Identifiers and Description

Gene Model Identifier

TTHERM_00388250

Standard Name

SNF2

Aliases

PreTt24820 | 41.m00227

Description

SNF2 family amine-terminal protein; SNF2 family N-terminal domain containing protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• ATP binding (IEA) | GO:0005524
• DNA binding (IEA) | GO:0003677
• helicase activity (IEA) | GO:0004386
• nucleic acid binding (IEA) | GO:0003676

Domains

• ( PF00176 ) SNF2 family N-terminal domain
• ( PF00249 ) Myb-like DNA-binding domain
• ( PF00270 ) DEAD/DEAH box helicase
• ( PF00271 ) Helicase conserved C-terminal domain
• ( PF01814 ) Hemerythrin HHE cation binding domain
• ( PF04851 ) type III restriction enzyme, res
• ( PF09110 ) HAND
• ( PF09111 ) SLIDE
• ( PF09312 ) SurA N-terminal domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

• ( SD02000 ) Micronucleus: neo3 into SNF2 coding region
• ( SD02026 ) Micronucleus: neo3 into SNF2 coding region Macronucleus: neo3 into SNF2 coding region
• ( SD02027 ) Micronucleus: neo3 into SNF2 coding region
• ( SD02028 ) Micronucleus: neo3 into SNF2 coding region
• ( SD02186 ) Macronucleus: Two HA tags after ATG of SNF2 coding
• ( SD02187 ) Macronucleus: Two HA tags after ATG of SNF2 coding
• ( SD02188 ) Macronucleus: Neo 3 into coding of SNF2 in B2086
• ( SD02189 ) Macronucleus: Neo 3 into coding of SNF2 in B2086

