Identifiers and Description

Gene Model Identifier

TTHERM_00384800

Standard Name

NOPP52 (NucleOlar PhosphoProtein 52 )

Aliases

PreTt24772 | 41.m00179

Description

Nopp52 RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP protein; Nucleolar phosphoprotein; domain structure similar to vertebrate nucleolin and yeast NSR1; localized to macronuclear nucleoli where it is closely associated with rDNA; in vitro substrate for casein kinase II; hypothetical protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:11381093: Savino TM, Gébrane-Younès J, De Mey J, Sibarita JB, Hernandez-Verdun D (2001) Nucleolar assembly of the rRNA processing machinery in living cells. The Journal of cell biology 153(5):1097-110
  2. Ref:9017598: McGrath KE, Smothers JF, Dadd CA, Madireddi MT, Gorovsky MA, Allis CD (1997) An abundant nucleolar phosphoprotein is associated with ribosomal DNA in Tetrahymena macronuclei. Molecular biology of the cell 8(1):97-108
  3. Ref:9109258: Smothers JF, Madireddi MT, Warner FD, Allis CD (1997) Programmed DNA degradation and nucleolar biogenesis occur in distinct organelles during macronuclear development in Tetrahymena. The Journal of eukaryotic microbiology 44(2):79-88

Sequences 

>TTHERM_00384800(coding)
ATGTCCAAATAAGTTAAGAAGGGTCAAGTTGAAAAGAAGATTAAGGCTGAAGAAGAAAAG
AAGAAGGTTGTCTAACAATCCTCCGATGATAGTGACGATTCTTCCAGCGAAGATGAAAAG
CCTGTTGTCAATAACAAGAAGAACCAAAAGGTTTAAGAAAAGGCTGCTGAAAAGGTTACC
AAGGCTAAGAAGCAAGTTTCTGAATCTTCTGATGACAGTGAATCTGAAGAAGAAAAGCCT
GCCCCCAAGAAGGCTGTCGCTGCTAAGACTGCTCCTGTTGCCAAGAAGGCTGTTGCCAAG
AAGGAATCCTCTGATTCTGATGACAGTGAATCTGAAGAAGAAAAGCCTGCCCCCAAGAAG
GCTGTCGCTGCTAAGACTGCTCCTGTTGCCAAGAAGGCTGTTGCCAAGAAGGAATCCTCT
GATTCTGATGACAGTGAATCTGAAGAAGAAAAGCCTGCCCCCAAGAAGGCTGTCGCTGCT
AAGACTGCTCCTGCTGCCAAGAAGGCTGTTGCCAAGAAGGAATCCTCTGATTCTGATGAC
AGTGAATCTGAAGAACAAAAGCCTGCCCCCAAGAAGGCTGCCGTTAAACCCGCTGCCAAG
AAGTAAGAATCTGAAGATGAAGACAGTGATGAATCAGAAGAATAAAAGCCTGCTACCAAG
AAGGCTGAAAAGATGTAAGTCGAAGAAGAATCTTCTGAAGAATAAAAGCCTATTAAATAA
GACCAACCTATCCAAAAGGCCTAAAACGGTAATGCCAACGGTAAATAAGGTGGTGACAAG
TTCTCTAATGAAGTTATCGTTAAGGGTTTGAGCTTTGATGCTGATGAAAACGATATTGGT
AACTTCTTAGACGAAAACTGCGGTTCCGTTGCTAGAGTTAACCTCTTAAAGAACGAATAA
GGACGTTCTAAGGGTATTGCCTTCGTCAGCTTTGAAACTGAAGAAGGTTGCAACAAGGCT
GTTGAAATGAGCAACTCTGAATTCATGGGTAGATATCTTATTATTGAAAAGACCAAGCCC
AAGACTGAAAGACCTGCTCACTTACCTGTTGATGAAGACTCCAAGACTATCTTTGTTGGT
AACCTCTCTTTCAGAACCGACAAGGAAACTCTTAAGAAGTTCTTCGCCTCTTGCGGTAAG
GTTGCTGATGCTCGTATCGCTGAAGCTGATGGAAAGAGCAGAGGTTTCGGTCACGTTGAA
TTCGAAGAAAGATCCGGTGTTGAAAATGCTTTAAAGAAGGTTGGTGAATAAATCGACGGA
AGACCCATCAAGGTTGATGTCGCTGCTTCCAGAGGTAAACGTGAAGGTTTCAACAGATCC
TAAGGAAACTTCAATAACAACAGAGGTGGTCCCCGTGGTGGTAACAACTCTTTTGCTAAC
GAAAGAAAGGGTGCCATTACTTAATTCTAAGGAAAAATCCAATCTCTCTGA



