Identifiers and Description

Gene Model Identifier

TTHERM_00295340

Standard Name

RRM59 (RNA recognition motif-containing protein 59)

Aliases

PreTt15644 | 27.m00304 | 3692.m00107

Description

RRM59 polyadenylate-binding protein; polyadenylate-binding protein 2

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif
• ( PF00658 ) Poly-adenylate binding protein, unique domain
• ( TIGR01628 ) polyadenylate binding protein, human types

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_08800.1	9.997093137033517e-262
	Description: polyadenylate-binding protein 2 (610 aa)
WormBase	WBGene00006538	9.997093137033517e-262
	Description: locus:tbb-4 Tubulin beta-4 chain status:Partially_confirmed UniProt:P41937 protein_id:CAA86310.1
Oxytricha	Contig21044.0.g17	0.0000000000000299873730555305
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00003903	0.00000000000009996062864481225
	Description: locus:pab-2 status:Confirmed UniProt:Q19579 protein_id:CAA90444.1
WormBase	WBGene00002039	0.00000000000009996062864481225
	Description: locus:hum-6 Unconventional myosin heavy chain 6 status:Partially_confirmed UniProt:P91443 protein_id:CCD61190.1
SGD	YER165W	0.00000000019994075865167896
	Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
DictyBase	DDB_G0293558	0.0000000010002658722841845
	Description: pabpc1A on chromosome: 6 position 3041877 to 3044187

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00295340(coding)
ATGTTATAAACCGCCACTTAAAATTAGAGCACACTTTTAGTCCAATTGCTCCACGAAGGT
GTCACCAAGGAACTTATTTTCAAGGAGTTCAAGAAATTCGGTACTATCAAGTCATTGAAG
CACTTCCCTAAGAACAAAAGCGCCTTAGTTGAATTCTAATCTCCTGAAGAAGCAAAGAAT
GCTAAGCAATCCCTCAATCACAATAAGCTTTTGAACAAGGAAATTAATATTGTTAATTAC
CAAAACAAGGATGAACTTAAGCAAAAGAAAAAGTATAACTTATTCATTCACAATGTTCCT
TAAGATCTCGAAACTAACACTTTACACAATTTCATGTCTAAGTATGGTGAAATTACCTCT
CTTATGCTTAAGAAGAACGATGAAAACAAGAATTTAGGTTATGGTTACGTTTAATTCGAA
ACTGAAGAAGCCTACAATGAAATTTTGAAAGAACACGAGTTAAACGGTAAGATTTCTCTT
CCTAACTCTACCATCTCTTTCAATATCTAAAAGTTCAACGATAGCAACAAAAATAAGGCC
AACAACATCGTCATTCTTGGTTTATTCGAAAACGAAATCCCAGCTGATTAAAAGGAAGCC
AAGACCTAATCAATCAACGCCATTTTCGAGAAAATTAAGTAAGAACTCAATGTTCTTCAT
TTCAATTTCTACACTGAATACAATGAAAGCAAGAAGAACTTCTGGGTCAAGGTTGATTTC
CAATACGATGATGATAAGCAAGAAGAACACATTTATAAGACTGTTAAGGAATAAGTTTAA
AAGAATTTCTCTTACTCAGGAGCCTAAAACAAGGGACCTACCATTAACTTCAAGTCTAAT
GAAAGCAGTGAAAGAAATCTTTTCTTCTTAGGTGTCAAGATTGACATTAAGGAATAAGAC
ATTGCTGATTGGATTCAAAAGGCTATTGGTGTTTCTGTTCCTACTGAGAGCATTAAAATT
AAAAAGAGAACTAAACCCGCCAATGCTGACGATCAATTAAAAACTAACAATGTTTCAGTT
TTCTTTGATTCTTAGGCTGACGGTCAAAAGTTGATGATTTTCTGTGCTAAATAATCTAAT
AAAAACTCTGTTGATGAAATCTTCGACAACAGACACAAGGTCACTCTTTATCTCAAAAAG
AATGAACAAGAAAGTGTCTAAAAGTTGACTAAAAAAATTGGTGAATTCCAACAAAATAGC
ACTATGGGTAGCAACAAATTCTAAACTGACATTTAAGCTCCTAACCCAATTCACCCCTAT
GGATACCCTATTCCTATGTTCATGCCCCAATAAATCCCCTTCTAAAATTAATAACCAAAG
CTTATTAACATTCCTTCTATGTAACATAATAAGAAGATTTAAAACACTCCTTAACCAATT
GAACCTAAACCTCAAACTCTTATTGCTGTTCCTAATAAACCTGCTGCTCCTCAAAATATT
TTTATTTAGTTCGAAAAGGCTACTGCAGAAGAAAAGAAGAATAAAATTGAACAAATTACT
AATGCCATTTCAACTTAATTCAGCGATTTCGATAAGCTTCAAGATGAATCAAAGAGAAGT
ATTCTTGGTCAAATCATTTACTATAAAATTTCTGAACTTGATCTTGACAAGAATAGAAAA
ATCATGGAATATATCCCTGATGTTTAAAACGAAAACCAAGCTAGAGCTAAAATCGCTGAA
TTCAAACAACAAGTCCCCAAAATTACTGGTATGCTTATCGATACTGACGTCTTCGAAGTT
GCTGATATCGTCGACATCGTTAAAGACGAAAAGGAACTTATTGAAAGATGCAGTGAAGCT
ATCGATCTTATTATTAGTCAAAAGAAATGA

