Identifiers and Description

Gene Model Identifier

TTHERM_00318730

Standard Name

RRM10 (RNA Recognition Motif-containing protein 10)

Aliases

PreTt21074 | 31.m00376 | 3687.m00177

Description

RRM10 RNA recognition motif protein

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF02178 ) AT hook motif
  • ( PF06495 ) Fruit fly transformer protein
  • ( TIGR01622 ) splicing factor, CC1-like family
  • ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_40998.1 1.999658401959794e-176
Description: hypothetical protein (367 aa)
Oxytricha Contig5669.0.0.g96 9.996273942859018e-26
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase WBGene00006697 7.000924640675686e-24
Description: locus:uaf-1 Splicing factor U2AF 65 kDa subunit status:Confirmed UniProt:P90978 protein_id:CCD62280.1
Stentor Coeruleus SteCoe_31965 4.248354255291589e-18
Description: None
DictyBase DDB_G0286395 0.000000004999139696582238
Description: u2af2 on chromosome: 4 position 4405482 to 4407497

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00318730(coding)
ATGTATTTTAATTTGTTTAAACTTTATTTGCTTACTTTAAGTAATTTTTTATTTTTATAA
AATGAATTATTAGTTTTTTTGTTAAAAAAGGCTTATAGACATATAGTTTTATAAGATATT
TACTATTTATTATTCAATTCTAATAAAGATATATCTATCAGTCAATCAATCAAATATAAT
CAATTAATCTTAAAAACCTTTCTTCAATCTAAATTTGTTGAATTAGATAGCTAGCTATAT
ATAAATAGGATTGATTAAAAATAAATGAGTTCAAGCAGAGAGAGAAAAAGATCAGATTCT
AGATCTAAAAAGGACAAAAAAGACAAGAAAGATAAAAAGGAGAAAAAGGACAAGAAAGAT
AAGAAAGAGCATAAAGAACATAAAGAAAGAAGAGACTCAAGGGAAAAAAAGTCTAAAAAA
GAATCAAAAGACCGTAGAGATAGAAAAGAAAGTAGGGATAGAGAAGAAAAGAAGGATAAA
AAAGATAAAAAGGATAAAAAGAAAAGAGATAAATCTGAAGATAGAAAAAGGAGAAGTAAC
TCTTATCATTAAAAAAGAAAAAGGTCTTCTACTAAGAGTAGCTCTAGAGGCAGAAAAAGA
TCTCAGCCTTAAAGAGGGTAAAATTTTGGATTTGCGTTTGATAGTCCTCCAAAAGAAATC
ACATAGAAAGAAGAACCTGCATAAAGTTAAGAAGTCGTTAATGACTTTTCAAATGTCATA
AACAATCCTAATTTTAATCCTAAGTTCAAAGAATTATTTATGAAGTTATAGAATAGCAAA
CTGCCTGATTTATAAAATTCAAAGTGCGATAGAAAACTTTATATAGGAAATATTCCTCCT
GGTTTATAGCCAGTTAAATGTTAATTGATGATCAACAGTGCTCTAAAGCAACTCAAAGTC
AATTAAGAACCTGGTGATTCTTGCGTCAGTATATGGATAAGTCCAGAAGGGAATTATGGT
TTTGCAGAGTTTAGAACACCTGACGAAGCAACAAAAGCTCTTAATGCATTAGTTAATGTA
ACATTATTGGGATAACCATTAAAGGTAGGGAGACCTGCACAATATACAAAATCTTCAACT
GAAGTTTCATCAAGTGGAGCCAATTCTGGTGCAACTGGTTTTTCTTCAAGTGGTCGTTTT
GATATTCTTAGTTTGTTAGATCCTAATGGCTAAAAAAAGGACTAAGAAGAAGCTGAAGGT
GCATAATAAGCTGCAAATTTAACTTTGATCCCAGGATTAGAGGCTGCTCCACCTGTAACA
AATAAAAATATGATAAGTTTAAAAGTGTAAATACCAACTAGAATCCTTGTTTTACACAAT
ATGATTGCAGATGGTGAATTAATTATTGATGAAGAATTCAGATAAATAGAAGAAGATGTA
AAAGAAGAATGTTCAAAGCATGGTAAAGTAGTAAAAATAACTATTCCAAGACCTAGCGAT
TCAAATGAATAAGTAAAAGGCTAAGGCCGTATTTTTGTAGAATATGAAAATACTGATGCA
GCAAGAGATGCAAGAAGAGATCTAAATGGTAGATTATTTAACAATAGAACTGTTCAAGTA
TAATACTTCAGCGAGCAAAAATATTTAGATGGGGAACTGGATTTTAGAATAAGATGA


