Identifiers and Description

Gene Model Identifier

TTHERM_00446180

Standard Name

RPB7 (RNA polymerase II subunit 7)

Aliases

PreTt03885 | 51.m00251 | 3704.m00106

Description

RPB7 RNA polymerase Rpb7 amine-terminal domain protein; RNA polymerase Rpb7- N-terminal domain containing protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Biological Process

Domains

  • ( PF03876 ) RNA polymerase Rpb7, N-terminal domain
  • ( PF07650 ) KH domain
  • ( TIGR00448 ) DNA-directed RNA polymerase

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_10832.1 6.996525358388811e-93
Description: RNA polymerase Rpb7 domain-containing protein (174 aa)
DictyBase DDB_G0284891 0.0000000000599805963605737
Description: rpb7 on chromosome: 4 position 2602996 to 2604032
SGD YDR404C 0.0000000029989608248573072
Description: RPB7 RNA polymerase II subunit B16; forms two subunit dissociable complex with Rpb4p; involved in recruitment of 3-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions; also involved in translation initiation
WormBase WBGene00021845 0.000000007002490258088747
Description: locus:rpb-7 status:Partially_confirmed UniProt:Q9N3C9 protein_id:CCD72992.1
Oxytricha Contig21831.0.g92 0.0007999190683310628
Description: SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00446180(coding)
ATGTTTTATCATACATCTGGTTTAAGAACTATTTTGTAGATTCACCCTACTCATATGGGT
ATGCTTATTGGAAATGATAAAGTCAACCTTAATAATAATGATTTGCTTAAAAAAGAATTA
ATTGAAAAAGTAGAAGGTAAAAAAAGTAATGAACATGGATATATTATTTTGGTAGTAAAT
TTAAGATATATGAGCAAACCATTAATTGATTATGATGGCTTTATTAAAGTTGAGATATAG
TTTGATGCATTAACATTTAAACCATAACTTAAAGAATATATTGATATCTAAATAACTGAA
ATCAAGCAAAATCACATTGCTGGTTCTGTTGGCCCTATGAACATATTTTATGTCCCCAAT
CGTAAGCTTCCTTAACAACTTTAAAACGAATTAAAAGATGGTAAACTTGAATCTGATGAT
TTAACCTTATACGAAGGTGATAAATTGAGAGTTTTGATAGAAACTATTAACAATGATAAA
ATCCTTTGTAAAGTAGATGATGATTTTAATAGTTATTAATGA


>TTHERM_00446180(gene)
ATGTTTTATCATACATCTGGTTTAAGAACTATTTTGTAGATTCACCCTACTCATATGGGT
ATGCTTATTGGAAATGATAAAGTCAACCTTAATAATAATGATTTGCTTAAAAAAGAATTA
ATTGAAAAAGTAGAAGGTAAAAAAAGTAATGAACATGGATATATTATTTTGGTAGTAAAT
TTAAGATATATGAGCAAACCATTAATTGATTATGATGGCTTTATTAAAGTTGAGATATAG
TTTGATGCATTAACATTTAAACCATAACTTAAAGAATATATTGATATCTAAATAACTGAA
ATCAAGCAAAATCACATTGCTGGTTCTGTTGGCCCTATGAACATATTTTATGTCCCCAAT
CGTAAGCTTCCTTAACAACTTTAAAAGTAATAATTTTATTTTTAATTAATTATGTTAAAT
ATTAAAAATTGGAATAGTGTATTTGTTTTTTTATATAGATCATGTTTATTAAAGATTATT
AACTTATAAATTAGCGAATTAAAAGATGGTAAACTTGAATCTGATGATTTAACCTTATAC
GAAGGTGATAAATTGAGAGTTTTGATAGAAACTATTAACAATGATAAAATCCTTTGTAAA
GTAGATGATGATTTTAATAGTTATTAATGA


>TTHERM_00446180(protein)
MFYHTSGLRTILQIHPTHMGMLIGNDKVNLNNNDLLKKELIEKVEGKKSNEHGYIILVVN
LRYMSKPLIDYDGFIKVEIQFDALTFKPQLKEYIDIQITEIKQNHIAGSVGPMNIFYVPN
RKLPQQLQNELKDGKLESDDLTLYEGDKLRVLIETINNDKILCKVDDDFNSYQ