Identifiers and Description

Gene Model Identifier

TTHERM_00333210

Standard Name

RPL4 (Ribosomal Protein of the large subunit)

Aliases

PreTt05965 | 34.m00202 | 3689.m00001

Description

RPL4 60S ribosomal protein L4; ribosomal protein L4/L1 family protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00573 ) Ribosomal protein L4/L1 family

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16012.1	9.997093137033517e-262
	Description: ribosomal protein L4/L1 family protein (411 aa)
WormBase	WBGene00002299	9.997093137033517e-262
	Description: locus:let-23 status:Confirmed UniProt:B5BM28 protein_id:CAR31510.1
Oxytricha	Contig3676.0.g1	6.999872280442742e-128
	Description: Ribosomal protein L4/L1 family
DictyBase	DDB_G0277803	3.999369102302453e-125
	Description: rpl4 on chromosome: 2 position 8431684 to 8432899
WormBase	WBGene00004415	4.998015698166016e-118
	Description: locus:rpl-4 60S ribosomal protein L4 status:Confirmed UniProt:O02056 protein_id:CCD61249.1
SGD	YDR012W	9.999453238338778e-112
	Description: RPL4B Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins
Stentor Coeruleus	SteCoe_25345	2.0842828425817514e-52
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00333210(coding)
ATGACTTCTAGACCTCAAATCCACGTCCACGACGCTAAGGAAGCTAACAAGCAAACCGCT
ACCAAGCTCACCCTCCCCGCTGTCTTCACTGCTCCCATCAGAACTGATATTGTCCACAAG
GTTTTCACCGACCTTAACAAGAACAGAAAGCAAGCTTCCGGAGTCAAGATTTCCACCAGA
GGTACTGCTGGTATGGGTCACTCCGCTGAATCTTGGGGTACTGGTAGAGCTGTTGCTCGT
ATTCCCAGAGTTGGTGGTTCTGGTACTCACAGATCCGGTCAAGCCGCCTTCGGTAACCAA
TGTAGAAAGGGTAGAATGTTCGCTCCCTTGAAGACCTACAGAAGAGTCCACAGAAGAGTC
AATGTCAACCAAAAGAGACACGCCGTCGCTGCTGCCCTCGCTGCCTCTGCTTTGGTTCCT
TTAGTTTTCGCTAGAGGTCACAGAATCTCCAACGTTTAGGAACTCCCCTACGTTTTCGAT
GACTCCGTCGAATCTTATGAAAAGACCAAGCAAGCTGTTGCTTTCCTCAAGAGAGTCGGT
GCTTACGATGATGTCCTCAGAGTTGCTGAAACCAAGGCACTCAGAGCTGGTCAAGGTAAA
TTGAGAAACAGAAGATACAAACTCAGAAGAGGTCCCCTCGTCGTCTACGGTAACGAAAAG
TCCACCCTCACCAGAGCTCTTAGAAACATTCCTGGTGTTGATGTTTGCAACGTTAACAGA
CTTAACTTATTATAATTGGCTCCTGGTGGTCACGTTGGTAGATTCATCATCTGGACTGAA
TCTGCTTTCAAGAAGTTAAACGAAATCTTCGGTACTTACTCTACTACTGGTGTCCAAAAG
AGCGGTTACCAATTATAAAGACCCCTCTTGGCCAACGCTGACATCGCTAGAATCATCAAC
TCTAACGAAGTCTAATCCGTTGTTAAGGTTGCTGGTACCACCGAAACCCACGAAAGAAAG
AAAAACCCCTTGACCAACAACAACGCTCTCTTCAAGTTAAACCCCGCTGCTAAGATCGTT
AAGGAACAAGCTAAGAAGGCTGCTGAAGCTTCCAAGGCTAAGAGATAAGCTACCCTCAAG
GCCAACAGAAAGGCTGCCAAGACCCACAAGAAGGGATCTCAAGCTTGGATTGCTGCTTTC
AACAAGGCTAACGAAGAAGCTATTGCTAAGGCTAGATAAGAAGATGCTGATTTCATTGCT
CAAGGTCAAGAAATCAAGGAAGGTGACGAATGA

