Identifiers and Description
Gene Model Identifier
TTHERM_00395710Standard Name
THD5 (Tetrahymena Histone Deacetylase 5)Aliases
PreTt23595 | 42.m00329 | 3813.m01547Description
THD5 histone deacetylase family protein; Histone deacetylase family protein; suppresses DNA transcription by deacetylation of histones; localizes to macronucleusGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Biological Process
- cocaine biosynthetic process (IDA) | GO:0050799
Domains
No Data fetched for Domains
Gene Expression Profile
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_11546.1 9.997093137033517e-262 Description: histone deacetylase (682 aa) Oxytricha Contig549.1.g14 1.9999366565375063e-113 Description: Histone deacetylase domain WormBase WBGene00007953 3.000074895537278e-78 Description: locus:hda-11 status:Partially_confirmed UniProt:Q18477 protein_id:CAA94910.3 Stentor Coeruleus SteCoe_25228 6.813556821545298e-46 Description: None SGD YNL021W 2.9992476920535046e-16 Description: HDA1 Putative catalytic subunit of a class II histone deacetylase complex that also contains Hda2p and Hda3p; Hda1p interacts with the Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation DictyBase DDB_G0268024 9.997764199084386e-16 Description: hdaA on chromosome: 1 position 1320084 to 1322172
General Information
No Data fetched for General Information
Associated Literature
- Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
Sequences
>TTHERM_00395710(coding)
ATGTACACACTAATTTGCGCTGTTTAAGATTTAGCTTTATTTGGAATTTTTATTACAGGG
TTGGTCTTATTAGAATGGCAAATAATTGTATTTCCCATTTTAATTTACATCCTCATCCCA
TTTTTAAACGAGTTGGTCTACAATTGCTTTGCTAAATTATTATTCACAATAGAAAAGGAG
AAGAAAAGGATGGAGTAAAGGTATTCTTAATCAGAATTAGAAAATAAATATATTGAAAAT
TTACCTATTTTATACCATCCCTCATACAACATTACAGCTTGTGGGATTGAAAAACTTCAC
CCTTTTGATTCTGTAAAGTATGGAAGAGTTTTTAATATACTCAAAGAAAAAGGATTTCTA
TAAGAATAAGGTTTCTATAAGCCAAAAGAAAAAGTAGGAAGAGGCTTAATGCTGCATTTA
GGAATGTCTCCTTTGTATTTACTTTATCTTAATTATGCTGCTTATGTATCCAAATGTATA
GAAATTCCTCTATTCTTCCTACCTGCCAGCTTCTTAAGATGGAAAGTATTAGATCCTATG
ATGTTTTCTACTCAGGGTTCAATAGATGCCGCCGTTTTATCTTTAAAAAGAGGCTGGTCT
ATAAATTTAAGTGGAGGCTATCACCACGCTTGCAGGTAATCTGGAGGCGGATTTTGCATA
TATCCAGACATATGTTTCGCTATAGAATATTTAAGAAAATGTTTTGGCATAAAAAGATGC
ATGATTGTAGATTTAGATGCTCATCAAGGAAATGGACATGAAAGAGATTTTATAGATGAT
AAAGAAAATACATTTATATTAGATTTTTACAATCACAGTATTTATCCAGCAGATACCTTT
GCAGCCAAAGGTATAAGTCTTTCTAAAAACGTAGATTTTGATACATCTGATTCAGAATAT
ATCTCTATGTTGAGAAAGACACTTTAAAAAATTCTTGATTAATTCAAACCTGAGTTTTTA
