Identifiers and Description

Gene Model Identifier

TTHERM_00388500

Standard Name

SWC2 (SWR complex component)

Aliases

PreTt24845 | 41.m00252

Description

YL1 nuclear protein; Member of the SWR complex. Co-purifies with Hv1 (Kanwal Ashraf et al., 2019).

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• DNA binding (IEA) | GO:0003677
• DNA-binding transcription factor activity (IEA) | GO:0003700

Biological Process

• regulation of transcription (IEA) | GO:0045449

Domains

• ( PF05764 ) YL1 nuclear protein
• ( PF08555 ) FAM32A
• ( PF08619 ) Alkali metal cation/H+ antiporter Nha1 C terminus
• ( TIGR01396 ) flagellar basal-body rod protein FlgB

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_04476.1	9.997093137033517e-262
	Description: hypothetical protein (926 aa)

General Information

No Data fetched for General Information

Associated Literature

1. Ref:30796450: Ashraf K, Nabeel-Shah S, Garg J, Saettone A, Derynck J, Gingras AC, Lambert JP, Pearlman RE, Fillingham J (2019) Proteomic analysis of histones H2A/H2B and variant Hv1 in Tetrahymena thermophila reveals an ancient network of chaperones. Molecular biology and evolution ( ):
2. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00388500(coding)
ATGGGAAAGAAAGAAAAGGTTTTCTTTGAGGAGGAAGATGATAACAAGAATGAGGAGATA
TATAATAGCGATTAAGATGATTAAGATTAAACTCCTTAAAACAAATCACATTCAAACAAT
TCTAATTAAGTAGGCGCATAGTCTAAAAAAGGAGCTGTTTAAGATAAATCAGCTAAAAAT
TCTAAAGTCACAGCATCAAAAGGAAATCAAAAGAAGAAATCATAAGAAGTAGATTCAAAA
GCTCCAAAGAAAGGGAAAGCTATTTCAAAAGGCAAAACTAATAAAAAAGGAAAAGACAAA
GGTGGTGCCGCTTCTAAAAAAGGAGGTAAAAAGAAAGTACAAAAAGGTAAAAAAGGAGAA
AAGGCTCCAGTGAAAGGTTCAGCTACTAAAAAAAAAGGAGGTGCTTAAGATAAGAAAAAA
GCAGATAATAGCGCTCTTAAAAAGACAAAAAAAATTTCATAGGGTAAAGCAGAAATCATA
GAAGATGAAAAAGAAGAAGTATTTAATGATGAAAGTAATGCAACTCCTCCTTAATATAGC
TAAACAAATGCTACTTCTTATTAAAGCGATAATATCTCAAAGCTAAAAAAAAAACCAGCT
GCAAAAGCTAGCAATAAAAAAACACAATAAACTCTAGCTGCATCTAAATTAAAAACGCAA
AAAGAGGAATAAGGAGAAAAATCTTCTAGTTTGAAAGCATTTAGCAGCATAATTAAAGAC
AAAAAGAATGGAAAAAACGTTCCTTTCCAGCCTACAGAAAATAAAGAGAGTGAAGAAATA
