Identifiers and Description

Gene Model Identifier

TTHERM_00333210

Standard Name

RPL4 (Ribosomal Protein of the large subunit)

Aliases

PreTt05965 | 34.m00202 | 3689.m00001

Description

RPL4 60S ribosomal protein L4; ribosomal protein L4/L1 family protein; Large ribosomal subunit protein uL4, eukaryotic and archaeal type

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Molecular Function

Biological Process

  • asymmetric protein localization (IEA) | GO:0008105
  • basement membrane organization (IEA) | GO:0071711
  • cell wall modification involved in fruit ripening (IEA) | GO:0009829
  • coenzyme A metabolic process (IEA) | GO:0015936
  • heme A biosynthetic process (IEA) | GO:0006784
  • heme biosynthetic process (IEA) | GO:0006783
  • immunoglobulin heavy chain V-D-J recombination (IEA) | GO:0071707
  • microtubule depolymerization (IEA) | GO:0007019
  • mitochondrial membrane organization (IEA) | GO:0007006
  • negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902642
  • negative regulation of complement-dependent cytotoxicity (IEA) | GO:1903660
  • negative regulation of epithelial cell-cell adhesion involved in epithelium migration (IEA) | GO:1903682
  • negative regulation of glycoprotein metabolic process (IEA) | GO:1903019
  • negative regulation of macrophage derived foam cell differentiation (IEA) | GO:0010745
  • negative regulation of PERK-mediated unfolded protein response (IEA) | GO:1903898
  • negative regulation of sprouting angiogenesis (IEA) | GO:1903671
  • negative regulation of stomatal opening (IEA) | GO:1902457
  • negative regulation of telomere single strand break repair (IEA) | GO:1903824
  • neutral lipid metabolic process (IEA) | GO:0006638
  • obsolete bent DNA binding (IEA) | GO:0006326
  • obsolete larval behavior (sensu Insecta) (IEA) | GO:0007627
  • obsolete MAPK cascade involved in ascospore formation (IEA) | GO:1903695
  • obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (IEA) | GO:0070055
  • ommochrome biosynthetic process (IEA) | GO:0006727
  • phagocytosis (IEA) | GO:0006909
  • pigment accumulation in response to UV light (IEA) | GO:0043478
  • pigment accumulation in tissues in response to UV light (IEA) | GO:0043479
  • plant-type cell wall modification (IEA) | GO:0009827
  • positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902643
  • positive regulation of B cell mediated immunity (IEA) | GO:0002714
  • positive regulation of macrophage derived foam cell differentiation (IEA) | GO:0010744
  • positive regulation of peroxisome proliferator activated receptor signaling pathway (IEA) | GO:0035360
  • positive regulation of response to water deprivation (IEA) | GO:1902584
  • positive regulation of wound healing, spreading of epidermal cells (IEA) | GO:1903691
  • propan-2-ol biosynthetic process (IEA) | GO:1902640
  • protein localization to old growing cell tip (IEA) | GO:1903858
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (IEA) | GO:1902646
  • regulation of complement-dependent cytotoxicity (IEA) | GO:1903659
  • regulation of cytokinin dehydrogenase activity (IEA) | GO:1903856
  • regulation of glycoprotein metabolic process (IEA) | GO:1903018

Domains

  • ( PF00573 ) Ribosomal protein L4/L1 family
  • ( PF14374 ) 60S ribosomal protein L4 C-terminal domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences 

>TTHERM_00333210(coding)
ATGACTTCTAGACCTCAAATCCACGTCCACGACGCTAAGGAAGCTAACAAGCAAACCGCT
ACCAAGCTCACCCTCCCCGCTGTCTTCACTGCTCCCATCAGAACTGATATTGTCCACAAG
GTTTTCACCGACCTTAACAAGAACAGAAAGCAAGCTTCCGGAGTCAAGATTTCCACCAGA
GGTACTGCTGGTATGGGTCACTCCGCTGAATCTTGGGGTACTGGTAGAGCTGTTGCTCGT
ATTCCCAGAGTTGGTGGTTCTGGTACTCACAGATCCGGTCAAGCCGCCTTCGGTAACCAA
TGTAGAAAGGGTAGAATGTTCGCTCCCTTGAAGACCTACAGAAGAGTCCACAGAAGAGTC
AATGTCAACCAAAAGAGACACGCCGTCGCTGCTGCCCTCGCTGCCTCTGCTTTGGTTCCT
TTAGTTTTCGCTAGAGGTCACAGAATCTCCAACGTTTAGGAACTCCCCTACGTTTTCGAT
GACTCCGTCGAATCTTATGAAAAGACCAAGCAAGCTGTTGCTTTCCTCAAGAGAGTCGGT
GCTTACGATGATGTCCTCAGAGTTGCTGAAACCAAGGCACTCAGAGCTGGTCAAGGTAAA
TTGAGAAACAGAAGATACAAACTCAGAAGAGGTCCCCTCGTCGTCTACGGTAACGAAAAG
TCCACCCTCACCAGAGCTCTTAGAAACATTCCTGGTGTTGATGTTTGCAACGTTAACAGA
CTTAACTTATTATAATTGGCTCCTGGTGGTCACGTTGGTAGATTCATCATCTGGACTGAA
TCTGCTTTCAAGAAGTTAAACGAAATCTTCGGTACTTACTCTACTACTGGTGTCCAAAAG
AGCGGTTACCAATTATAAAGACCCCTCTTGGCCAACGCTGACATCGCTAGAATCATCAAC
TCTAACGAAGTCTAATCCGTTGTTAAGGTTGCTGGTACCACCGAAACCCACGAAAGAAAG
AAAAACCCCTTGACCAACAACAACGCTCTCTTCAAGTTAAACCCCGCTGCTAAGATCGTT
AAGGAACAAGCTAAGAAGGCTGCTGAAGCTTCCAAGGCTAAGAGATAAGCTACCCTCAAG
GCCAACAGAAAGGCTGCCAAGACCCACAAGAAGGGATCTCAAGCTTGGATTGCTGCTTTC
AACAAGGCTAACGAAGAAGCTATTGCTAAGGCTAGATAAGAAGATGCTGATTTCATTGCT
CAAGGTCAAGAAATCAAGGAAGGTGACGAATGA



