Identifiers and Description

Gene Model Identifier

TTHERM_00283900

Standard Name

RNH13 (RNase H1.3)

Aliases

PreTt04929 | 25.m00393 | 3694.m00176

Description

RNH13 RNase H family protein; RNase H family protein; localizes to micronucleus during conjugation

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Biological Process

• protein phosphorylation (IEA) | GO:0006468
• suture of dorsal opening (IEA) | GO:0007396

Domains

• ( PF00075 ) ribonuclease HI

Gene Expression Profile

Tetrahymena Stock Center

• ( SD02710 ) Macronucleus: RNH1.3 with HA tag
• ( SD02711 ) Macronucleus: RNH1.3 with HA tag
• ( SD02712 ) Macronucleus: Neo3 knockout of RNH1.3
• ( SD02713 ) Macronucleus: Neo3 knockout of RNH1.3
• ( SD02714 ) Macronucleus: Neo3 knockout of RNH1.3
• ( SD02715 ) Macronucleus: Neo3 knockout of RNH1.3

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_09026.1	9.997093137033517e-262
	Description: hypothetical protein (695 aa)

General Information

No.	Gene Name(s)	Paragraph Text
117	RNH13	HA-tagged RNase H1.3 localizes to early meiotic micronuclei. RNH13 gene knockout causes aberrant numbers of nuclei in exconjugants.

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00283900(coding)
ATGTGCTATAAGTGCCTTCCTGATCATAGTCTCCATTCTGAATAGATTGTTTAGCTTGAT
AACTTAAGTGATAAAAAAAACTTGGATTGCCAAGAGAATATCAATAGCTCTATAGACAGC
AACAAAAATAATAAGCAGGGAGTCAGTCCACTTAAGGTAAATAGCGAATTCAATGGATCT
CCTTTTATGTTAAATAATCTAGCTAACTTAAAAATAAACTCCAGCTCATAGGAGCCTTCA
GATTAAAACGTAAAAAGAAGTAGTGTTAAAAATAGTTTTAGCAAAGTAAAAGAATTCAAT
TCAACATCTAACATAGAAGAAGAAATACTTGACTAGGGTCAAATCAAGCAAAAAAAGAAA
AAATCTAGCATTTCTCTTGATAAGCCAGAAAAATAAATACAACTTAACAATAATACACAA
AGTAGAAAATAAGAATTTAGAGATGTGTTTGTAATTAAAGAAGAAAATATGGATGATGAT
TATACAAACTGTAAAATTGAGAATGGTGGTAATTCTCATTTGAAAAACACTAATGCTTTA
CCTCAAAATGGAAAGAAATATTCTAAAGAGTCTGCTCAAACTAAAGTTTTTGGGACAGAT
ATGTTGTCACAAATTTCCAGACAAAAAGGTAGTAGTTCCTAAAAAAACATAAATCAGTTA
CTAAGTTAAGCTTCCACAGTATCTCCAAGCATCTAACCTGTTGAGAAGAGTATGATGGAT
GTGATTTCTAATACAACTAATTATTATCCATAATATCCCTTCTATCCTCCTCATAATCCT
TATGAAAATCCTTTCTAATTTAGCACTAATTTTAATCCAGGCCACTAAATGACTTATCCT
CATCCACATCCTTAAGGGTACCCACCAAATTAGGTAAATGCGCCTTTTTCTCACCTCTAT
AACCAGTAACATAATTTTAACAATATGCCTCCTTACTATCCTCCTACTCGTTCTTCTTAT
ATGCCAAGCTTTAACCATAATTATTAGTAGAACCACATGCTTTAAGAGTAAGAAACTAAA
GAATAATATCATACTATATCTGATTCCAGTTCTAGTGATAAATATTTTTCAAAAAAAGAT
AAATTAAGTAATGAAAGAAGTCTCTAAAGAAATTAAATGAAAAATGACAAAATAGATTTT
GTTTCATCTGATGAATCTTTGCAATAATAAGAATAGACAGCTACAGACTTTTTTTAAAAT
GGAGCTCTCTCTGAGTTGATTAAGCAAAACGAAAACATTCAAAAGATATGTGTTTATCTT
AGAACTTTAAATGACATTAAAATGTCAGTATGCACTAAAATTGAGGCCATGAAGAATAAA
TTCCTACAACAAATATAAATGAAAGAATAAGATTTCAGTTATGCATTTTTGGCAAATACT
TTCAACCAAAATAATAACTAAGTAGAAGAAAACTTAAAGAGCTACTTTGCAAAAATACAG
CAACTAAATTCCTTTTTTGAAAAGAATTAACTAAGCTACAACCCTTAAGCTGCTAGCAAA
TAGAAACTAAGCTAGATTGAATAAGAACTTGATAGAATGCTTTTTTTTACTATTGAGAAA
ATAGATTAGGAAACTTTAAATTAAACTAAACTAATCAAGTAAGAACATATTGACCCTTTC
AAAGATAATTCAGAGTATGAAGAATTAACATAATTTTATCAAAACTAACCTGCTAATATT
GATGCAATCAAAGACAAAATAAACTTTTATTCTTAGTGTTAGCTCGAATTTGATGGAACA
TCAAAAGGAAACCCTGGAAGATCTGGAGCTGGCTTTATCATCAAAGATTTATACACTGAG
AATAAATTACTTGAGTATTCAGTAGAAGTAGGAACAAAAACTATCAATTAATCTGAGTAT
CTAGCTTTAATCTATGGAATGTATACTTGCTATAAGCTAGGTATTAAGCAGCTTACAATT
TAAGGTGACTCTGAAGTTGTGATAAAACACATGTTAGGTGTTTACTAATGCAGAAGCTAA
CAGCTCAGAGAATACTATAATCTAGCTAAAATTTTAGATGAGCTTTTCCATTTTAAGGAC
TACGTTTAAGTAAAAAAAGAGCTTAACACTGAAGCTGATGCACTAGCCAATCTAGCACTT
AGTTGA

