Identifiers and Description

Gene Model Identifier

TTHERM_00419740

Standard Name

RAB1D

Aliases

PreTt07104 | 46.m00159 | 3679.m00009

Description

RAB1D small guanosine triphosphatase family Ras family protein; Rab I family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

  • ferric-hydroxamate transmembrane transporter activity (IEA) | GO:0015622
  • glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity (IEA) | GO:0008886
  • rhamnulokinase activity (IEA) | GO:0008993

Domains

  • ( PF00025 ) ADP-ribosylation factor family
  • ( PF00071 ) Ras family
  • ( PF00735 ) Cell division protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF03029 ) Conserved hypothetical ATP binding protein
  • ( PF08477 ) Miro-like protein
  • ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_11087.1 4.997910161537908e-106
Description: Ras family protein (211 aa)
Oxytricha Contig15751.0.0.g87 6.998463833652622e-61
Description: Ras family
WormBase WBGene00004272 4.001202823045957e-54
Description: locus:rab-8 status:Confirmed UniProt:G5EFC1 protein_id:CCD68351.1
SGD YGL210W 6.001502944943701e-53
Description: YPT32 Rab family GTPase, very similar to Ypt31p; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi
DictyBase DDB_G0277867 9.998397555368434e-52
Description: rab1B on chromosome: 3 position 743092 to 744234
Stentor Coeruleus SteCoe_25677 1.185064864233981e-27
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences 

>TTHERM_00419740(coding)
ATGTCTCTTTAACAAGATTACGATTATGCATTTAAAATTGCTATTACTGGAAGCTCATCA
GTCGGTAAAAGTTCTTTGATGATGAGATTTACAGACGATGTATTTAATGTAGTACTCATT
CCTACTATTGGCGTTGACTTTAAAATTCGTTCATTTACTGTAGACAACAAAATAGTAAAG
CTTAATATTTGGGATACAGCTGGTTAAGAAAGATTTGATGCTATAATTAAGGCTTATTAC
AAGGGAATACATGCATGTTTAATTGTATTTGATTTAACAGATCGTCAAACATTCCAAGAT
GTTTATAAGTGGTTTGATAAGTGTAAACAAAATGCCAAAAATGAAGTTAAATTAATTTTA
GTAGGTAATAAAGCTGATCTGGAAGAATAAAGAGCAGTGACTTATGAAGAAGCATGTAAT
CTCGCTTAGGAACTAGATATGTAATATATTGAAACTTCTGCTAAATCAAAATAAAATGTA
GATCAATGCTTTATTTAATTGAGTCAAGACCTCATTTAGTAATATATAAAATAAAACAAA
TAAATTTAATTTGAAACATAAAAATAAAAATCTCATCTTAAGCCTGGTGGTGCTACTATT
TAAAAATAATAATAAAAATCAGCATAATGCTGCTGA


>TTHERM_00419740(gene)
ATGTCTCTTTAACAAGATTACGATTATGCATTTAAAATTGCTATTACTGGAAGCTCATCA
GTCGGTAAAAGTTCTTTGATGATGAGATTTACAGACGATGTATTTAATGTAGTACTCATT
CCTACTATTGGCGTTGACTTTAAAATTCGTTCATTTACTGTAGACAACAAAATAGTAAAG
CTTAATATTTGGGATACAGCTGGTTAAGAAAGATTTGATGCTATAATTAAGGCTTATTAC
AAGGGAATACATGCATGTTTAATTGTATTTGATTTAACAGATCGTCAAACATTCCAAGAT
GTTTATAAGTGGTTTGATAAGTGTAAACAAAATGCCAAAAATGAAGTTAAATTAATTTTA
GTAGGTAATAAAGCTGATCTGGAAGAATAAAGAGCAGTGACTTATGAAGAAGCATGTAAT
CTCGCTTAGGAACTAGATATGTAATATATTGAAACTTCTGCTAAATCAAAATAAAATGTA
GATCAATGCTTTATTTAATTGAGTCAAGACCTCATTTAGTAATATATAAAATAAAACAAA
TAAATTTAATTTGAAACATAAAAATAAAAATCTCATCTTAAGCCTGGTGGTGCTACTATT
TAAAAATAATAATAAAAATCAGCATAATGCTGCTGA


>TTHERM_00419740(protein)
MSLQQDYDYAFKIAITGSSSVGKSSLMMRFTDDVFNVVLIPTIGVDFKIRSFTVDNKIVK
LNIWDTAGQERFDAIIKAYYKGIHACLIVFDLTDRQTFQDVYKWFDKCKQNAKNEVKLIL
VGNKADLEEQRAVTYEEACNLAQELDMQYIETSAKSKQNVDQCFIQLSQDLIQQYIKQNK
QIQFETQKQKSHLKPGGATIQKQQQKSAQCC