GAAATAGAACCTGAGACAGATGAATAAGAATCAGATCCTAATTAGCTTAAAAAGAAGCTA
GGTAAATCAGATTTAAATACTGAGCATCAAAATGGTGGAAATTAAGTAAAAGATGATAAA
AAAGGTTAATCTGAATCATCTTTAAAAAATAGAAGCAAGGTCTTAGTTGATAGTAAAAAA
CCTAATTCGAAGCTTTATAAAAATGATAATGGTCATGAATAAAGTACTACTTCTAAAGGG
TCTAAGGTATCTGCTATTAAAAACATAAGAAAGGATAGTTTAGATATGGAATTAGACAAT
ACTTTAGAAAACGAAGAGGATGAAGAAGATATTCTTTCAGGTTCTGAAGATTCTGAAAAT
AGCTAAAACAGTGATAATATAAAAACAAACAAAAAATAATTGGACAAGAAGAAAAGCGAT
AGTTTATCATCAAAACTTAAAAATAAAGCTGATGAAAGTGAAGATGATGGAGAAGGAGAA
GACAATGAAGAAGACGATGAAGTTGATGATGACGAAGAAGACGAAGAGAATGGTGATGAG
GATGATGATGATGACGAAAATGAAGGTGATGATGAAGAAGATAACGATGAAGACGAAAGT
AGTAGTGAAGAAGTAGTTTAGGCTGTAAGAACAATGACATTTCGTAGTAGAAGAGGTGAA
GGCATCAAAAAGCTTATGGAGTTATAAAAAAGAAATGAAGGATTCGGAGATGATTTAGAT
GACTTTTGGAAAGAAAATAAATATTTTGGTAAAATAACTGAAGTTACAAAGGCTAATGAT
GAAGAAGAAGACGAAGATTTTAATGAAGAAGAGTTTAAAGACGTAAAGGATGTATTCGAT
AGTGATTTTTAAGACACTAGTGATTTAGAAGATGATGGCGATGATGATTCAAATATGTCA
GATGAAGATTCAGACAGCGAGAAAAAGAAAAAACGTAATAAAGATAAGCCTAGCTATTTA
ATGAAAAAAGATGATGTTATTAGAAAAGAATAAGAAAAAATAGCAAAGCAGAGACAAAAA
TAAAAAGCTGAGCGCTTGAAATAGCTCGATACCTAAGAAGAAAATGAAATTTAAATATCT
TAAAAGATATAAAAGGAGAAAAGAGAGGCATAGATCACAATTTAGCTTGAAAAACGTACC
TTAAGATAAAGCACAAATGAAAAATCTCTTTTATCTCAAAGTTAGCTTTCTCCTCGTTTA
AAAAAGAAATTGCGCTTAAACGAAGATGGATCTGTAGACATTAATGGGTAATAAGGAGAG
TAAGGTGGATAAGCACAGGGTGCTGGAGGCAAAAAGAAACGTTATATCCATGATTTCTTG
ACCTAAGAGTAACTATTAAAAGAAGCTGTTTTTACAGAATTTGTGAATAGAAAATAATTA
GAAGACTTACTTCGTTTGGAAGAAGAGAAAAAATAATTCTCTTTAAGTAAAAAATTTATA
GACGAAGGACCTAAGATAATATATAAAAACTCTGCTAAAACAGATGAAAATTTAATCATA
TATCCAACATAAGAAGTATATGATAGCACAATAGGTAACTATATGTAATCTTTCAATCAA
TAAAAATAAATAAAAGAAAAAAAATTCCGCTATCACGATCCTAAAACTAATAAATCTTAT
AATACTCCAGAAGAATTTTATAAATATCGTACAATTTTGTATAAGTCAGAGCAAAATCGT
TACAAGTATCTTATTAAAGTTTACAAAGATCTCTAAGAAAAGAAGGAAGAGCTGCTAGAA
GAATTTGAGCCAAAACTTAAAGACAAATATAATAATAATTGTAATAATTCTTCAGATTCA
GATGACTCTTTATCATCATCTTCATAATCCTCATCTAATTCAGCAACTTCTTCTGCAGGT
AAAAAGAAGAAGAGAAAATCTTAATAAAAGAAAAAGAAACAAACTAAGAAAGCAAAAAGT
TAAAAATCTCGTATTTCATAAACTGCAGCTGAAAGAGAAGATGATGAAAATGATGAAGAA
AACGATGATGATAATAATAATAATTAAGATGATAAAATATTTATTGACTAAGATTCAGAT
TGA

