Identifiers and Description

Gene Model Identifier

TTHERM_00294660

Standard Name

XLF1 (XRCC4-like factor)

Aliases

PreTt15576 | 27.m00236 | 3692.m00039

Description

hypothetical protein; XLF family protein; assists in annealing broken ends of DNA in the non-homologous end joining (NHEJ) pathway

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• micronucleus (IDA) | GO:0031040

Biological Process

• double-strand break repair via single-strand annealing (IDA) | GO:0045002

Domains

• ( PF05175 ) Methyltransferase small domain
• ( PF08241 ) Methyltransferase domain
• ( PF09302 ) XLF N-terminal domain
• ( TIGR00536 ) methyltransferase, HemK family
• ( TIGR00537 ) methylase, putative
• ( TIGR03386 ) protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
• ( TIGR03387 ) protein-(glutamine-N5) methyltransferase, release factor-specific

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_08721.1	2.0009778678102968e-172
	Description: hypothetical protein (581 aa)
WormBase	WBGene00006526	2.0009778678102968e-172
	Description: locus:tax-4 Cyclic nucleotide-gated cation channel status:Confirmed UniProt:Q03611 protein_id:CAB63418.2
Oxytricha	Contig19116.0.1.g101	0.00000000000059990805086298
	Description: hypothetical protein
DictyBase	DDB_G0284785	0.000009999254677478949
	Description: nhej1 on chromosome: 4 position 2481017 to 2482785

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00294660(coding)
ATGTACGCTTAAACACTCTCTGAAGCTTTAACTTTGAATGAAATTATTTTTTTAAAAAAG
TAAATTTGGTGGACTGGCTGTACTGAAACACCATTTATATGTCGTGGAGGAGTTTATAAT
AAAAATAGCTATCTTTTAGTGATCACAGATACACGTAATGTATGGGTAACAAAGGCAGAT
GATTAACAGATTATAGATGAGAAAGATAAATTTAACTAATCAATAAAGATAAAATTTGAA
GATATTTTGAATACTCTTGATACTCCACTCAGATTTGGTAGAAGCAATACTTAATTTACA
AAGCTATAATTCAGAAAAAATAGAGAAGAAGATCTAATTTTCTTAATGGAATTTTAAGTA
GGAATTTATCCTTTCAAATGGGAGTTCTTTTTAACAAAGATGGATGATAGCGAAATTTTT
AATATTTTAGCTGATGATTTATTAAATCCTATGGCTAAAACAATAATGTCTCTTGAAAAA
AGAGGAAACTTGTATAAATAAAAATGTATTCAAATAGAAAAAGAGTTGTTAAGACGCTTA
AGCGAAAAGGAGAGAAATACATATCTTTCCTCCATTGATAAAGATAATGAGGAAGTTTGG
TCAAATTTCTTAATAGTAGATTCTTAAGATGATAAACTGACAAATTTTGACTTTGGTCCA
GCCGCTTAATTCTTTCTGTCAAATCACAACTCCAAAAATTTAATTTAAGATTAAGAAAAT
AAAAAAATTACAGCCAATTAGTAAAATGATATAATGGACAACAACGAAGACTTAAAAAGA
ATGAAATTAATTTAAGATTATTTTAGCACCTTTGAAGAATAGCCTTTGCCAAATGCTTAT
TTAAGACCAGATTCTAAAAAGAAATTTAAATAATAAGAAGAAAACAACTAATTAAAATAC
AAATAATAATAGCTAGGAATCAAAGTCAATTATGAAGAATAAAATGAAAATAAAATTGCT
AATGAGTAAGTATAAATATAAATTTAACAGAATGTTCAAAAAGAAGAAAAGAAAAAGAAA
AAGCGTTTAGATTTCTTATGA

