMFAIRARRKAISEKDLLEAIEKVIKGYSKF
SATGKYLVYN