CTATATAATGCAGGAACTGATTGTCTTGAAGGTGATCGTTTGGGTTAAATGAATCTCTCT
CAAAATTGCATAATTCAGAGAGATTAAGTTGTATTTGAAGAATGCTTAAATAGAGATATA
CCCTTAACTATGGTGCTTTCAGGAGGGTATTAGTAAATAAATGCACCTGTTATAGCTGAC
TCTATTTTAAATCTTGATTAAAATTTAAAAATAAAAAATTACAATAGAAAAAAATTATAA
AACCCATGA>TTHERM_00395710(gene)
ATGTACACACTAATTTGCGCTGTTTAAGATTTAGCTTTATTTGGAATTTTTATTACAGGG
TTGGTCTTATTAGAATGGCAAATAATTGTATTTCCCATTTTAATTTACATCCTCATCCCA
TTTTTAAACGAGTTGGTCTACAATTGCTTTGCTAAATTATTATTCACAATAGAAAAGGAG
AAGAAAAGGATGGAGTAAAGGTATTCTTAATCAGAATTAGAAAATAAATATATTGAAAAT
TTACCTATTTTATACCATCCCTCATACAACATTACAGCTTGTGGGATTGAAAAACTTCAC
CCTTTTGATTCTGTAAAGTATGGAAGAGTTTTTAATATACTCAAAGAAAAAGGATTTCTA
TAAGAATAAGGTTTCTATAAGCCAAAAGAAAAAGTAGGAAGAGGCTTAATGCTGCATTTA
GGAATGTCTCCTTTGTATTTACTTTATCTTAATTATGCTGCTTATGTATCCAAATGTATA
GAAATTCCTCTATTCTTCCTACCTGCCAGCTTCTTAAGATGGAAAGTATTAGATCCTATG
ATGTTTTCTACTCAGGGTTCAATAGATGCCGCCGTTTTATCTTTAAAAAGAGGCTGGTCT
ATAAATTTAAGTGGAGGCTATCACCACGCTTGCAGGTAAACTAAAAGTTTATAAAAAATA
TTAACATACTATTACAAATTTTTGAATAAAATAACAAAATTACATCTAATTATTATGTTT
TTTAACTAAAAATAAATTTCATTTCTGCATCTTTTAACAATTTAAACATCTAAGATACTC
TGAAAAGCAGAAAGTTGCCCTAGAAAATTAAAAAATTTACTCAAAATTTTAAATAAATAA
TTTCAGTAGTGAATTAAGAAACCAATAAAAGCCTAATCAGTATTTATCAATAAAATTATA
AACATCTAATAAAATCTAACATAGCATCAATAGGAATAAAAAGTAACTAGTATAGAAATG
ATTAAATTATAGAGTAAATTTTAAAAAAATAATATAGAAGTATAAAACAGGATTTAATTA
TTAATACAACATTCACCCAATTTATCATCTCCAAAAAATAGTTATTTATTTATTTAATTT
TGATTAGAATAAGTTTTGAAATTCTTTTTTCTTTTATTTAATTTAAATTCGATGTTTATC
GTTTCATTTTATTAAAATTTAGGTAATCTGGAGGCGGATTTTGCATATATCCAGACATAT
GTTTCGCTATAGAATATTTAAGAAAATGTTTTGGCATAAAAAGATGCATGATTGTAGATT
TAGATGCTCATCAAGGAAATGGACATGAAAGAGATTTTATAGATGATAAAGAAAATACAT
TTATATTAGATTTTTACAATCACAGTATTTATCCAGCAGATACCTTTGCAGCCAAAGGTA
TAAGTCTTTCTAAAAACGTAGATTTTGATACATCTGATTCAGAATATATCTCTATGTTGA
GAAAGACACTTTAAAAAATTCTTGATTAATTCAAACCTGAGTTTTTACTATATAATGCAG
GAACTGATTGTCTTGAAGGTGATCGTTTGGGTTAAATGAATCTCTCTCAAAATTGCATAA
TTCAGAGAGATTAAGTTGTATTTGAAGAATGCTTAAATAGAGATATACCCTTAACTATGG
TGCTTTCAGGAGGGTATTAGTAAATAAATGCACCTGTTATAGCTGACTCTATTTTAAATC
TTGATTAAAATTTAAAAATAAAAAATTACAATAGAAAAAAATTATAAAACCCATGA>TTHERM_00395710(protein)
MYTLICAVQDLALFGIFITGLVLLEWQIIVFPILIYILIPFLNELVYNCFAKLLFTIEKE
KKRMEQRYSQSELENKYIENLPILYHPSYNITACGIEKLHPFDSVKYGRVFNILKEKGFL
QEQGFYKPKEKVGRGLMLHLGMSPLYLLYLNYAAYVSKCIEIPLFFLPASFLRWKVLDPM
MFSTQGSIDAAVLSLKRGWSINLSGGYHHACRQSGGGFCIYPDICFAIEYLRKCFGIKRC
MIVDLDAHQGNGHERDFIDDKENTFILDFYNHSIYPADTFAAKGISLSKNVDFDTSDSEY
ISMLRKTLQKILDQFKPEFLLYNAGTDCLEGDRLGQMNLSQNCIIQRDQVVFEECLNRDI
PLTMVLSGGYQQINAPVIADSILNLDQNLKIKNYNRKKLQNP