>TTHERM_00295340(gene)
ATGTTATAAACCGCCACTTAAAATTAGAGCACACTTTTAGTCCAATTGCTCCACGAAGGT
GTCACCAAGGAACTTATTTTCAAGGAGTTCAAGAAATTCGGTACTATCAAGTCATTGAAG
CACTTCCCTAAGAACAAAAGCGCCTTAGTTGAATTCTAATCTCCTGAAGAAGCAAAGAAT
GCTAAGCAATCCCTCAATCACAATAAGCTTTTGAACAAGGAAATTAATATTGTTAATTAC
CAAAACAAGGATGAACTTAAGCAAAAGAAAAAGTATAACTTATTCATTCACAATGTTCCT
TAAGATCTCGAAACTAACACTTTACACAATTTCATGTCTAAGTATGGTGAAATTACCTCT
CTTATGCTTAAGAAGAACGATGAAAACAAGAATTTAGGTTATGGTTACGTTTAATTCGAA
ACTGAAGAAGCCTACAATGAAATTTTGAAAGAACACGAGTTAAACGGTAAGATTTCTCTT
CCTAACTCTACCATCTCTTTCAATATCTAAAAGTTCAACGATAGCAACAAAAATAAGGCC
AACAACATCGTCATTCTTGGTTTATTCGAAAACGAAATCCCAGCTGATTAAAAGGAAGCC
AAGACCTAATCAATCAACGCCATTTTCGAGAAAATTAAGTAAGAACTCAATGTTCTTCAT
TTCAATTTCTACACTGAATACAATGAAAGCAAGAAGAACTTCTGGGTCAAGGTTGATTTC
CAATACGATGATGATAAGCAAGAAGAACACATTTATAAGACTGTTAAGGAATAAGTTTAA
AAGAATTTCTCTTACTCAGGAGCCTAAAACAAGGGACCTACCATTAACTTCAAGTCTAAT
GAAAGCAGTGAAAGAAATCTTTTCTTCTTAGGTGTCAAGATTGACATTAAGGAATAAGAC
ATTGCTGATTGGATTCAAAAGGCTATTGGTGTTTCTGTTCCTACTGAGAGCATTAAAATT
AAAAAGAGAACTAAACCCGCCAATGCTGACGATCAATTAAAAACTAACAATGTTTCAGTT
TTCTTTGATTCTTAGGCTGACGGTCAAAAGTTGATGATTTTCTGTGCTAAATAATCTAAT
AAAAACTCTGTTGATGAAATCTTCGACAACAGACACAAGGTCACTCTTTATCTCAAAAAG
AATGAACAAGAAAGTGTCTAAAAGTTGACTAAAAAAATTGGTGAATTCCAACAAAATAGC
ACTATGGGTAGCAACAAATTCTAAACTGACATTTAAGCTCCTAACCCAATTCACCCCTAT
GGATACCCTATTCCTATGTTCATGCCCCAATAAATCCCCTTCTAAAATTAATAACCAAAG
CTTATTAACATTCCTTCTATGTAACATAATAAGAAGATTTAAAACACTCCTTAACCAATT
GAACCTAAACCTCAAACTCTTATTGCTGTTCCTAATAAACCTGCTGCTCCTCAAAATATT
TTTATTTAGTTCGAAAAGGCTACTGCAGAAGAAAAGAAGAATAAAATTGAACAAATTACT
AATGCCATTTCAACTTAATTCAGCGATTTCGATAAGCTTCAAGATGAATCAAAGAGAAGT
ATTCTTGGTCAAATCATTTACTATAAAATTTCTGAACTTGATCTTGACAAGAATAGAAAA
ATCATGGAATATATCCCTGATGTTTAAAACGAAAACCAAGCTAGAGCTAAAATCGCTGAA
TTCAAACAACAAGTCCCCAAAATTACTGGTATGCTTATCGATACTGACGTCTTCGAAGTT
GCTGATATCGTCGACATCGTTAAAGACGAAAAGGAACTTATTGAAAGATGCAGTGAAGCT
ATCGATCTTATTATTAGTCAAAAGAAATGA

>TTHERM_00295340(protein)
MLQTATQNQSTLLVQLLHEGVTKELIFKEFKKFGTIKSLKHFPKNKSALVEFQSPEEAKN
AKQSLNHNKLLNKEINIVNYQNKDELKQKKKYNLFIHNVPQDLETNTLHNFMSKYGEITS
LMLKKNDENKNLGYGYVQFETEEAYNEILKEHELNGKISLPNSTISFNIQKFNDSNKNKA
NNIVILGLFENEIPADQKEAKTQSINAIFEKIKQELNVLHFNFYTEYNESKKNFWVKVDF
QYDDDKQEEHIYKTVKEQVQKNFSYSGAQNKGPTINFKSNESSERNLFFLGVKIDIKEQD
IADWIQKAIGVSVPTESIKIKKRTKPANADDQLKTNNVSVFFDSQADGQKLMIFCAKQSN
KNSVDEIFDNRHKVTLYLKKNEQESVQKLTKKIGEFQQNSTMGSNKFQTDIQAPNPIHPY
GYPIPMFMPQQIPFQNQQPKLINIPSMQHNKKIQNTPQPIEPKPQTLIAVPNKPAAPQNI
FIQFEKATAEEKKNKIEQITNAISTQFSDFDKLQDESKRSILGQIIYYKISELDLDKNRK
IMEYIPDVQNENQARAKIAEFKQQVPKITGMLIDTDVFEVADIVDIVKDEKELIERCSEA
IDLIISQKK