Identifiers and Description

Gene Model Identifier

TTHERM_00295340

Standard Name

RRM59 (RNA recognition motif-containing protein 59)

Aliases

PreTt15644 | 27.m00304 | 3692.m00107

Description

RRM59 polyadenylate-binding protein; polyadenylate-binding protein 2

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF00658 ) Poly-adenylate binding protein, unique domain
  • ( TIGR01628 ) polyadenylate binding protein, human types

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_08800.1 9.997093137033517e-262
Description: polyadenylate-binding protein 2 (610 aa)
Oxytricha Contig21044.0.g17 0.0000000000000299873730555305
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase WBGene00003903 0.00000000000009996062864481225
Description: locus:pab-2 status:Confirmed UniProt:Q19579 protein_id:CAA90444.1
SGD YER165W 0.00000000019994075865167896
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
DictyBase DDB_G0293558 0.0000000010002658722841845
Description: pabpc1A on chromosome: 6 position 3041877 to 3044187

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00295340(coding)
ATGTTATAAACCGCCACTTAAAATTAGAGCACACTTTTAGTCCAATTGCTCCACGAAGGT
GTCACCAAGGAACTTATTTTCAAGGAGTTCAAGAAATTCGGTACTATCAAGTCATTGAAG
CACTTCCCTAAGAACAAAAGCGCCTTAGTTGAATTCTAATCTCCTGAAGAAGCAAAGAAT
GCTAAGCAATCCCTCAATCACAATAAGCTTTTGAACAAGGAAATTAATATTGTTAATTAC
CAAAACAAGGATGAACTTAAGCAAAAGAAAAAGTATAACTTATTCATTCACAATGTTCCT
TAAGATCTCGAAACTAACACTTTACACAATTTCATGTCTAAGTATGGTGAAATTACCTCT
CTTATGCTTAAGAAGAACGATGAAAACAAGAATTTAGGTTATGGTTACGTTTAATTCGAA
ACTGAAGAAGCCTACAATGAAATTTTGAAAGAACACGAGTTAAACGGTAAGATTTCTCTT
CCTAACTCTACCATCTCTTTCAATATCTAAAAGTTCAACGATAGCAACAAAAATAAGGCC
AACAACATCGTCATTCTTGGTTTATTCGAAAACGAAATCCCAGCTGATTAAAAGGAAGCC
AAGACCTAATCAATCAACGCCATTTTCGAGAAAATTAAGTAAGAACTCAATGTTCTTCAT
TTCAATTTCTACACTGAATACAATGAAAGCAAGAAGAACTTCTGGGTCAAGGTTGATTTC
CAATACGATGATGATAAGCAAGAAGAACACATTTATAAGACTGTTAAGGAATAAGTTTAA
AAGAATTTCTCTTACTCAGGAGCCTAAAACAAGGGACCTACCATTAACTTCAAGTCTAAT
GAAAGCAGTGAAAGAAATCTTTTCTTCTTAGGTGTCAAGATTGACATTAAGGAATAAGAC
ATTGCTGATTGGATTCAAAAGGCTATTGGTGTTTCTGTTCCTACTGAGAGCATTAAAATT
AAAAAGAGAACTAAACCCGCCAATGCTGACGATCAATTAAAAACTAACAATGTTTCAGTT
TTCTTTGATTCTTAGGCTGACGGTCAAAAGTTGATGATTTTCTGTGCTAAATAATCTAAT
AAAAACTCTGTTGATGAAATCTTCGACAACAGACACAAGGTCACTCTTTATCTCAAAAAG
AATGAACAAGAAAGTGTCTAAAAGTTGACTAAAAAAATTGGTGAATTCCAACAAAATAGC
ACTATGGGTAGCAACAAATTCTAAACTGACATTTAAGCTCCTAACCCAATTCACCCCTAT
GGATACCCTATTCCTATGTTCATGCCCCAATAAATCCCCTTCTAAAATTAATAACCAAAG
CTTATTAACATTCCTTCTATGTAACATAATAAGAAGATTTAAAACACTCCTTAACCAATT
GAACCTAAACCTCAAACTCTTATTGCTGTTCCTAATAAACCTGCTGCTCCTCAAAATATT
TTTATTTAGTTCGAAAAGGCTACTGCAGAAGAAAAGAAGAATAAAATTGAACAAATTACT
AATGCCATTTCAACTTAATTCAGCGATTTCGATAAGCTTCAAGATGAATCAAAGAGAAGT
ATTCTTGGTCAAATCATTTACTATAAAATTTCTGAACTTGATCTTGACAAGAATAGAAAA
ATCATGGAATATATCCCTGATGTTTAAAACGAAAACCAAGCTAGAGCTAAAATCGCTGAA
TTCAAACAACAAGTCCCCAAAATTACTGGTATGCTTATCGATACTGACGTCTTCGAAGTT
GCTGATATCGTCGACATCGTTAAAGACGAAAAGGAACTTATTGAAAGATGCAGTGAAGCT
ATCGATCTTATTATTAGTCAAAAGAAATGA


