Identifiers and Description

Gene Model Identifier

TTHERM_00446190

Standard Name

RRM25 (RNA Recognition Motif-containing protein 25)

Aliases

PreTt03886 | 51.m00252 | 3704.m00107

Description

RRM25 RNA recognition motif protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• nucleic acid binding (IEA) | GO:0003676
• zinc ion binding (IEA) | GO:0008270

Domains

• ( PF00076 ) RNA recognition motif
• ( PF00098 ) Zinc knuckle
• ( PF02810 ) SEC-C motif
• ( PF08777 ) RNA binding motif

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10831.1	4.000010081770683e-74
	Description: hypothetical protein (298 aa)
Tetrahymena borealis	EI9_07394.1	4.000010081770683e-74
	Description: hypothetical protein (875 aa)
WormBase	WBGene00004700	0.00000000000020009182674645818
	Description: locus:rsp-3 Probable splicing factor, arginine/serine-rich 3 status:Confirmed UniProt:Q9NEW6 protein_id:CAC35847.2
WormBase	WBGene00001049	0.00000000000020009182674645818
	Description: locus:dog-1 status:Partially_confirmed UniProt:O62217 protein_id:CAB04262.1
Oxytricha	Contig6339.0.g105	0.0000000000019997478866288316
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
DictyBase	DDB_G0280393	0.0000000029989608248573072
	Description: DDB_G0280393 on chromosome: 3 position 3254509 to 3256772
SGD	YIR001C	0.0000000039998859049333245
	Description: SGN1 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00446190(coding)
ATGGATTAATAGAGATTGAATTTAAGAAGAAATATTCAATTTATTTTGAAATAAAAATAT
AAATATAAATTAATATTTTAAAGAAAGAATAAAAAAAGAAATATGAGCAGAGAACATTCA
AGAGACAGAGACAGTAAAAGCCAAAAGAAATTATTCTTGGGTAACCTCTCTAGAGATGTT
GAAGAAAGAGATGTTAAAGATCTTTTCGAAAAGCATGGTAAAATCAGTGAAATCAAGATT
AAAAAGAAAGGTCCTAACTGTTATGGATTTATCGAATTCGAAGATTCCCGTGATGCTAAG
GATGCTCTCAAGGAAAATGGTAATTCATTGAAGGGTAAAGAACTCAGATTAGAATTCGGT
AATGGCGGCAGAAAGAAAAGAAACGAAGGCTGTTATACTTGCGGTTCTCTCCATCATATT
GCTAAAGACTGTAGCAAAACTAGAAGAACTAGCAGCAATGGTAATAAAAATAGATGCTAT
AATTGTGGTTCAACTAGCCATAAGGTCAGAGACTGCCATCAAAATAGAAGAAGCAGATCC
AGAGATAGAAGAAGAAGATCAAGATCTCGTTCTGACTCTAGAAGCAGAAGACAAAGAAGC
AGATCTGACGACAGAAACAGAAGAAGAAGAGACTCTCGCTCTGACTCTAGAAATAGAAGA
AGAAGAAGAGATATGTCTAGATCTAGATCCGCTGGTGACAGAAGAAAGAGAAGTAGTGAT
AGAGGTGATAGAAGAAGACCTAGTCCTGATAATAGAAGAAGAAGATCAAGCTCAAGAGGT
CAAAGAAGATCCGACAGCAGAAGCTATAATAACAGAAATAATAACAGATCTAATTCAGCT
GGTTCTCATAAAAATGATAGATCAGGTAGCAATCTCAACAATGGAAACAATCAACCTGCT
AACAACAATTCTTATAACAATGGTAATAACAACAATTCTCGTTCTCCCTCCAGACAATCT
AACTCAAATTGA

