Identifiers and Description

Gene Model Identifier

TTHERM_00354990

Standard Name

CSL4 (exosome complex component CSL4)

Aliases

PreTt27485 | 37.m00202 | 3836.m02288

Description

CSL4 exosome complex component CSL4

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00575 ) S1 RNA binding domain
• ( PF03017 ) TNP1/EN/SPM transposase

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_02327.1	9.997962730346853e-122
	Description: hypothetical protein (194 aa)
DictyBase	DDB_G0285377	8.00089003463867e-30
	Description: DDB_G0285377 on chromosome: 4 position 3204171 to 3204931
Oxytricha	Contig21513.0.g33	7.002638123733849e-21
	Description: Exosome component EXOSC1/CSL4
SGD	YNL232W	5.999654353873483e-20
	Description: CSL4 Exosome non-catalytic core component; involved in 3-5 RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; has similarity to human hCsl4p (EXOSC1)
WormBase	WBGene00012966	0.000000000000008995967261938872
	Description: locus:exos-1 status:Confirmed UniProt:Q9XXD2 protein_id:CAA19529.1
Stentor Coeruleus	SteCoe_33868	0.0000000000018795288165390832
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00354990(coding)
ATGAACGTTTATCTACCTGGTTAAAGTTTAAATTTACCTCAAGGGAATGTTAGATATTCA
GCAGGATAAGGATGCTATGAATTGAATGGCAAAATATTTGCTTCTATTTGCGGAAAATGC
TAAATTGATAAAGACAATATAGTAAGTATAGTTCCTTTAGGCAACAAAGTAGCAAATTTA
CAAGTTGGCTCAATAGTGACAGCTAAGGTGTTAAGAATTAGAGACAATAAAGTTGAAGTC
AAAATAATGATGGTAGAAGATGCTGTGATTAACTATAATTTATAAGGAATAATTAGAAAA
TAAGATGTTAGATAAACTAATTTAGATATTTTAAAAATGGAGGAATAATTTATTCCAGGA
GATATCATTAAAGCTAGATTTATATCATATGGCGATTCATAAAAATTATATTTGTCTGTG
ACCGAAGATGAATTAGGAGTAGTTTTTGCTAAGCATACTGAATCTAAATAGCTAATGATT
CCTTTCAGTTGGGAAGAAATGATTTGTGTATAAACTGGATAAAAAGAAAAAAGAAAAGTA
GCTAAACCAAATATATCTTTATTCTCTGCTTAAATGTAATGA

>TTHERM_00354990(gene)
ATGAACGTTTATCTACCTGGTTAAAGTTTAAGTAATAAATTAGTGATATAAGAATTTTAT
TTAAAGAGGCTATTAAATAAAAAATAGATTTACCTCAAGGGAATGTTAGATATTCAGCAG
GATAAGGATGCTATGAATTGAATGGCAAAATATTTGCTTCTATTTGCGGAAAATGCTAAA
TTGATAAAGACAATATAGTAAGTATAGTTCCTTTAGGCAACAAAGTAGCAAATTTACAAG
TTGGCTCAATAGTGACAGCTAAGGTAAATCTTTAAATTGAAAGTATTATGAAAATATAAG
TTATTTTGCATACTTATTAGGTGTTAAGAATTAGAGACAATAAAGTTGAAGTCAAAATAA
TGATGGTAGAAGATGCTGTGATTAACTATAATTTATAAGGAATAATTAGAAAATAAGATG
TTAGATAAACTAATTTAGATATTTTAAAAATGGAGGAATAATTTATTCCAGGAGATATCA
TTAAAGCTAGATTTGTAATTATTTAAATTAAATAATTTGAACCTCATTTTTCTAAATTAA
TTAAAGATATCATATGGCGATTCATAAAAATTATATTTGTCTGTGACCGAAGATGAATTA
GGAGTAGTTTTTGCTAAGCATACTGAATCTAGTAATAAAAGAATTCAAATATTTTAATTA
ATTTTTATTTAAATTTAATAGAATAGCTAATGATTCCTTTCAGTTGGGAAGAAATGATTT
GTGTATAAACTGGATAAAAAGAAAAAAGAAAAGTAGCTAAACCAAATATATCTTTATTCT
CTGCTTAAATGTAATGA

>TTHERM_00354990(protein)
MNVYLPGQSLNLPQGNVRYSAGQGCYELNGKIFASICGKCQIDKDNIVSIVPLGNKVANL
QVGSIVTAKVLRIRDNKVEVKIMMVEDAVINYNLQGIIRKQDVRQTNLDILKMEEQFIPG
DIIKARFISYGDSQKLYLSVTEDELGVVFAKHTESKQLMIPFSWEEMICVQTGQKEKRKV
AKPNISLFSAQMQ