>TTHERM_00294660(gene)
ATGTACGCTTAAACACTCTCTGAAGCTTTAACTTTGAATGAAATTATTTTTTTAAAAAGT
AAATATGGTCTAATTTAGCAAAATTTGCTATCGTTTATATATAATTAATTTAAAAATTAG
AGTAAATTTGGTGGACTGGCTGTACTGAAACACCATTTATATGTCGTGGAGGAGTTTATA
ATAAAAATAGCTATCTTTTAGGTAAATTGGTTTGATGATATATGCATTATTTATTCATAA
AAGAAAGCTAAGTTGTAGCTATTTTAAATTAACATAATAGTGATCACAGATACACGTAAT
GTATGGGTAACAAAGGCAGATGATTAACAGATTATAGATGAGAAAGATAAATTTAACTAA
TCAATAAAGATAAAATTTGAAGATATTTTGAATACTCTTGATACTCCACTCAGATTTGGT
AGAAGCAATACTTAATTTACAAAGCTATAATTCAGAAAAAATAGAGAAGAAGATCTAATT
TTCTTAATGGAATTTTAAGTAGGAATTTATCCTTTCAAATGGGAGTTCTTTTTAACAAAG
ATGGATGATAGCGAAATTTTTAATATTTTAGCTGATGATTTATTAAATCCTATGGCTAAA
ACAATAATGTCTCTTGAAAAAAGAGGAAACTTGTATAAATAAAAATGTATTCAAATAGAA
AAAGAGTTGTTAAGACGCTTAAGCGAAAAGGAGAGAAATACATATCTTTCCTCCATTGAT
AAAGATAATGAGGAAGTTTGGTCAAATTTCTTAATAGTAGATGTAAATGAAAAAAATAAA
TTACTATTTATCATACAAACTCTATTTGTTGGGTTGGTCAAAAATTTGACCTTTATCTTA
TACCCTCCCTTATTTAATCAACATAATTAATTAATCCTAACCTATTGTTTAAAAAGATAT
TTTTAATTTAAAGTCTTAAGATGATAAACTGACAAATTTTGACTTTGGTCCAGCCGCTTA
ATTCTTTCTGTCAAATCACAACTCCAAAAATTTAAGTAGTCATTTTCAGTAAAAAAGCTA
ATAACTTACTTATTTTTTAATATTAATATTAGTTTAAGATTAAGAAAATAAAAAAATTAC
AGCCAATTAGTAAAATGATATAATGGACAACAACGAAGACTTAAAAAGAATGAAATTAAT
TTAAGATTATTTTAGCACCTTTGAAGAATAGCCTTTGCCAAATGCTTATTTAAGACCAGA
TTCTAAAAAGAAATTTAAATAATAAGAAGAAAACAACTAATTAAAATACAAATAATAATA
GCTAGGTATATTACTTACAACTAGGCTTTTTAATTTTTAAATTAAAATATAACTAAAGGA
ATCAAAGTCAATTATGAAGAATAAAATGAAAATAAAATTGCTAATGAGTAAGTATAAATA
TAAATTTAACAGAATGTTCAAAAAGAAGAAAAGAAAAAGAAAAAGCGTTTAGATTTCTTA
TGA

>TTHERM_00294660(protein)
MYAQTLSEALTLNEIIFLKKQIWWTGCTETPFICRGGVYNKNSYLLVITDTRNVWVTKAD
DQQIIDEKDKFNQSIKIKFEDILNTLDTPLRFGRSNTQFTKLQFRKNREEDLIFLMEFQV
GIYPFKWEFFLTKMDDSEIFNILADDLLNPMAKTIMSLEKRGNLYKQKCIQIEKELLRRL
SEKERNTYLSSIDKDNEEVWSNFLIVDSQDDKLTNFDFGPAAQFFLSNHNSKNLIQDQEN
KKITANQQNDIMDNNEDLKRMKLIQDYFSTFEEQPLPNAYLRPDSKKKFKQQEENNQLKY
KQQQLGIKVNYEEQNENKIANEQVQIQIQQNVQKEEKKKKKRLDFL