>TTHERM_00318730(gene)
ATGTATTTTAATTTGTTTAAACTTTATTTGCTTACTTTAAGTAATTTTTTATTTTTATAA
AATGAATTATTAGTTTTTTTGTTAAAAAAGGCTTATAGACATATAGTTTTATAAGATATT
TACTATTTATTATTCAATTCTAATAAAGATATATCTATCAGTCAATCAATCAAATATAAT
CAATTAATCTTAAAAACCTTTCTTCAATCTAAATTTGTTGAATTAGATAGCTAGCTATAT
ATAAATAGGATTGATTAAAAATAAATGAGTTCAAGCAGAGAGAGAAAAAGATCAGAGTAA
ACTTATTTGCATGATCAAAAATAATTAAGCATGGAATTAAAAACCATTTTATAAAGTTCT
AGATCTAAAAAGGACAAAAAAGACAAGAAAGATAAAAAGGAGAAAAAGGACAAGAAAGAT
AAGAAAGAGCATAAAGAACATAAAGAAAGAAGAGACTCAAGGGAAAAAAAGTCTAAAAAA
GAATCAAAAGACCGTAGAGATAGAAAAGAAAGTAGGGATAGAGAAGAAAAGAAGGATAAA
AAAGATAAAAAGGATAAAAAGAAAAGGTAAATTTTAAATTATTATGAAATAGTGCTCATG
ATTTTATATCAATAATAGAGATAAATCTGAAGATAGAAAAAGGAGAAGTAACTCTTATCA
TTAAAAAAGGTAATCACTTAGCAATAAATAAGCTTTGAGCAATTAGCAGTAAAATTTTAT
TTAAAGAAAAAGGTCTTCTACTAAGAGTAGCTCTAGAGGCAGAAAAAGATCTCAGCCTTA
AAGAGGGTACTTATTAAAAAATAGTAAATTAGGTTTTATCATAAAATATTTTCAATATAT
TCAATAGGTAAAATTTTGGATTTGCGTTTGATAGTCCTCCAAAAGAAATCACATAGAAAG
AAGAACCTGCATAAAGTTAAGAAGTCGTTAATGACTTTTCAAATGTCATAAACAATCCTA
ATTTTAATCCTAAGTTCAAAGAATTATTTATGAAGTTATAGAATAGCAAACTGCCTGATT
TATAAAATTCAAAGTGCGATAGAAAACTTTATATAGGAAATATTCCTCCTGGTTTATAGC
CAGTTAAAGTAATTTCTAAAAACAAAAATATTTTCAAATATTAAAATATTTAAAAAATTA
GTGTTAATTGATGATCAACAGTGCTCTAAAGCAACTCAAAGTCAATTAAGAAGTAATTAA
TTAATTAATTTATATAAATTAATAGATTAAATTATATATTTTTATTTTAAAATACTTAGA
CGGTAAATTTAAGTTCTTCACACAGAATTCATAAGTTCTTTAAAATTAAGTTTATTAAAT
TTAATTTTTATATATTAGCCTGGTGATTCTTGCGTCAGTATATGGATAAGTCCAGAAGGT
ACCTTCTTTTCTTTTCTTTAATTATTAATATTAAAGATTTTCTTTAATTGAAGTTAATTT
ATTTAATTTAAGGGAATTATGGTTTTGCAGAGTTTAGAACACCTGACGAAGCAACAAAAG
CTCTTAATGCATTAGTTAATGTAACATTATTGGGATAACCATTAAAGGTAGGGAGACCTG
CACAATATACAAAATCTTCAACTGAAGTTTCATCAAGTGGAGGTGATTAAATTTTACATT
TTCTATCTAGAATATTAATTCAATTTTTTATATTTTAGCCAATTCTGGTGCAACTGGTTT
TTCTTCAAGTGGTCGTTTTGATATTCTTAGTTTGTTAGATCCTAATGGTAAAAACAATAA
AAAATTTATTTTTATTTATGCTTAAGTATTTATTTATTTTTCTTTAGGCTAAAAAAAGGA
CTAAGAAGAAGCTGAAGGTGCATAATAAGCTGCAAATTTAACTTTGATCCCAGGATTAGA
GGCTGCTCCACCTGTAACAAATAAAAATGTAAAATATTAATTAGATTGGAAATTATGATG
GTATTAATTAAAAAAAAAATTAGATGATAAGTTTAAAAGTGTAAATACCAACTAGAATCC
TTGTTTTACACAATATGATTGCAGATGGTGAATTAATTATTGATGAAGAATTCAGATAAA
TAGAAGAAGATGTAAAAGAAGAATGTTCAAAGCATGGTAAAGTAGTAAAAATAACTATTC
CAAGACCTAGCGATTCAAATGAATAAGTAAAAGGCTAAGGCCGTATTTTTGTAGAATATG
AAAATACTGATGCAGCAAGAGATGCAAGAAGAGTAAAAAAAACAATTTATATATTTAATC
TATTTTTCAACTAATATTTTTTTAAAAAAGGATCTAAATGGTAGATTATTTAACAATAGA
ACTGTTCAAGTATAATACTTCAGCGAGCAAAAATATTTAGATGGGGAACTGGATTTTAGA
ATAAGATGA


>TTHERM_00318730(protein)
MYFNLFKLYLLTLSNFLFLQNELLVFLLKKAYRHIVLQDIYYLLFNSNKDISISQSIKYN
QLILKTFLQSKFVELDSQLYINRIDQKQMSSSRERKRSDSRSKKDKKDKKDKKEKKDKKD
KKEHKEHKERRDSREKKSKKESKDRRDRKESRDREEKKDKKDKKDKKKRDKSEDRKRRSN
SYHQKRKRSSTKSSSRGRKRSQPQRGQNFGFAFDSPPKEITQKEEPAQSQEVVNDFSNVI
NNPNFNPKFKELFMKLQNSKLPDLQNSKCDRKLYIGNIPPGLQPVKCQLMINSALKQLKV
NQEPGDSCVSIWISPEGNYGFAEFRTPDEATKALNALVNVTLLGQPLKVGRPAQYTKSST
EVSSSGANSGATGFSSSGRFDILSLLDPNGQKKDQEEAEGAQQAANLTLIPGLEAAPPVT
NKNMISLKVQIPTRILVLHNMIADGELIIDEEFRQIEEDVKEECSKHGKVVKITIPRPSD
SNEQVKGQGRIFVEYENTDAARDARRDLNGRLFNNRTVQVQYFSEQKYLDGELDFRIR