Identifiers and Description

Gene Model Identifier

TTHERM_00348880

Standard Name

RRM11 (RNA Recognition Motif-containing protein 11)

Aliases

PreTt05300 | 36.m00264 | 3703.m00126

Description

RRM11 RNA recognition motif protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif
• ( TIGR01622 ) splicing factor, CC1-like family
• ( TIGR01628 ) polyadenylate binding protein, human types
• ( TIGR01642 ) U2 snRNP auxilliary factor, large
• ( TIGR01659 ) sex-lethal family splicing factor
• ( TIGR01661 ) ELAV/HuD family splicing factor

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_09792.1	9.997093137033517e-262
	Description: hypothetical protein (479 aa)
WormBase	WBGene00003902	1.000116773704384e-19
	Description: locus:pab-1 status:Confirmed UniProt:Q9U302 protein_id:CAA21572.1
Oxytricha	Contig18677.0.g10	2.000769134519826e-18
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
DictyBase	DDB_G0291486	5.998633383648922e-18
	Description: DDB_G0291486 on chromosome: 6 position 413873 to 415521
SGD	YER165W	0.000000000000008002679274403579
	Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
Stentor Coeruleus	SteCoe_14690	0.00000000003775134544279098
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00348880(coding)
ATGAATATAAATTGTCAGTAGTAAGAAGAAAGTTCTTTCGAAATAGATTATAGATTTTAG
AATGATTTGATTTCATTTGAAAATCTCATATCGAATTTCAACTAAAGTAAGCAAACTAAA
GACAACATTGAAGTAGATTTTGATAGCTTGCAAGAGCAGACTAATTAGCTTATGCTACTT
CTACAAAAATCAGCTAATAACAATAAATCAATTCAAAATAAATAAAATGATGAGTTAACT
AATTTTGTAATAGATATTTAGATGGTTTTTAATTCAATTCCTATTAAATTATTTATTGGG
CAAGTTCCTAAGGATTGGTAGGAAAGTGATCTTAAGATTTTTTTTGAAAAACATACCAGT
ATCACATAAATTGAAGTAATAAGAGACTAAAAATTTAGACATTAGGGATGCGCTTTTGCT
ACTTTTTCCTCAATGTCTGAAGCAGAAAAAGTTATTGAATTCTACAAAAATAAACATTTT
CCAAACAGTAAGTAGGAAATTATTATGAAGTGGGCTTCTGGAGAAGAAGAAAGACTCGGA
GTCAGCGAGAATTCAAGTCATAAGCTAATTATAAAAAATCTTCCTGCTTTAATATCAGAT
GCAAGTATTTCTAATATATTTGATAATTTTGGTAGAATCTAATAATTAAAAGTCATACGA
GATAAAAAAACAAGTGAATGCAAAGGTCATGCGTTTATTAAATATTATGAGAAAGAGAGT
GCCCATTTAGCTGTCTAGAACTTGAACAAATAAAATATTTACCTAATTTAAAATAAAAAA
TTGAAAGTTTCTTTTATAGAAAAGAGTTATTAAAAAAAGCAAAAGTAAATTCTAAAATAT
ATGAAACAAAATACAAATCAAATAACATAAAATGGCCCTCTGCCTTCTACAATACCTTTT
GAGAAGTATTATTATGAATATTTTAATTAAGGGGAATCTAATCCTATATTTTACCATCCA
TTTACAGATACTTCTTCTACTGAAACTCCTCCTTACTCCTCATTAATCTGGCACGAAGAT
GGTTCTTGCACAATTACACCTAAACTTTTTCCCTGCCATATAGATTTTACAATGTAAAAT
AAAAGAAAAGATGGTATTAAAAAATATACAAATCAAAAATATGTTGTTTAAGGTCCTTCA
CACTCTAATATTTTTGTCTTTCATCTACCTAAATAATATAATGAAAAAAACTTATTTGAG
CTATTTTCAGGTTATGGAAATATCATTTCAATAACTATTTGTAGAAAATAAAATGGTGAA
AGCCGAGGTTATGGATTTGTTAGTTTTAACTAGCCTTATGAGGCAGCTCATGCAATAAAA
GAATTAAATGGTTTAAATTTGATGGGAAAAAGAATAAAAGTAGAACTAAAATAAACCCAT
ATTGAAAAAGTAAATAGCAATCAAAAAACACTAAACTATGAATGA