>TTHERM_00283900(gene)
ATGTGCTATAAGTGCCTTCCTGATCATAGTCTCCATTCTGAATAGATTGTTTAGCTTGAT
AACTTAAGTGATAAAAAAAACTTGGATTGCCAAGAGAATATCAATAGCTCTATAGACAGC
AACAAAAATAATAAGCAGGGAGTCAGTCCACTTAAGGTAAATAGCGAATTCAATGGATCT
CCTTTTATGTTAAATAATCTAGCTAACTTAAAAATAAACTCCAGCTCATAGGAGCCTTCA
GATTAAAACGTAAAAAGAAGTAGTGTTAAAAATAGTTTTAGCAAAGTAAAAGAATTCAAT
TCAACATCTAACATAGAAGAAGAAATACTTGACTAGGGTCAAATCAAGCAAAAAAAGAAA
AAATCTAGCATTTCTCTTGATAAGCCAGAAAAATAAATACAACTTAACAATAATACACAA
AGTAGAAAATAAGAATTTAGAGATGTGTTTGTAATTAAAGAAGAAAATATGGATGATGAT
TATACAAACTGTAAAATTGAGAATGGTGGTAATTCTCATTTGAAAAACACTAATGCTTTA
CCTCAAAATGGAAAGAAATATTCTAAAGAGTCTGCTCAAACTAAAGTTTTTGGGACAGAT
ATGTTGTCACAAATTTCCAGACAAAAAGGTAGTAGTTCCTAAAAAAACATAAATCAGTTA
CTAAGTTAAGCTTCCACAGTATCTCCAAGCATCTAACCTGTTGAGAAGAGTATGATGGAT
GTGATTTCTAATACAACTAATTATTATCCATAATATCCCTTCTATCCTCCTCATAATCCT
TATGAAAATCCTTTCTAATTTAGCACTAATTTTAATCCAGGCCACTAAATGACTTATCCT
CATCCACATCCTTAAGGGTACCCACCAAATTAGGTAAATGCGCCTTTTTCTCACCTCTAT
AACCAGTAACATAATTTTAACAATATGCCTCCTTACTATCCTCCTACTCGTTCTTCTTAT
ATGCCAAGCTTTAACCATAATTATTAGTAGAACCACATGCTTTAAGAGTAAGAAACTAAA
GAATAATATCATACTATATCTGATTCCAGTTCTAGTGATAAATATTTTTCAAAAAAAGAT
AAATTAAGTAATGAAAGAAGTCTCTAAAGAAATTAAATGAAAAATGACAAAATAGATTTT
GTTTCATCTGATGAATCTTTGCAATAATAAGAATAGACAGCTACAGACTTTTTTTAAAAT
GGAGCTCTCTCTGAGTTGATTAAGCAAAACGAAAACATTCAAAAGATATGTGTTTATCTT
AGAACTTTAAATGACATTAAAATGTCAGTATGCACTAAAATTGAGGCCATGAAGAATAAA
TTCCTACAACAAATATAAATGAAAGAATAAGATTTCAGTTATGCATTTTTGGCAAATACT
TTCAACCAAAATAATAACTAAGTAGAAGAAAACTTAAAGAGCTACTTTGCAAAAATACAG
CAACTAAATTCCTTTTTTGAAAAGAATTAACTAAGCTACAACCCTTAAGCTGCTAGCAAA
TAGAAACTAAGCTAGATTGAATAAGAACTTGATAGAATGCTTTTTTTTACTATTGAGAAA
ATAGATTAGGAAACTTTAAATTAAACTAAACTAATCAAGTAAGAACATATTGACCCTTTC
AAAGATAATTCAGAGTATGAAGAATTAACATAATTTTATCAAAACTAACCTGCTAATATT
GATGCAATCAAAGACAAAATAAACTTTTATTCTTAGTGTTAGCTCGAATTTGATGGAACA
TCAAAAGGAAACCCTGGAAGATCTGGAGCTGGCTTTATCATCAAAGATTTATACACTGAG
AATAAATTACTTGAGTATTCAGTAGAAGTAGGAACAAAAACTATCAATTAATCTGAGTAT
CTAGCTTTAATCTATGGAATGTATACTTGCTATAAGCTAGGTATTAAGCAGCTTACAATT
TAAGGTGACTCTGAAGTTGTGATAAAACACATGTTAGGTGTTTACTAATGCAGAAGCTAA
CAGCTCAGAGAATACTATAATCTAGCTAAAATTTTAGATGAGCTTTTCCATTTTAAGGAC
TACGTTTAAGTAAAAAAAGAGCTTAACACTGAAGCTGATGCACTAGCCAATCTAGCACTT
AGTTGA