>TTHERM_00446190(gene)
ATGGATTAATAGAGATTGAATTTAAGAAGAAATATTCAATTTATTTTGAAATAAAAATAT
AAATATAAATTAATATTTTAAAGAAAGAATAAAAAAAGAAATATGAGCAGAGAACATTCA
AGAGACAGAGACAGTAAAAGCCAAAAGAAATTATTCTTGGGTAACCTCTCTAGAGATGTA
AAAGATTTGAATCCACTTATTTAATTTAAAATTAGAAATAAATTCGATATGATCCATATA
TGGTCTGTGATATGTTTTCATTTTTGATGAATGAATAATATAAAAATATCAAATAATCAT
AAAAAATGCTAACTACCTAACCAAACGTTATATATTTTAATTCTAAATAAATATTAAATA
GGTTGAAGAAAGAGATGTTAAAGATCTTTTCGAAAAGCATGGTAAAATCAGTGAAATCAA
GATTAAAAAGAAAGGTCCTAACTGTTATGGATTTATCGAATTCGAAGATTCCCGTGATGC
TAAGGATGCTCTCAAGGAGTAATTTATATTCTTTTATTAAAAATTTCCTTAAGGCATTAT
TTTTATGCTTCTAAATATCATTCGCTGCTATGAAAATTTTTCAAGGAGCAGACAGATGTG
GTGTACTTGAGTTATTCTAGTTAGAATAATTTATTTTAGATGGCTTTTGCTTTACTTAAC
CCCTTTTTTAATTTTAAAAATATTCCATGATGGTAGGTAATAAAAATATTAAAAATTGGT
TTTATAAAATAGAAATGGTAATTCATTGAAGGGTAAAGAACTCAGATTAGAATTCGGTAA
TGGCGGCAGAAAGAAAAGAAACGAAGGCTGTTATACTTGCGGTTCTCTCCATCATATTGC
TAAAGACTGTAGCAAAACTAGAAGAACTAGCAGCAATGGTAATAAAAATAGATGCTATAA
TTGTGGTTCAACTAGCCATAAGGTCAGAGACTGCCAGTAAGATTATTTAGTTAAAATAAT
TGAAAGTATAACGAATGTATTTAATAAAATAATAGTCAAAATAGAAGAAGCAGATCCAGA
GATAGAAGAAGAAGATCAAGATCTCGTTCTGACTCTAGAAGCAGTAAACCTTTTATTAAA
AATATATAAATCAACTCTGAAATTTGATCATCAAAACAAAATTTCAATAAGTGCAGTCGT
CTACAAAATCTTATTTAAATTAAAATGAAATAATGAAAAAATTAAACAAAAATTTTGCAA
AATAAAGAAAAAAGCTTGATTTTTGAAAAAAAGATTTTTGGTATATCAACAATTTCTTTA
TTTTAAGTAGGTGTCTCCCCACAATTTTATTTGCAAAGATAATTTAGATAATTAAGGATG
CAATTAATATAATTTCCTTCTATTTTATTAGATTTGTCTGTCTGTCTTAATTACATGATT
ATAACTTGACATTCAAAATTTTACTTCCTAAGTTTATTAATTATTTCAATAAAAAATATC
ATTTAAATTTAATATGAGATGGATTGATTTATTCTTGCTTTAACTTGATCAATTACAACC
AAAATTACAAAATTAAATTTTATAAAAAAATGAAAGAATTTCGATTTGAAATTTTTATAA
AATATTTTAAAATGAATTTCAGAAAAAACCACATTTTCAAATTGTAATTTATTTATTTAC
CTATTTACTTGTGAACTAACAGGAAGACAAAGAAGCAGATCTGACGACAGAAACAGAAGA
AGAAGAGACTCTCGCTCTGACTCTAGAAATAGAAGAAGAAGAAGAGATATGTCTAGATCT
AGATCCGCTGGTGACAGAAGAAAGAGAAGTAGTGATAGAGGTGATAGAAGAAGACCTAGT
CCTGATAATAGAAGAAGAAGATCAAGCTCAAGAGGTCAAAGAAGATCCGACAGCAGAAGC
TATAATAACAGAAATAATAACAGATCTAATTCAGCTGGTTCTCATAAAAATGATAGATCA
GGTAGCAATCTCAACAATGGAAACAATCAACCTGCTAACAACAATTCTTATAACAATGGT
AATAACAACAATTCTCGTTCTCCCTCCAGACAATCTAACTCAAATTGA

>TTHERM_00446190(protein)
MDQQRLNLRRNIQFILKQKYKYKLIFQRKNKKRNMSREHSRDRDSKSQKKLFLGNLSRDV
EERDVKDLFEKHGKISEIKIKKKGPNCYGFIEFEDSRDAKDALKENGNSLKGKELRLEFG
NGGRKKRNEGCYTCGSLHHIAKDCSKTRRTSSNGNKNRCYNCGSTSHKVRDCHQNRRSRS
RDRRRRSRSRSDSRSRRQRSRSDDRNRRRRDSRSDSRNRRRRRDMSRSRSAGDRRKRSSD
RGDRRRPSPDNRRRRSSSRGQRRSDSRSYNNRNNNRSNSAGSHKNDRSGSNLNNGNNQPA
NNNSYNNGNNNNSRSPSRQSNSN