Identifiers and Description

Gene Model Identifier

TTHERM_00354990

Standard Name

CSL4 (exosome complex component CSL4)

Aliases

PreTt27485 | 37.m00202 | 3836.m02288

Description

CSL4 exosome complex component CSL4

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00575 ) S1 RNA binding domain
  • ( PF03017 ) TNP1/EN/SPM transposase

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_02327.1 9.997962730346853e-122
Description: hypothetical protein (194 aa)
DictyBase DDB_G0285377 8.00089003463867e-30
Description: DDB_G0285377 on chromosome: 4 position 3204171 to 3204931
Oxytricha Contig21513.0.g33 7.002638123733849e-21
Description: Exosome component EXOSC1/CSL4
SGD YNL232W 5.999654353873483e-20
Description: CSL4 Exosome non-catalytic core component; involved in 3-5 RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; has similarity to human hCsl4p (EXOSC1)
WormBase WBGene00012966 0.000000000000008995967261938872
Description: locus:exos-1 status:Confirmed UniProt:Q9XXD2 protein_id:CAA19529.1
Stentor Coeruleus SteCoe_33868 0.0000000000018795288165390832
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00354990(coding)
ATGAACGTTTATCTACCTGGTTAAAGTTTAAATTTACCTCAAGGGAATGTTAGATATTCA
GCAGGATAAGGATGCTATGAATTGAATGGCAAAATATTTGCTTCTATTTGCGGAAAATGC
TAAATTGATAAAGACAATATAGTAAGTATAGTTCCTTTAGGCAACAAAGTAGCAAATTTA
CAAGTTGGCTCAATAGTGACAGCTAAGGTGTTAAGAATTAGAGACAATAAAGTTGAAGTC
AAAATAATGATGGTAGAAGATGCTGTGATTAACTATAATTTATAAGGAATAATTAGAAAA
TAAGATGTTAGATAAACTAATTTAGATATTTTAAAAATGGAGGAATAATTTATTCCAGGA
GATATCATTAAAGCTAGATTTATATCATATGGCGATTCATAAAAATTATATTTGTCTGTG
ACCGAAGATGAATTAGGAGTAGTTTTTGCTAAGCATACTGAATCTAAATAGCTAATGATT
CCTTTCAGTTGGGAAGAAATGATTTGTGTATAAACTGGATAAAAAGAAAAAAGAAAAGTA
GCTAAACCAAATATATCTTTATTCTCTGCTTAAATGTAATGA


>TTHERM_00354990(gene)
ATGAACGTTTATCTACCTGGTTAAAGTTTAAGTAATAAATTAGTGATATAAGAATTTTAT
TTAAAGAGGCTATTAAATAAAAAATAGATTTACCTCAAGGGAATGTTAGATATTCAGCAG
GATAAGGATGCTATGAATTGAATGGCAAAATATTTGCTTCTATTTGCGGAAAATGCTAAA
TTGATAAAGACAATATAGTAAGTATAGTTCCTTTAGGCAACAAAGTAGCAAATTTACAAG
TTGGCTCAATAGTGACAGCTAAGGTAAATCTTTAAATTGAAAGTATTATGAAAATATAAG
TTATTTTGCATACTTATTAGGTGTTAAGAATTAGAGACAATAAAGTTGAAGTCAAAATAA
TGATGGTAGAAGATGCTGTGATTAACTATAATTTATAAGGAATAATTAGAAAATAAGATG
TTAGATAAACTAATTTAGATATTTTAAAAATGGAGGAATAATTTATTCCAGGAGATATCA
TTAAAGCTAGATTTGTAATTATTTAAATTAAATAATTTGAACCTCATTTTTCTAAATTAA
TTAAAGATATCATATGGCGATTCATAAAAATTATATTTGTCTGTGACCGAAGATGAATTA
GGAGTAGTTTTTGCTAAGCATACTGAATCTAGTAATAAAAGAATTCAAATATTTTAATTA
ATTTTTATTTAAATTTAATAGAATAGCTAATGATTCCTTTCAGTTGGGAAGAAATGATTT
GTGTATAAACTGGATAAAAAGAAAAAAGAAAAGTAGCTAAACCAAATATATCTTTATTCT
CTGCTTAAATGTAATGA


>TTHERM_00354990(protein)
MNVYLPGQSLNLPQGNVRYSAGQGCYELNGKIFASICGKCQIDKDNIVSIVPLGNKVANL
QVGSIVTAKVLRIRDNKVEVKIMMVEDAVINYNLQGIIRKQDVRQTNLDILKMEEQFIPG
DIIKARFISYGDSQKLYLSVTEDELGVVFAKHTESKQLMIPFSWEEMICVQTGQKEKRKV
AKPNISLFSAQMQ