>TTHERM_00388500(gene)
ATGGGAAAGAAAGAAAAGGTTTTCTTTGAGGAGGAAGATGATAACAAGAATGAGGAGATA
TATAATAGCGATTAAGATGATTAAGATTAAACTCCTTAAAACAAATCACATTCAAACAAT
TCTAATTAAGTAGGCGCATAGTCTAAAAAAGGAGCTGTTTAAGATAAATCAGCTAAAAAT
TCTAAAGTCACAGCATCAAAAGGAAATCAAAAGAAGAAATCATAAGTAAGATGATTAGAT
TTAAATAATTTTAAAGTGAATTATTGTTCTAAGTATATTAATATTAATTTTATTATCATT
ATCATCATCTAGGAAGTAGATTCAAAAGCTCCAAAGAAAGGGAAAGCTATTTCAAAAGGC
AAAACTAATAAAAAAGGAAAAGACAAAGGTGGTGCCGCTTCTAAAAAAGGAGGTAAAAAG
AAAGTACAAAAAGGTAAAAAAGGAGAAAAGGCTCCAGTGAAAGGTTCAGCTACTAAAAAA
AAAGGAGGTGCTTAAGATAAGAAAAAAGCAGATAATAGCGCTCTTAAAAAGACAAAAAAA
ATTTCATAGGGTAAAGCAGAAATCATAGAAGATGAAAAAGAAGAAGTATTTAATGATGAA
AGTAATGCAACTCCTCCTTAATATAGCTAAACAAATGCTACTTCTTATTAAAGCGATAAT
ATCTCAAAGCTAAAAAAAAAACCAGCTGCAAAAGCTAGCAATAAAAAAACACAATAAACT
CTAGCTGCATCTAAATTAAAAACGCAAAAAGAGGAATAAGGAGAAAAATCTTCTAGTTTG
AAAGCATTTAGCAGCATAATTAAAGACAAAAAGAATGGAAAAAACGTTCCTTTCCAGCCT
ACAGAAAATAAAGAGAGTGAAGAAATAGAAATAGAACCTGAGACAGATGAATAAGAATCA
GATCCTAATTAGCTTAAAAAGAAGCTAGGTAAATCAGATTTAAATACTGAGCATCAAAAT
GGTGGAAATTAAGTAAAAGATGATAAAAAAGGTTAATCTGAATCATCTTTAAAAAATAGA
AGCAAGGTCTTAGTTGATAGTAAAAAACCTAATTCGAAGCTTTATAAAAATGATAATGGT
CATGAATAAAGTACTACTTCTAAAGGGTCTAAGGTATCTGCTATTAAAAACATAAGAAAG
GATAGTTTAGATATGGAATTAGACAATACTTTAGAAAACGAAGAGGATGAAGAAGATATT
CTTTCAGGTTCTGAAGATTCTGAAAATAGCTAAAACAGTGATAATATAAAAACAAACAAA
AAATAATTGGACAAGAAGAAAAGCGATAGTTTATCATCAAAACTTAAAAATAAAGCTGAT
GAAAGTGAAGATGATGGAGAAGGAGAAGACAATGAAGAAGACGATGAAGTTGATGATGAC
GAAGAAGACGAAGAGAATGGTGATGAGGATGATGATGATGACGAAAATGAAGGTGATGAT
GAAGAAGATAACGATGAAGACGAAAGTAGTAGTGAAGAAGTAGTTTAGGCTGTAAGAACA
ATGACATTTCGTAGTAGAAGAGGTGAAGGCATCAAAAAGCTTATGGAGTTATAAAAAAGA
AATGAAGGATTCGGAGATGATTTAGATGACTTTTGGAAAGAAAATAAATATTTTGGTAAA
ATAACTGAAGTTACAAAGGCTAATGATGAAGAAGAAGACGAAGATTTTAATGAAGAAGAG
TTTAAAGACGTAAAGGATGTATTCGATAGTGATTTTTAAGACACTAGTGATTTAGAAGAT
GATGGCGATGATGATTCAAATATGTCAGATGAAGATTCAGACAGCGAGAAAAAGAAAAAA
CGTAATAAAGATAAGCCTAGCTATTTAATGAAAAAAGATGATGTTATTAGAAAAGAATAA
GAAAAAATAGCAAAGCAGAGACAAAAATAAAAAGCTGAGCGCTTGAAATAGCTCGATACC
TAAGAAGAAAATGAAATTTAAATATCTTAAAAGATATAAAAGGAGAAAAGAGAGGCATAG
ATCACAATTTAGCTTGAAAAACGTACCTTAAGATAAAGCACAAATGAAAAATCTCTTTTA
TCTCAAAGTTAGCTTTCTCCTCGTTTAAAAAAGAAATTGCGCTTAAACGAAGATGGATCT
GTAGACATTAATGGGTAATAAGGAGAGTAAGGTGGATAAGCACAGGGTGCTGGAGGCAAA
AAGAAACGTTATATCCATGATTTCTTGACCTAAGAGTAACTATTAAAAGAAGCTGTTTTT
ACAGAATTTGTGAATAGAAAATAATTAGAAGACTTACTTCGTTTGGAAGAAGAGAAAAAA
TAATTCTCTTTAAGTAAAAAATTTATAGACGAAGGACCTAAGATAATATATAAAAACTCT
GCTAAAACAGATGAAAATTTAATCATATATCCAACATAAGAAGTATATGATAGCACAATA
GGTAACTATATGTAATCTTTCAATCAATAAAAATAAATAAAAGAAAAAAAATTCCGCTAT
CACGATCCTAAAACTAATAAATCTTATAATACTCCAGAAGAATTTTATAAATATCGTACA
ATTTTGTATAAGTCAGAGCAAAATCGTTACAAGTATCTTATTAAAGTTTACAAAGATCTC
TAAGAAAAGAAGGAAGAGCTGCTAGAAGAATTTGAGCCAAAACTTAAAGACAAATATAAT
AATAATTGTAATAATTCTTCAGATTCAGATGACTCTTTATCATCATCTTCATAATCCTCA
TCTAATTCAGCAACTTCTTCTGCAGGTAAAAAGAAGAAGAGAAAATCTTAATAAAAGAAA
AAGAAACAAACTAAGAAAGCAAAAAGTTAAAAATCTCGTATTTCATAAACTGCAGCTGAA
AGAGAAGATGATGAAAATGATGAAGAAAACGATGATGATAATAATAATAATTAAGATGAT
AAAATATTTATTGACTAAGATTCAGATTGA