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_6435	0
	Description: None
Tetrahymena borealis	EI9_04448.1	9.997093137033517e-262
	Description: SNF2 family domain-containing protein (1088 aa)
Oxytricha	Contig16241.0.g102	9.997093137033517e-262
	Description: SNF2 family N-terminal domain
WormBase	WBGene00002169	9.998061997456677e-175
	Description: locus:isw-1 Chromatin-remodeling complex ATPase chain isw-1 status:Confirmed UniProt:P41877 protein_id:CCD70709.1
DictyBase	DDB_G0292948	1.9993181170755286e-174
	Description: isw on chromosome: 6 position 2254360 to 2258387
SGD	YOR304W	2.998539800509618e-166
	Description: ISW2 ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00388250(coding)
ATGACTACAAAGAGTAGAAAATCAAAGACTGAAATGGAGGAAATGAATACTCCAGATTAA
GATGAGTTTGAATAAAAGAAGAAAAAAATAGAAGAAATCCTGCAGAAAGCTTTAGATTAT
ACTTAAAAACTTATTCTACATAGAAAAGAAGCTAGTAAATAGGCAATATAGTAGACAGAT
GATTTTAAGTCAAAAAAGAAAGAATCAAAAAGAAAGCATGACAGAGAATAGCAACAATAA
ATTAACAAAGAAGAAAGAATTATGTAAAGAAAATCAACTGGTAGCGAAAATGATTATACT
TACTTGACAGTTTAGCCTAGTAATATTTAATTTGGTGTATTAAAGAATTATTAAATGAAT
GGTTTGAACTGGCTAATATAGTTATATGAATTGAAAATGAATGGAATTTTAGCTGATGAT
ATGGGTTTAGGAAAGACCATTTAAACAATCTCTATGATAGCCTTTTTAAAGCAATTTAAG
CATATTAATGGTAAGCATTTGATTATTGGACCTCTTGCAACATTAAATAATTGGTTAAAT
GAATTTACTAAATGGCTTCCTTGCTGTAAAGCAACTATTTTATATGCTAGAGAAGAAGAA
AGAAATAAAACTCTTTAGGAATATGTGAAATCTGATAAATTTGAAGTTATTATTACTTCT
TATGAAGGCATCAAAAAATCTGCATCTGACCTTTAGAAAATTTAATGGGAATATATGATT
GTGGATGAAGCACATAAATTAAAAAATGACTAGAGTCAGCTCAGTTTACTTTTACGTAAA
TTTAAAACAAAAAATAGATTGCTGCTCACTGGTACACCTCTCCAAAACGACATTCATGAA
TTAATTAGTTTGCTTAATTTTGTCATGCCATAAATTTTTACTGACTGTGATACATTTGAT
GAATTTTTAACCTCTAAGAAAAAGAAGCAATCAGAGTCTGAGTCTGACAGATAGCAAGAA
AATAATGAGGAACCTAACGAAGAATATAATTAAGAAGACAATCTTAGTGAGATAGATAAA
TAAAAAATGGAATTAGTTAAATAGCTTCATCAAATTATTACACCTTTCATGCTTAGAAGA
ACCAAAGAGGATTCACTTAAAGATTTACCTCCCAAAAAAGAAATACATTTGTATGTTGGT
TTAAGTGATTTACAATTAAAAATGTATAGAAACATTCTTCTAAACAAAACAATAGACAGT
GTATACATAGGAGATTAAAAAAGGAATTATAATAATACACTAATGTAGCTCAGAAAAGTA
TGTATACATCCTTATCTTTTTGATGGTGTTGAAGACAGATCTCTCCCAGAATATGGAGAT
CACCTTGTTTACAATAGTGGTAAAATGGTGGTCTTAGACAAATTGCTTAAAAAATTGTAC
CAAGAGAAAGAAAAAGCTCATCAAGTTTTGATTTTTACTTAATTCACAACTTGTTTAGAT
ATTTTAGAAGATTATTTGATAGGAAAAGCTTGGAATTATTGTCGTATAGATGGTAGTACA
GAAGTTAATGAAAGAGAATAAATGATGAATGAGTTTCAAAGAGATGACTCCGATAAATTT
GTTTTCCTTCTTTCAACTAGAGCAGGTGGATTAGGAATTAATTTGACAAAAGCTAACTTT
GTTGTAATATTTGATAGCGATTTTAACCCATAGATAGATTTGTAAGCAATGGACAGAGCA
TATAGAATTGGTTAAACGAGGGAAGTGAAGGTGATCAGACTAATTACTTAATTTACTGTA
GAAGAAAAAATAATAGAGAGGTAAGGTATTAAATTGAAGTTGGATTAACTTATCATACAA
AGTGGAAGATCTTATTCTACAAATTTCAACTTAGACTAGCATAACATAAAGAATATAACC
TAATTTGGTGCAGATGAAATATTCAAAGCAAAAGGATCAACCATCTCAGATGATGATATT
GATATGATTCTGGCAAAAGGTGAAAAAAAGACTGATGAGTAAAATAAAGAAATATAAAAA
TTAGTTGAAGAAAAAATGAAAGGACTGTTTGATTTAGAAGTTAAAAGTATCAAATGCAAA
GAGCTATTTGGTGAAGATCCTCGTTTATAGGACGAAATAGCTATTAAGCAAGCTGCTCTT
TAATCAGAGCTTGAAGAAAAGAAAAAAATTTACGAAGATTAAATTAAAAAAAATAAATTA
ATTAAAGTTAAGATTATTTAATTACCTGAATACCAGCTTTTTGAGAGTAAATCAAGGTTA
GAGCAACTATTATAAAAAGAGGAAGAGTACTTAGCTAGAGGAGGAATAATGTACAAAGTC
GGTTTGTACAGTGAAGAATTTATATAAAATATGGCAAAAAATAATGGTCTTACTGATGAT
GAATTGAAAGAAAAAGAGTAATTAATGTAATAAGGATTTCCTTATTGGGATGCTAATGAT
TACAAAGAATTTTTGAAAGCTTCTTACTTGTACGGAAGAGGTGATTTCGAAAAAATTGCT
GCATTTATGAATAAACCTTTAGATGAAGTCAGAGATTATCACAGAGCTTTCTGGTAAAGA
GGAGAAAAATGTATCAGTAACTTTAATTATATTTAAAAAAAAGTTGAAACTACTGACAAA
AATATTTAAATGGCTAAGGAGTTTACAGATTTTGTTAAAATGAAGATAGATGACAGTGAG
TATATTTAAGAAAATATTACTTTCGATAGTAAAATATACAAAAAATATTCAAGCTAAAAA
CACTCCTTAGATAAAGATTAATTAATAATATATTCATTTTATAAATATGGATATGGTGAA
TGGGAGAAGATTTTATATGATATATAAAATAACGTTTACTTTAGTCTCGATGAAAACTTT
AGAATGATGAGAGAAAGTGATATTAAGGCAAGAGCAAGATCACTATTCAACATTTTGAAA
GCAGAAAATGATAACTAATTGCTAGGAGTGCGTTAAAGATAAATATAACTCAAAAAGATG
TAAGAAGAAAATAAATAGAATAAAAAAGGAGGAAAAAAAGCATAAAAGTAAGATAGTGAA
TCAAGTAACAATTCAATATTAAGTAGAAATAGTGCAGATAAAGATGGCTTTAACAAAGTA
AAACCAACCAATAAAGAAGCTAAAAAAGATTAGAAACGTCAAAAATTAGTTAGCGAGAAA
CCTCAACAAATTATTGAAGATGATATAGAAAACATAGAAAAAAATGTAATAAAAAAAGAA
AACAAAAATAAAAACAAAAAAAATGCTGTGGAAAAACAAAATGTAAATCAAAAAGACCAA
GAAAACTAATAAAAATAAAAAATATTATAAGATAATCAAAATGAAAATAAATTAGAAAAT
TATTTTAGTAAAATTGATAAAATAGTTAAAAAGTGA

