Identifiers and Description

Gene Model Identifier

TTHERM_00297140

Standard Name

RPL23 (Ribosomal Protein of the Large subunit #23)

Aliases

PreTt15725 | 27.m00385 | 3692.m00187 | RPL14

Description

RPL23 60S ribosomal protein L23; Homolog of Yeast RPL23- Human RPL23- Bacteria RPL14; Ribosomal protein L14p/L23e containing protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• asparagine metabolic process (IEA) | GO:0006528
• negative regulation of biosynthetic process (IEA) | GO:0009890
• pyrimidine ribonucleotide catabolic process (IEA) | GO:0009222

Domains

• ( PF00238 ) Ribosomal protein L14p/L23e
• ( TIGR01067 ) ribosomal protein L14

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_08866.1	1.9995541014149208e-99
	Description: ribosomal protein L14p/L23e containing protein (142 aa)
WormBase	WBGene00004435	5.001369568193564e-73
	Description: locus:rpl-23 60S ribosomal protein L23 status:Confirmed UniProt:P48158 protein_id:CCD61530.1
SGD	YER117W	2.999277470785175e-69
	Description: RPL23B Protein component of the large (60S) ribosomal subunit, identical to Rpl23Ap and has similarity to E. coli L14 and rat L23 ribosomal proteins
DictyBase	DDB_G0290315	2.9995010303521745e-64
	Description: rpl23 on chromosome: 5 position 3946402 to 3947228
Oxytricha	Contig861.1.g24	1.0002758036576784e-62
	Description: Ribosomal protein L14p/L23e
Stentor Coeruleus	SteCoe_34785	4.359610000063081e-28
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00297140(coding)
ATGGCTGCTGCTAGAGGTAGAGGTGGTTAAGTCGGTACCAAGGCTAAAGTTTCCTTGGGT
CTTCCCGTCGGTGCTGTTATGAACTGCGCTGATAACTCCGGTGCTAAGAACTTATATACT
ATTGCTTGTTTCGGTATCAAGGGTCACTTGAGCAAGCTCCCCAGTGCTTCCATTGGTGAT
ATGATTCTCTGCTCCGTCAAGAAGGGTTCCCCCAAGCTCAGAAAGAAAGTTCTCTAAGCT
ATCGTCATCAGACAAAGAAGACCCTGGAGAAGAAGAGATGGTGTCTTCATCTACTTCGAA
GATAATGCTGGTGTTATTGCTAACCCCAAGGGTGAAATGAAGGGTTCCCAAATCACTGGT
CCCGTCGCCAAGGAATGTGCTGACATCTGGCCCAAGGTTGCTTCCAACGCTGGTTCCGTT
GTTTGA

>TTHERM_00297140(gene)
ATGGCTGCTGCTAGAGGTAATTTTAACTTAAATTTGTATTGATCAATTTCACAAATTTTT
CATCCAGCCAGCTCAATGTTTTCGCATCATCATAAAGTCTCATAAAAAATATGGAAGCAC
TAATTGCAGTTAAATGCCTTTATACAAAGCTAAAATTTTCATTAAATTCTACAGATTTAT
AAGGAAATGTCTCTTTGATGCAAATAATAATTTGATGTTAAAATTAATATTTAATATGAA
TTGAGATAAGCAAAAAAAGTGGGCCTGATAAGCTTATGAATTTATATAAAGCGAATAAAA
TGCAGGATATTTAAATTAATTAGATAGATGTGTTGGACTTTGAAAAGTTGGATGAAAAAT
TGAATTTTAGGAGAAGATAAACAAACCATTAATTGATATTGATTAATTTGGTTGTTTTTC
ATAAATACAAAATTTTAAAATATGGATTAATTGAAATTAAATTTAAATTACTTAAATTAT
AGGTAGAGGTGGTTAAGTCGGTACCAAGGCTAAAGTTTCCTTGGGTCTTCCCGTCGGTGC
TGTTATGAACTGCGCTGATAACTCCGGTGCTAAGAACTTATATACTATTGCTTGTTTCGG
TATCAAGGGTCACTTGAGCAAGCTCCCCAGTGCTTCCATTGGTGATATGATTCTCTGCTC
CGTCAAGAAGGGTTCCCCCAAGCTCAGAAAGAAAGGTAAACTATAAAATAACAATTTTTA
AAAACTAATTCTAATTTAATTATTTAACTAATAGTTCTCTAAGCTATCGTCATCAGACAA
AGAAGACCCTGGAGAAGAAGAGATGGTGTCTTCATCTACTTCGAAGGTGAATAATTTTAA
ATATTTTAAATACAAGGCATAAAATGAAAACGAAAAAATCATTAATCCCAATTTATTAAA
AAAGTGATAAGTCTTGCAAAGATGTTATTAAATAATTACAAATATAAAGATGAGTAGATT
AGGCAAAAATAATAAAAATTAAATCATTAGTAATAACTAAATAGAGTATAGTTATCAAAT
CAAAATAAATTAAGCCTTATGTCGTGTTACATAAGAGAAAAATTAGCATTAAAAATAATA
TTGTAGAAAATTTGACAAATGTCACTCACTCACTATCTTCTTATTCAAGACTTTATCAGC
AAATAAATATATTCAAATTTAGCTTCAGAAAATGCTAAGTAGAATTTATAGCATTATTTT
ATTAATTGGTAAAAATAGAATCAATCAATAAATAAATAAATTATTGACTAAATATTTGTT
TATTTTACCAATTTAGAAATAAATAGAGGGATAAATGAATTTTTTCATTTTACATTGAAC
ATCTTTAATATTTTTTTGGAATAAGTATTCAATTTTTTTTTTATTTATATAGATAATGCT
GGTGTTATTGCTAACCCCAAGGGTGAAATGAAGGGTTCCCAAATCACTGGTCCCGTCGCC
AAGGAATGTGCTGACATCTGGCCCAAGGTTGCTTCCAACGCTGGTTCCGTTGTTTGA

>TTHERM_00297140(protein)
MAAARGRGGQVGTKAKVSLGLPVGAVMNCADNSGAKNLYTIACFGIKGHLSKLPSASIGD
MILCSVKKGSPKLRKKVLQAIVIRQRRPWRRRDGVFIYFEDNAGVIANPKGEMKGSQITG
PVAKECADIWPKVASNAGSVV