Identifiers and Description

Gene Model Identifier

TTHERM_00388440

Standard Name

RPN9 (26S proteasome regulatory subunit N9)

Aliases

PreTt24839 | 41.m00246

Description

RPN9 26S proteasome non-ATPase regulatory subunit

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• proteasome regulatory particle (ISS) | GO:0005838

Domains

• ( PF01399 ) PCI domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_04469.1	9.997093137033517e-262
	Description: PCI domain-containing protein (379 aa)
DictyBase	DDB_G0285105	1.0002758036576784e-62
	Description: psmD13 on chromosome: 4 position 2852779 to 2854360
Oxytricha	Contig746.1.g14	5.999013395827003e-54
	Description: PCI domain
SGD	YDR427W	1.0003292389192957e-45
	Description: RPN9 Non-ATPase regulatory subunit of the 26S proteasome, has similarity to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects
WormBase	WBGene00004465	3.000619078166531e-39
	Description: locus:rpn-9 status:Confirmed UniProt:Q22253 protein_id:CAA88971.1
Tetrahymena borealis	EI9_04073.1	3.000619078166531e-39
	Description: hypothetical protein (352 aa)
Stentor Coeruleus	SteCoe_8781	1.0530617357553812e-20
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences

>TTHERM_00388440(coding)
ATGGATTCAGATCTTTTGTAATAATTATAAGCTCAATTCCCTCAACAATAAACAATTTTA
GAATAGCTAGCCTTGTTATATACTTAAAAATTGTGGCATGAAATTACCTTAAATTTGAAT
ATTTTGTTGCAAGATGAAAATGTCCTTTAGGAGAGAAAAGCCTTATTAAAATTATATGAT
GGCTTTGTCAAAAAATTCATTAATAAGCTTGATTAACTTTTGTTAGCTAGATTCTTGACA
TTCGTAGCTAATGCATTTGACACTAATGAAGAGAAGTTTAATTTCTTAGAATAAGCTAGA
TCTAATTTCTCAGAAGATAATGCCAGATATATAATCTAATTGCAACAAATTAGTTACAGA
TTAGATGATAAGCACAGTGAATAAAATGATATTGAGTTGACTGAATTAAAAGAAAAAATT
GAAAAGCAACAAGTAATTGAACCTCTTGCTTATTCCTTCTTATATAGAGTTAGCTACGAG
TTCTATTCCCAAAAGAAAAATTATGAACTTTTATATTTAAATGCTCTTTAATTCCTTGCT
TACACCCAACCTTAAGATATTCCTATTAGCTATTAACAAGATATCTCTCTTAAGATGGCT
ATAGCTATTTTAGTCTCACCTAAGATCTACAATTTCAGTGAACTTCTTCAACAAAGTGTT
GTTAAATCTCTTCAAAACACTACTTACTCATGGTTGTACACTTTGATTGAAACTTTTAAT
AGTGGAAACGTGGATAAGTATTACTAAGATCTTAAATCTTTTGATGCATAAATTAAATAA
AATGCCTTATTAGTTAGCAATCAAAAATTATTAGAAGAAAAAATTAGAATTATGGCCTTC
CTTGATTTGGTATTTAATTTACCTAAAAATGATAGAACCATATCCTTCTAGAAAGTAGCT
GAAAGAACTAAATAACCAGTCAACGAAATCGAATATTTGCTTATGAGAAGTATGGCTTTA
GGATTAGTTAAAGGATCTATAAATTAGGTTTAAGGCAACGTAACAATAAGTTGGATGATT
CCTAGAATCTTAGATAACTCAAGAATATAAATTATGAAAAATAAATTCGATGAATGGACT
AATAGTCTTAGAAATTTAATTTAATTAGTAGAATAAGAACCAGTACCTCTTTATTGA