>TTHERM_00295340(gene)
ATGTTATAAACCGCCACTTAAAATTAGAGCACACTTTTAGTCCAATTGCTCCACGAAGGT
GTCACCAAGGAACTTATTTTCAAGGAGTTCAAGAAATTCGGTACTATCAAGTCATTGAAG
CACTTCCCTAAGAACAAAAGCGCCTTAGTTGAATTCTAATCTCCTGAAGAAGCAAAGAAT
GCTAAGCAATCCCTCAATCACAATAAGCTTTTGAACAAGGAAATTAATATTGTTAATTAC
CAAAACAAGGATGAACTTAAGCAAAAGAAAAAGTATAACTTATTCATTCACAATGTTCCT
TAAGATCTCGAAACTAACACTTTACACAATTTCATGTCTAAGTATGGTGAAATTACCTCT
CTTATGCTTAAGAAGAACGATGAAAACAAGAATTTAGGTTATGGTTACGTTTAATTCGAA
ACTGAAGAAGCCTACAATGAAATTTTGAAAGAACACGAGTTAAACGGTAAGATTTCTCTT
CCTAACTCTACCATCTCTTTCAATATCTAAAAGTTCAACGATAGCAACAAAAATAAGGCC
AACAACATCGTCATTCTTGGTTTATTCGAAAACGAAATCCCAGCTGATTAAAAGGAAGCC
AAGACCTAATCAATCAACGCCATTTTCGAGAAAATTAAGTAAGAACTCAATGTTCTTCAT
TTCAATTTCTACACTGAATACAATGAAAGCAAGAAGAACTTCTGGGTCAAGGTTGATTTC
CAATACGATGATGATAAGCAAGAAGAACACATTTATAAGACTGTTAAGGAATAAGTTTAA
AAGAATTTCTCTTACTCAGGAGCCTAAAACAAGGGACCTACCATTAACTTCAAGTCTAAT
GAAAGCAGTGAAAGAAATCTTTTCTTCTTAGGTGTCAAGATTGACATTAAGGAATAAGAC
ATTGCTGATTGGATTCAAAAGGCTATTGGTGTTTCTGTTCCTACTGAGAGCATTAAAATT
AAAAAGAGAACTAAACCCGCCAATGCTGACGATCAATTAAAAACTAACAATGTTTCAGTT
TTCTTTGATTCTTAGGCTGACGGTCAAAAGTTGATGATTTTCTGTGCTAAATAATCTAAT
AAAAACTCTGTTGATGAAATCTTCGACAACAGACACAAGGTCACTCTTTATCTCAAAAAG
AATGAACAAGAAAGTGTCTAAAAGTTGACTAAAAAAATTGGTGAATTCCAACAAAATAGC
ACTATGGGTAGCAACAAATTCTAAACTGACATTTAAGCTCCTAACCCAATTCACCCCTAT
GGATACCCTATTCCTATGTTCATGCCCCAATAAATCCCCTTCTAAAATTAATAACCAAAG
CTTATTAACATTCCTTCTATGTAACATAATAAGAAGATTTAAAACACTCCTTAACCAATT
GAACCTAAACCTCAAACTCTTATTGCTGTTCCTAATAAACCTGCTGCTCCTCAAAATATT
TTTATTTAGTTCGAAAAGGCTACTGCAGAAGAAAAGAAGAATAAAATTGAACAAATTACT
AATGCCATTTCAACTTAATTCAGCGATTTCGATAAGCTTCAAGATGAATCAAAGAGAAGT
ATTCTTGGTCAAATCATTTACTATAAAATTTCTGAACTTGATCTTGACAAGAATAGAAAA
ATCATGGAATATATCCCTGATGTTTAAAACGAAAACCAAGCTAGAGCTAAAATCGCTGAA
TTCAAACAACAAGTCCCCAAAATTACTGGTATGCTTATCGATACTGACGTCTTCGAAGTT
GCTGATATCGTCGACATCGTTAAAGACGAAAAGGAACTTATTGAAAGATGCAGTGAAGCT
ATCGATCTTATTATTAGTCAAAAGAAATGA


>TTHERM_00295340(protein)
MLQTATQNQSTLLVQLLHEGVTKELIFKEFKKFGTIKSLKHFPKNKSALVEFQSPEEAKN
AKQSLNHNKLLNKEINIVNYQNKDELKQKKKYNLFIHNVPQDLETNTLHNFMSKYGEITS
LMLKKNDENKNLGYGYVQFETEEAYNEILKEHELNGKISLPNSTISFNIQKFNDSNKNKA
NNIVILGLFENEIPADQKEAKTQSINAIFEKIKQELNVLHFNFYTEYNESKKNFWVKVDF
QYDDDKQEEHIYKTVKEQVQKNFSYSGAQNKGPTINFKSNESSERNLFFLGVKIDIKEQD
IADWIQKAIGVSVPTESIKIKKRTKPANADDQLKTNNVSVFFDSQADGQKLMIFCAKQSN
KNSVDEIFDNRHKVTLYLKKNEQESVQKLTKKIGEFQQNSTMGSNKFQTDIQAPNPIHPY
GYPIPMFMPQQIPFQNQQPKLINIPSMQHNKKIQNTPQPIEPKPQTLIAVPNKPAAPQNI
FIQFEKATAEEKKNKIEQITNAISTQFSDFDKLQDESKRSILGQIIYYKISELDLDKNRK
IMEYIPDVQNENQARAKIAEFKQQVPKITGMLIDTDVFEVADIVDIVKDEKELIERCSEA
IDLIISQKK