>TTHERM_00388250(gene)
ATGACTACAAAGAGTAGAAAATCAAAGACTGAAATGGAGGAAATGGTAACATAATTATTT
TTTATCATTTTATATAGGAAATTAATTAAAAGAATACTCCAGATTAAGATGAGTTTGAAT
AAAAGAAGAAAAAAATAGAAGAAATCCTGCAGAAAGCTTTAGATTATACTTAAAAACTTA
TTCTACATAGAAAAGAAGCTAGGTAATTATTATGTTTTGTGTTTCTATCTTTACTTTTAA
AATATTATTTAGTATAATTTTTAAAATACTTTTTTGGATATTAGTAAATAGGCAATATAG
TAGACAGATGATTTTAAGTCAAAAAAGAAAGAATCAAAAAGAAAGCATGACAGAGAATAG
CAACAATAAATTAACAAAGAAGAAAGAATTATGTAAAGAAAATCAACTGGTAGCGAAAAT
GATTATACTTACTTGACAGTTTAGCCTAGTAATATTTAATTTGGTGTATTAAAGAATTAT
TAAATGAATGGTTTGAACTGGCTAATATAGTTATATGAATTGAAAATGAATGGAATTTTA
GCTGATGATATGGGTTTAGGAAAGACCATTTAAACAATCTCTATGATAGCCTTTTTAAAG
CAATTTAAGCATATTAATGGTAAGCATTTGATTATTGGACCTCTTGCAACATTAAATAAT
TGGTTAAATGAATTTACTAAATGGCTTCCTTGCTGTAAAGCAACTATTTTATATGCTAGA
GAAGTAAAATATCTACTGAATTCTACTTTTTTTTAATAATTGATATTTTAATACCTATCA
AAATAAGGAAGAAAGAAATAAAACTCTTTAGGAATATGTGAAATCTGATAAATTTGAAGT
TATTATTACTTCTTATGAAGGCATCAAAAAATCTGCATCTGACCTTTAGAAGTAAGCATT
TTTTAGAAAATAACTTGATAAATATAATTTTATTCGTTCAATTTTAAAACAGAATTTAAT
GGGAATATATGATTGTGGATGAAGCACATAAATTAAAAAATGACTAGAGTCAGCTCAGTT
TACTTTTACGTAAATTTAAAACAAAAAATAGATTGCTGCTCACTGGTACACCTCTCCAAA
ACGACATTCATGAATTAATTAGTTTGCTTAATTTTGTCATGCCATAAATTTTTACTGACT
GTGATACATTTGATGAATTGTAAAATATTTTGTTCAGTAAAACACAATTTAAAAATTTTT
ATCAAGTTTAACCTCTAAGAAAAAGAAGCAATCAGAGTCTGAGTCTGACAGATAGCAAGA
AAATAATGAGGAACCTAACGAAGAATATAATTAAGAAGACAATCTTAGTGAGATAGATAA
ATAAAAAATGGAATTAGTTAAATAGCTTCATCAAATTATTACACCTTTCATGCTTAGAAG
AACCAAAGAGGATTCACTTAAAGATTTACCTCCCAAAAAAGAAATACATTTGTATGTTGG
TTTAAGTGATTTACAATTAAAAATGTATAGAAACATTCTTCTAAACAAGTAAATAATTCA
TTCTTAAAAAATCAAACATAACAAACATAACAGAAAAAATATTTTTTTTAAAATTCAGAT
AATTTTTTTTTAATTTAAATTAAAAAAAATATTTTATTAATAAATTTAGAACAATAGACA
GTGTATACATAGGAGATTAAAAAAGGAATTATAATAATACACTAATGTAGCTCAGAAAAG
TATGTATACATCCTTATCTTTTTGATGGTGTTGAAGACAGATCTCTCCCAGAATATGGAG
ATCACCTTGTTTACAATAGTGGTAAAATGGTGGTCTTAGACAAATTGCTTAAAAAATTGT
ACCAAGAGAAAGAAAAAGCTCATCAAGTTTTGATTTTTACTTAATTCACAACTTGTTTAG
GTAAAATTTTAGTTAAAATGATAAATGACTTATGTTTATAATAATGAAAAAGATATTTTA
GAAGATTATTTGATAGGAAAAGCTTGGAATTATTGTCGTATAGATGGTAGTACAGAAGTT
AATGAAAGAGAATAAATGATGAATGAGTTTCAAAGAGATGACTCCGATAAATTTGTTTTC