>TTHERM_00283900(protein)
MCYKCLPDHSLHSEQIVQLDNLSDKKNLDCQENINSSIDSNKNNKQGVSPLKVNSEFNGS
PFMLNNLANLKINSSSQEPSDQNVKRSSVKNSFSKVKEFNSTSNIEEEILDQGQIKQKKK
KSSISLDKPEKQIQLNNNTQSRKQEFRDVFVIKEENMDDDYTNCKIENGGNSHLKNTNAL
PQNGKKYSKESAQTKVFGTDMLSQISRQKGSSSQKNINQLLSQASTVSPSIQPVEKSMMD
VISNTTNYYPQYPFYPPHNPYENPFQFSTNFNPGHQMTYPHPHPQGYPPNQVNAPFSHLY
NQQHNFNNMPPYYPPTRSSYMPSFNHNYQQNHMLQEQETKEQYHTISDSSSSDKYFSKKD
KLSNERSLQRNQMKNDKIDFVSSDESLQQQEQTATDFFQNGALSELIKQNENIQKICVYL
RTLNDIKMSVCTKIEAMKNKFLQQIQMKEQDFSYAFLANTFNQNNNQVEENLKSYFAKIQ
QLNSFFEKNQLSYNPQAASKQKLSQIEQELDRMLFFTIEKIDQETLNQTKLIKQEHIDPF
KDNSEYEELTQFYQNQPANIDAIKDKINFYSQCQLEFDGTSKGNPGRSGAGFIIKDLYTE
NKLLEYSVEVGTKTINQSEYLALIYGMYTCYKLGIKQLTIQGDSEVVIKHMLGVYQCRSQ
QLREYYNLAKILDELFHFKDYVQVKKELNTEADALANLALS