>TTHERM_00333210(gene)
TTTAAAGAGGGGGAAACATATTGATTTTAAGGCCAAATCAAAATATCTATTAAGAGAAAT
TAATCAAAGGGAAAAACAAATAAAAGTAAAGTAAAAGATAAATTAAAAAGTATTAGAAAA
AAAAAATAAAAGAAATGACTTCTAGACCTCAAATCCACGTCCACGACGCTAAGGAAGCTA
ACAAGCAAACCGCTACCAAGCTCACCCTCCCCGCTGTCTTCACTGCTCCCATCAGAACTG
ATATTGTCCACAAGGTTTTCACCGACCTTAACAAGAACAGAAAGCAAGCTTCCGGAGTCA
AGATTTCCACCAGAGGTACTGCTGGTATGGGTCACTCCGCTGAATCTTGGGGTACTGGTA
GAGCTGTTGCTCGTATTCCCAGAGTTGGTGGTTCTGGTACTCACAGATCCGGTCAAGCCG
CCTTCGGTAACCAATGTAGAAAGGGTAGAATGTTCGCTCCCTTGAAGACCTACAGAAGAG
TCCACAGAAGAGTCAATGTCAACCAAAAGAGACACGCCGTCGCTGCTGCCCTCGCTGCCT
CTGCTTTGGTTCCTTTAGTTTTCGCTAGAGGTCACAGAATCTCCAACGTTTAGGAACTCC
CCTACGTTTTCGATGACTCCGTCGAATCTTATGAAAAGACCAAGCAAGCTGTTGCTTTCC
TCAAGAGAGTCGGTGCTTACGATGATGTCCTCAGAGTTGCTGAAACCAAGGCACTCAGAG
CTGGTCAAGGTAAATTGAGAAACAGAAGATACAAACTCAGAAGAGGTCCCCTCGTCGTCT
ACGGTAACGAAAAGTCCACCCTCACCAGAGCTCTTAGAAACATTCCTGGTGTTGATGTTT
GCAACGTTAACAGACTTAACTTATTATAATTGGCTCCTGGTGGTCACGTTGGTAGATTCA
TCATCTGGACTGAATCTGCTTTCAAGAAGTTAAACGAAATCTTCGGTACTTACTCTACTA
CTGGTGTCCAAAAGAGCGGTTACCAATTATAAAGACCCCTCTTGGCCAACGCTGACATCG
CTAGAATCATCAACTCTAACGAAGTCTAATCCGTTGTTAAGGTTGCTGGTACCACCGAAA
CCCACGAAAGAAAGAAAAACCCCTTGACCAACAACAACGCTCTCTTCAAGTTAAACCCCG
CTGCTAAGATCGTTAAGGAACAAGCTAAGAAGGCTGCTGAAGCTTCCAAGGCTAAGAGAT
AAGCTACCCTCAAGGCCAACAGAAAGGCTGCCAAGACCCACAAGAAGGGATCTCAAGCTT
GGATTGCTGCTTTCAACAAGGCTAACGAAGAAGCTATTGCTAAGGCTAGATAAGAAGATG
CTGATTTCATTGCTCAAGGTCAAGAAATCAAGGAAGGTGACGAATGAACGTGATCTATAA
TCTGAATTTTAAACCTCTTTATCTAATAAACTGCACATAAAACTATAAATATATATATAT
TCACTTAATCATACGCTATTTAATATTGTATTAAATATTTTATGGTAACCTACTTCGTAG
GATATTTAAATTTCC



>TTHERM_00333210(protein)
MTSRPQIHVHDAKEANKQTATKLTLPAVFTAPIRTDIVHKVFTDLNKNRKQASGVKISTR
GTAGMGHSAESWGTGRAVARIPRVGGSGTHRSGQAAFGNQCRKGRMFAPLKTYRRVHRRV
NVNQKRHAVAAALAASALVPLVFARGHRISNVQELPYVFDDSVESYEKTKQAVAFLKRVG
AYDDVLRVAETKALRAGQGKLRNRRYKLRRGPLVVYGNEKSTLTRALRNIPGVDVCNVNR
LNLLQLAPGGHVGRFIIWTESAFKKLNEIFGTYSTTGVQKSGYQLQRPLLANADIARIIN
SNEVQSVVKVAGTTETHERKKNPLTNNNALFKLNPAAKIVKEQAKKAAEASKAKRQATLK
ANRKAAKTHKKGSQAWIAAFNKANEEAIAKARQEDADFIAQGQEIKEGDE