CTTCTTTCAACTAGAGCAGGTGGATTAGGAATTAATTTGACAAAAGCTAACTTTGTTGTA
ATATTTGATAGCGATTTTAACCCATAGATAGATTTGTAAGCAATGGACAGAGCATATAGA
ATTGGTTAAACGAGGGAAGTGAAGGTGATCAGACTAATTACTTAATTTACTGTAGAAGAA
AAAATAATAGAGAGGTAAGGTATTAAATTGAAGTTGGATTAACTTATCATACAAAGTGGA
AGATCTTATTCTACAAATTTCAACTTAGACTAGCATAACATAAAGAATATAACCTAATTT
GGTGCAGATGAAATATTCAAAGCAAAAGGATCAACCATCTCAGATGATGGTAACTATTTT
TAATTTATTTCATGAACTTATTTTAAATAATAAATATTAATAATAATATTTTAGATATTG
ATATGATTCTGGCAAAAGGTGAAAAAAAGACTGATGAGTAAAATAAAGAAATATAAAAAT
TAGTTGAAGAAAAAATGAAAGGACTGTTTGATTTAGAAGTTAAAAGTATCAAATGCAAAG
AGCTATTTGGTGAAGATCCTCGTTTATAGGACGAAATAGCTATTAAGCAAGCTGCTCTTT
AATCAGAGCTTGAAGAAAAGAAAAAAATTTACGAAGATTAAATTAAAAAAAATAAATTAA
TTAAAGTTAAGATTATTTAATTACCTGAATACCAGCTTTTTGAGAGTAAATCAAGGTTAG
AGCAACTATTATAAAAAGTAAATTTTATATTATTTTAGTTTGTTAGTAAATTAATTTGTT
AACAAATTTAGGAGGAAGAGTACTTAGCTAGAGGAGGAATAATGTACAAAGTCGGTTTGT
ACAGTGAAGAATTTATATAAAATATGGCAAAAAATAATGGTCTTACTGATGATGAATTGA
AAGAAAAAGAGTAATTAATGTAATAAGGATTTCCTTATTGGGATGCTAATGATTACAAAG
AATTTTTGAAAGCTTCTTACTTGTACGGAAGAGGTGATTTCGAAAAAATTGCTGCATTTA
TGAATAAACCTTTAGATGAAGTCAGAGATTATCACAGAGCTTTCTGGTAAAGAGGAGAAA
AATGTATCAGTAACTTTAATTATATTTAAAAAAAAGTTGAAACTACTGACAAAAATATTT
AAATGGCTAAGGAGTTTACAGATTTTGTAAATTAAAAATTATTGTGAATGAAAATTAAAT
TCTTATTTTTAAAATAAAGGTTAAAATGAAGATAGATGACAGTGAGTATATTTAAGAAAA
TATTACTTTCGATAGTAAAATATACAAAAAATATTCAAGCTAAAAACACTCCTTAGATAA
AGATTAATTAATAATATATTCATTTTATAAATATGGATATGGTGAATGGGAGAAGATTTT
ATATGATATATAAAATAACGTTTACTTTAGTCTCGATGAAAACTTTAGGTAAGGAATATT
CAATTTATTTAAATAATTATTAACCAATTGCTTCAATGGAATCATTAAAATTAATTTATT
TAAATTAAACTGAACAGAATGATGAGAGAAAGTGATATTAAGGCAAGAGCAAGATCACTA
TTCAACATTTTGAAAGCAGAAAATGATAACTAATTGCTAGGAGTGCGTTAAAGATAAATA
TAACTCAAAAAGATGTAAGAAGAAAATAAATAGAATAAAAAAGGAGGAAAAAAAGCATAA
AAGTAAGATAGTGAATCAAGTAACAATTCAATATTAAGTAGAAATAGTGCAGATAAAGAT
GGCTTTAACAAAGTAAAACCAACCAATAAAGAAGCTAAAAAAGATTAGAAACGTCAAAAA
TTAGTTAGCGAGAAACCTCAACAAATTATTGAAGATGATATAGAAAACATAGAAAAAAAT
GTAATAAAAAAAGAAAACAAAAATAAAAACAAAAAAAATGCTGTGGAAAAACAAAATGTA
AATCAAAAAGACCAAGAAAACTAATAAAAATAAAAAATATTATAAGATAATCAAAATGAA
AATAAATTAGAAAATTATTTTAGTAAAATTGATAAAATAGTTAAAAAGTGA