>TTHERM_00388500(protein)
MGKKEKVFFEEEDDNKNEEIYNSDQDDQDQTPQNKSHSNNSNQVGAQSKKGAVQDKSAKN
SKVTASKGNQKKKSQEVDSKAPKKGKAISKGKTNKKGKDKGGAASKKGGKKKVQKGKKGE
KAPVKGSATKKKGGAQDKKKADNSALKKTKKISQGKAEIIEDEKEEVFNDESNATPPQYS
QTNATSYQSDNISKLKKKPAAKASNKKTQQTLAASKLKTQKEEQGEKSSSLKAFSSIIKD
KKNGKNVPFQPTENKESEEIEIEPETDEQESDPNQLKKKLGKSDLNTEHQNGGNQVKDDK
KGQSESSLKNRSKVLVDSKKPNSKLYKNDNGHEQSTTSKGSKVSAIKNIRKDSLDMELDN
TLENEEDEEDILSGSEDSENSQNSDNIKTNKKQLDKKKSDSLSSKLKNKADESEDDGEGE
DNEEDDEVDDDEEDEENGDEDDDDDENEGDDEEDNDEDESSSEEVVQAVRTMTFRSRRGE
GIKKLMELQKRNEGFGDDLDDFWKENKYFGKITEVTKANDEEEDEDFNEEEFKDVKDVFD
SDFQDTSDLEDDGDDDSNMSDEDSDSEKKKKRNKDKPSYLMKKDDVIRKEQEKIAKQRQK
QKAERLKQLDTQEENEIQISQKIQKEKREAQITIQLEKRTLRQSTNEKSLLSQSQLSPRL
KKKLRLNEDGSVDINGQQGEQGGQAQGAGGKKKRYIHDFLTQEQLLKEAVFTEFVNRKQL
EDLLRLEEEKKQFSLSKKFIDEGPKIIYKNSAKTDENLIIYPTQEVYDSTIGNYMQSFNQ
QKQIKEKKFRYHDPKTNKSYNTPEEFYKYRTILYKSEQNRYKYLIKVYKDLQEKKEELLE
EFEPKLKDKYNNNCNNSSDSDDSLSSSSQSSSNSATSSAGKKKKRKSQQKKKKQTKKAKS
QKSRISQTAAEREDDENDEENDDDNNNNQDDKIFIDQDSD