>TTHERM_00388440(gene)
ATGGATTCAGATCTTTTGTAATAATTATAAGCTCAATTCCCTCAACAATAAACAATTTTA
GAATAGCTAGCCTTGTTATATACTTAAAAGTACATATTTATTTTATTAAGTCACTATTAG
ATTACTTAGTAAATAATAAAGTGATAAATGATTTCTATTCCAATCTCAAAGAAATCATCA
ACATAATATTTCGAATATTAGTTATTATTGCACAGTATTTGTATATTAAGCATTTTATAA
TATTTAATTATAGATTGTGGCATGAAATTACCTTAAATTTGAATATTTTGTTGCAAGATG
AAAATGTCCTTTAGGAGAGAAAAGCCTTATTAAAATTATATGATGGCTTTGTCAAAAAAT
TCATTAATAAGCTTGATTAACTTTTGTTAGCTAGATTCTTGACATTCGTAGCTAATGCAT
TTGACAGTAAAATATATTACTTTAAATAAAATATTCAATGAAAATTATAATTATTTACTA
TCTTTTTAAAAATAAAGCTAATGAAGAGAAGTTTAATTTCTTAGAATAAGCTAGATCTAA
TTTCTCAGAAGATAATGCCAGATATATAATCTAATTGCAACAAGTAATACATTAACACAT
ACTTAGCTATAATAATTCACTATCAGCATTTAATGTAACTTATAAATATTTTCTATAAAA
AATAGATTAGTTACAGATTAGATGATAAGCACAGTGAATAAAATGATATTGAGTTGACTG
AATTAAAAGAAAAAATTGAAAAGCAACAAGTAATTGAACCTCTTGCTTATTCCTTCTTAT
ATAGAGTTAGCTACGAGTTCTATTCCCAAAAGAAAAATTATGAACTTTTATATTTAAATG
CTCTTTAATTCCTTGCTTACACCCAACCTTAAGTAAAATATATTGTTTCAAAATATTCTA
TGGTTAATCTTTATTTAATAAAAGGATATTCCTATTAGCTATTAACAAGATATCTCTCTT
AAGATGGCTATAGCTATTTTAGTCTCACCTAAGATCTACAATTTCAGTGAACTTGTAATA
AATTAATAAAATTTTAAGCAAAAACAGCTAGTTAAAAAGTTAATTTAAATATTTTATATA
GCTTCAACAAAGTGTTGTTAAATCTCTTCAAAACACTACTTACTCATGGTTGTACACTTT
GATTGAAACTTTTAATAGTGGAAACGTGGATAAGTATTACTAAGATCTTAAATCTTTTGA
TGCATAAATTAAATAAAATGTAATTAATTAATTATTTATTGTAAATTCTTTTTTGATAAA
CATGTATCAAATAACTGTTAAATAAATAGGCCTTATTAGTTAGCAATCAAAAATTATTAG
AAGAAAAAATTAGAATTATGGCCTTCCTTGATTTGGTATTTAATTTACCTAAAAATGATA
GAACCATATCCTTCTAGAAAGTAGCTGAAAGAACTAAATAACCAGTCAACGAAATCGAAT
ATTTGCTTATGAGAAGTATGGCTTTAGGATTAGTTAAAGGATCTATAAATTAGGTAAATT
TAAATAAATTTTTAAAGCAAACTCATTCATTATTTCTTTATTTATTATTAATTTGTTAAC
AGGTTTAAGGCAACGTAACAATAAGTTGGATGATTCCTAGAATCTTAGATAACTCAAGAA
TATAAATTATGAAAAATAAATTCGATGAATGGACTAATAGTCTTAGAAATTTAATTTAAT
TAGTAGAATAAGAACCAGTACCTCTTTATTGA

>TTHERM_00388440(protein)
MDSDLLQQLQAQFPQQQTILEQLALLYTQKLWHEITLNLNILLQDENVLQERKALLKLYD
GFVKKFINKLDQLLLARFLTFVANAFDTNEEKFNFLEQARSNFSEDNARYIIQLQQISYR
LDDKHSEQNDIELTELKEKIEKQQVIEPLAYSFLYRVSYEFYSQKKNYELLYLNALQFLA
YTQPQDIPISYQQDISLKMAIAILVSPKIYNFSELLQQSVVKSLQNTTYSWLYTLIETFN
SGNVDKYYQDLKSFDAQIKQNALLVSNQKLLEEKIRIMAFLDLVFNLPKNDRTISFQKVA
ERTKQPVNEIEYLLMRSMALGLVKGSINQVQGNVTISWMIPRILDNSRIQIMKNKFDEWT
NSLRNLIQLVEQEPVPLY