>TTHERM_00348880(gene)
ATGAATATAAATTGTCAGTAGTAAGAAGAAAGTTCTTTCGAAATAGATTATAGATTTTAG
AATGATTTGATTTCATTTGAAAATCTCATATCGAATTTCAACTAAAGTAAGCAAACTAAA
GACAACATTGAAGTAGATTTTGATAGCTTGCAAGAGCAGACTAATTAGCTTATGCTACTT
CTACAAAAATCAGCTAATAACAATAAATCAATTCAAAATAAATAAAATGATGAGTTAACT
AATTTTGTAATAGATATTTAGATGGTTTTTAATTCAATTCCTATTAAATTATTTATTGGG
CAAGTTCCTAAGGATTGGTAGGAAAGTGATCTTAAGATTTTTTTTGAAAAACATACCAGT
ATCACATAAATTGAAGTAATAAGAGACTAAAAATTTAGACATTAGGGATGCGCTTTTGCT
ACTTTTTCCTCAATGTCTGAAGCAGAAAAAGTTATTGAATTCTACAAAAATAAACATTTT
CCAAACAGTAAGTAGGAAATTATTATGAAGTGGGCTTCTGGAGAAGAAGAAAGACTCGGA
GTCAGCGAGAATTCAAGTCATAAGCTAATTATAAAAAATCTTCCTGCTTTAATATCAGAT
GCAAGTATTTCTAATATATTTGATAATTTTGGTAGAATCTAATAATTAAAAGTCATACGA
GATAAAAAAACAAGTGAATGCAAAGGTCATGCGTTTATTAAATATTATGAGAAAGAGAGT
GCCCATTTAGCTGTCTAGAACTTGAACAAATAAAATATTTACCTAATTTAAAATAAAAAA
TTGAAAGTTTCTTTTATAGAAAAGAGTTATTAAAAAAAGCAAAAGTAAATTCTAAAATAT
ATGAAACAAAATACAAATCAAATAACATAAAATGGCCCTCTGCCTTCTACAATACCTTTT
GAGAAGTATTATTATGAATATTTTAATTAAGGGGAATCTAATCCTATATTTTACCATCCA
TTTACAGATACTTCTTCTACTGAAACTCCTCCTTACTCCTCATTAATCTGGCACGAAGAT
GGTTCTTGCACAATTACACCTAAACTTTTTCCCTGCCATATAGATTTTACAATGTAAAAT
AAAAGAAAAGATGGTATTAAAAAATATACAAATCAAAAATATGTTGTTTAAGGTCCTTCA
CACTCTAATATTTTTGTCTTTCATCTACCTAAATAATATAATGAAAAAAACTTATTTGAG
CTATTTTCAGGTTATGGAAATATCATTTCAATAACTATTTGTAGAAAATAAAATGGTGAA
AGCCGAGGTTATGGATTTGTTAGTTTTAACTAGCCTTATGAGGCAGCTCATGCAATAAAA
GAATTAAATGGTTTAAATTTGATGGGAAAAAGAATAAAAGTAGAACTAAAATAAACCCAT
ATTGAAAAAGTAAATAGCAATCAAAAAACACTAAACTATGAATGA

>TTHERM_00348880(protein)
MNINCQQQEESSFEIDYRFQNDLISFENLISNFNQSKQTKDNIEVDFDSLQEQTNQLMLL
LQKSANNNKSIQNKQNDELTNFVIDIQMVFNSIPIKLFIGQVPKDWQESDLKIFFEKHTS
ITQIEVIRDQKFRHQGCAFATFSSMSEAEKVIEFYKNKHFPNSKQEIIMKWASGEEERLG
VSENSSHKLIIKNLPALISDASISNIFDNFGRIQQLKVIRDKKTSECKGHAFIKYYEKES
AHLAVQNLNKQNIYLIQNKKLKVSFIEKSYQKKQKQILKYMKQNTNQITQNGPLPSTIPF
EKYYYEYFNQGESNPIFYHPFTDTSSTETPPYSSLIWHEDGSCTITPKLFPCHIDFTMQN
KRKDGIKKYTNQKYVVQGPSHSNIFVFHLPKQYNEKNLFELFSGYGNIISITICRKQNGE
SRGYGFVSFNQPYEAAHAIKELNGLNLMGKRIKVELKQTHIEKVNSNQKTLNYE