>TTHERM_00333210(gene)
ATGACTTCTAGACCTCAAATCCACGTCCACGACGCTAAGGAAGCTAACAAGCAAACCGCT
ACCAAGCTCACCCTCCCCGCTGTCTTCACTGCTCCCATCAGAACTGATATTGTCCACAAG
GTTTTCACCGACCTTAACAAGAACAGAAAGCAAGCTTCCGGAGTCAAGATTTCCACCAGA
GGTACTGCTGGTAAGACATTCATAAAATTATTTATTATTCATCCTTTAAAAGGAATCAAA
TATTTATAAATATCTTGGCATGTTCGATGTTAATATTAAGAGTATAAGTGAATTTGTTTA
TTGCTTTGAGAAATTATTTTTAGCATCATAATATTACAAAAATCAAGTCGGTTGAAAAGA
TAAATTAAGTAGCGCATCTGTATAATAGAGAAGTTTTCATAAAATATCAGCAAGACAAAA
ATAAATTATGATTGATAGTAACTACTAATTCTAAAGGGTTGCAAGTAGAAAAGATAGCTA
TACTTAATCAATTTTAGTTAATGTGTGATAAGCAGGGCATTTGGTTTAGATTTCAAAATA
AAGTGGGCTGATAGTTTGTTTATATAACAAATAAATTTGGTAAAGAAAGAGAATCTCATA
AAAAATAAATTTAGGTTATTATCATATATTTGTCCTATTCCCTTTAAGCAAAGTATTAAT
AGTAAATTGCAAAATGCTATGTAAATATCTAAGGGTGAAAACTAAATAAATAAATAAATA
TCTATTTGAAAGATGCTTTAAAGTATTGTAGCATGAAATTAATTGCCCAGAAATGTATTC
AAATTAAGGTTTTGTTAAACGATTTGAATCGCTTCTACTGAATTATCATATTAAAGAGAA
TATATAGTGCTTGAAAAATAAAAATAAACTCATAAGCAATATCAAATTTAAATATATTCA
CTTAAAATTTAACCAGACGTGCTAAGCATAATTATAAATCAAAATATTATTATTTACATT
TTGAATTTATTTTAAAGATTCATTTATTTTTAATTAGGTATGGGTCACTCCGCTGAATCT
TGGGGTACTGGTAGAGCTGTTGCTCGTATTCCCAGAGTTGGTGGTTCTGGTACTCACAGA
TCCGGTCAAGCCGCCTTCGGTAACCAATGTAGAAAGGGTAGAATGTTCGCTCCCTTGAAG
ACCTACAGAAGAGTCCACAGAAGAGTCAATGTCAACCAAAAGAGACACGCCGTCGCTGCT
GCCCTCGCTGCCTCTGCTTTGGTTCCTTTAGTTTTCGCTAGAGGTCACAGAATCTCCAAC
GTTTAGGAACTCCCCTACGTTTTCGATGACTCCGTCGAATCTTATGAAAAGACCAAGCAA
GCTGTTGCTTTCCTCAAGAGAGTCGGTGCTTACGATGATGTCCTCAGAGTTGCTGAAACC
AAGGCACTCAGAGCTGGTCAAGGTAAATTGAGAAACAGAAGATACAAACTCAGAAGAGGT
CCCCTCGTCGTCTACGGTAACGAAAAGTCCACCCTCACCAGAGCTCTTAGAAACATTCCT
GGTAATTCTTTGAACATTTAAAAAGAAAATAAAATTCACATTGCCACTAGTGCAATAAAT
AAATAATTTATTTAGTCTAAATTTGGTTTTAAAATTCAACAAGTTCTATAAATAGTTAAA
TCAAATTTAATTTAATTGAGCTATTGAAAGAATATTTATTTAAATATTAGCAAATAAATT
AAATTTAGACTAAATTTGATAAATTTGTCCTCATTTTTTGAATGAAAAATTAAAATTTTA
ATTAAAATATTGAATAGGTGTTGATGTTTGCAACGTTAACAGACTTAACTTATTATAATT
GGCTCCTGGTGGTCACGTTGGTAGATTCATCATCTGGACTGAATCTGCTTTCAAGAAGTT
AAACGAAATCTTCGGTACTTACTCTACTACTGGTGTCCAAAAGAGCGGTTACCAATTATA
AAGACCCCTCTTGGCCAACGCTGACATCGCTAGAATCATCAACTCTAACGAAGTCTAATC
CGTTGTTAAGGTTGCTGGTACCACCGAAACCCACGAAAGAAAGAAAAACCCCTTGACCAA
CAACAACGCTCTCTTCAAGTTAAACCCCGCTGCTAAGATCGTTAAGGAACAAGCTAAGAA
GGCTGCTGAAGCTTCCAAGGCTAAGAGATAAGCTACCCTCAAGGCCAACAGAAAGGCTGC
CAAGACCCACAAGAAGGGATCTCAAGCTTGGATTGCTGCTTTCAACAAGGCTAACGAAGA
AGCTATTGCTAAGGCTAGATAAGAAGATGCTGATTTCATTGCTCAAGGTCAAGAAATCAA
GGAAGGTGACGAATGA

>TTHERM_00333210(protein)
MTSRPQIHVHDAKEANKQTATKLTLPAVFTAPIRTDIVHKVFTDLNKNRKQASGVKISTR
GTAGMGHSAESWGTGRAVARIPRVGGSGTHRSGQAAFGNQCRKGRMFAPLKTYRRVHRRV
NVNQKRHAVAAALAASALVPLVFARGHRISNVQELPYVFDDSVESYEKTKQAVAFLKRVG
AYDDVLRVAETKALRAGQGKLRNRRYKLRRGPLVVYGNEKSTLTRALRNIPGVDVCNVNR
LNLLQLAPGGHVGRFIIWTESAFKKLNEIFGTYSTTGVQKSGYQLQRPLLANADIARIIN
SNEVQSVVKVAGTTETHERKKNPLTNNNALFKLNPAAKIVKEQAKKAAEASKAKRQATLK
ANRKAAKTHKKGSQAWIAAFNKANEEAIAKARQEDADFIAQGQEIKEGDE