>TTHERM_00384800(gene)
TATCTGGGGAGATACTAATTAATAAAAATATATTAACTAATTAAATATAATACAAAGAAT
TAAAAATTTATAAAAAAAAATACACATAATAAATAATCATATAGAATAAAATGTCCAAAT
AAGTTAAGAAGGGTCAAGTTGAAAAGAAGATTAAGGCTGAAGAAGAAAAGAAGAAGGTTG
TCTAACAATCCTCCGATGATAGTGACGATTCTTCCAGCGAAGATGAAAAGCCTGTTGTCA
ATAACAAGAAGAACCAAAAGGTTTAAGAAAAGGCTGCTGAAAAGGTTACCAAGGCTAAGA
AGCAAGTTTCTGAATCTTCTGATGACAGTGAATCTGAAGAAGAAAAGCCTGCCCCCAAGA
AGGCTGTCGCTGCTAAGACTGCTCCTGTTGCCAAGAAGGCTGTTGCCAAGAAGGAATCCT
CTGATTCTGATGACAGTGAATCTGAAGAAGAAAAGCCTGCCCCCAAGAAGGCTGTCGCTG
CTAAGACTGCTCCTGTTGCCAAGAAGGCTGTTGCCAAGAAGGAATCCTCTGATTCTGATG
ACAGTGAATCTGAAGAAGAAAAGCCTGCCCCCAAGAAGGCTGTCGCTGCTAAGACTGCTC
CTGCTGCCAAGAAGGCTGTTGCCAAGAAGGAATCCTCTGATTCTGATGACAGTGAATCTG
AAGAACAAAAGCCTGCCCCCAAGAAGGCTGCCGTTAAACCCGCTGCCAAGAAGTAAGAAT
CTGAAGATGAAGACAGTGATGAATCAGAAGAATAAAAGCCTGCTACCAAGAAGGCTGAAA
AGATGTAAGTCGAAGAAGAATCTTCTGAAGAATAAAAGCCTATTAAATAAGACCAACCTA
TCCAAAAGGCCTAAAACGGTAATGCCAACGGTAAATAAGGTGGTGACAAGTTCTCTAATG
AAGTTATCGTTAAGGGTTTGAGCTTTGATGCTGATGAAAACGATATTGGTAACTTCTTAG
ACGAAAACTGCGGTTCCGTTGCTAGAGTTAACCTCTTAAAGAACGAATAAGGACGTTCTA
AGGGTATTGCCTTCGTCAGCTTTGAAACTGAAGAAGGTTGCAACAAGGCTGTTGAAATGA
GCAACTCTGAATTCATGGGTAGATATCTTATTATTGAAAAGACCAAGCCCAAGACTGAAA
GACCTGCTCACTTACCTGTTGATGAAGACTCCAAGACTATCTTTGTTGGTAACCTCTCTT
TCAGAACCGACAAGGAAACTCTTAAGAAGTTCTTCGCCTCTTGCGGTAAGGTTGCTGATG
CTCGTATCGCTGAAGCTGATGGAAAGAGCAGAGGTTTCGGTCACGTTGAATTCGAAGAAA
GATCCGGTGTTGAAAATGCTTTAAAGAAGGTTGGTGAATAAATCGACGGAAGACCCATCA
AGGTTGATGTCGCTGCTTCCAGAGGTAAACGTGAAGGTTTCAACAGATCCTAAGGAAACT
TCAATAACAACAGAGGTGGTCCCCGTGGTGGTAACAACTCTTTTGCTAACGAAAGAAAGG
GTGCCATTACTTAATTCTAAGGAAAAATCCAATCTCTCTGAAAAAATTGAATTAACAATA
ATTTTAAAATATATCTTAAAACTTAATTTAATTTATAAAATCACTAAATAAAATGAAAAA
ACTTAAAAGTTAATAAGTTTTTAAACTACTCTTCATGTTTAAATCTTTTATGTGTATTCA
TATCTTTTATCATCTTTTCTATCCAATTATT



>TTHERM_00384800(protein)
MSKQVKKGQVEKKIKAEEEKKKVVQQSSDDSDDSSSEDEKPVVNNKKNQKVQEKAAEKVT
KAKKQVSESSDDSESEEEKPAPKKAVAAKTAPVAKKAVAKKESSDSDDSESEEEKPAPKK
AVAAKTAPVAKKAVAKKESSDSDDSESEEEKPAPKKAVAAKTAPAAKKAVAKKESSDSDD
SESEEQKPAPKKAAVKPAAKKQESEDEDSDESEEQKPATKKAEKMQVEEESSEEQKPIKQ
DQPIQKAQNGNANGKQGGDKFSNEVIVKGLSFDADENDIGNFLDENCGSVARVNLLKNEQ
GRSKGIAFVSFETEEGCNKAVEMSNSEFMGRYLIIEKTKPKTERPAHLPVDEDSKTIFVG
NLSFRTDKETLKKFFASCGKVADARIAEADGKSRGFGHVEFEERSGVENALKKVGEQIDG
RPIKVDVAASRGKREGFNRSQGNFNNNRGGPRGGNNSFANERKGAITQFQGKIQSL