>TTHERM_00388250(protein)
MTTKSRKSKTEMEEMNTPDQDEFEQKKKKIEEILQKALDYTQKLILHRKEASKQAIQQTD
DFKSKKKESKRKHDREQQQQINKEERIMQRKSTGSENDYTYLTVQPSNIQFGVLKNYQMN
GLNWLIQLYELKMNGILADDMGLGKTIQTISMIAFLKQFKHINGKHLIIGPLATLNNWLN
EFTKWLPCCKATILYAREEERNKTLQEYVKSDKFEVIITSYEGIKKSASDLQKIQWEYMI
VDEAHKLKNDQSQLSLLLRKFKTKNRLLLTGTPLQNDIHELISLLNFVMPQIFTDCDTFD
EFLTSKKKKQSESESDRQQENNEEPNEEYNQEDNLSEIDKQKMELVKQLHQIITPFMLRR
TKEDSLKDLPPKKEIHLYVGLSDLQLKMYRNILLNKTIDSVYIGDQKRNYNNTLMQLRKV
CIHPYLFDGVEDRSLPEYGDHLVYNSGKMVVLDKLLKKLYQEKEKAHQVLIFTQFTTCLD
ILEDYLIGKAWNYCRIDGSTEVNEREQMMNEFQRDDSDKFVFLLSTRAGGLGINLTKANF
VVIFDSDFNPQIDLQAMDRAYRIGQTREVKVIRLITQFTVEEKIIERQGIKLKLDQLIIQ
SGRSYSTNFNLDQHNIKNITQFGADEIFKAKGSTISDDDIDMILAKGEKKTDEQNKEIQK
LVEEKMKGLFDLEVKSIKCKELFGEDPRLQDEIAIKQAALQSELEEKKKIYEDQIKKNKL
IKVKIIQLPEYQLFESKSRLEQLLQKEEEYLARGGIMYKVGLYSEEFIQNMAKNNGLTDD
ELKEKEQLMQQGFPYWDANDYKEFLKASYLYGRGDFEKIAAFMNKPLDEVRDYHRAFWQR
GEKCISNFNYIQKKVETTDKNIQMAKEFTDFVKMKIDDSEYIQENITFDSKIYKKYSSQK
HSLDKDQLIIYSFYKYGYGEWEKILYDIQNNVYFSLDENFRMMRESDIKARARSLFNILK
AENDNQLLGVRQRQIQLKKMQEENKQNKKGGKKAQKQDSESSNNSILSRNSADKDGFNKV
KPTNKEAKKDQKRQKLVSEKPQQIIEDDIENIEKNVIKKENKNKNKKNAVEKQNVNQKDQ
ENQQKQKILQDNQNENKLENYFSKIDKIVKK