Identifiers and Description

Gene Model Identifier

TTHERM_00455309

Standard Name

POLK1 (DNA polymerase kappa )

Aliases

3712.m00915

Description

DNA polymerase IV / kappa; homolog to human POLK; POLK1 DNA polymerase kappa protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• damaged DNA binding (IEA) | GO:0003684
• DNA-directed DNA polymerase activity (IEA) | GO:0003887

Biological Process

• DNA repair (IEA) | GO:0006281

Domains

• ( PF00096 ) Zinc finger, C2H2 type
• ( PF00817 ) impB/mucB/samB family
• ( PF01781 ) Ribosomal L38e protein family
• ( PF03985 ) Paf1

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_13728.1	9.997093137033517e-262
	Description: DNA polymerase IV/kappa (885 aa)
Oxytricha	Contig2834.0.g88	5.999773492405769e-126
	Description: impB/mucB/samB family
WormBase	WBGene00017696	1.0002223712504345e-79
	Description: locus:polk-1 DNA polymerase kappa status:Confirmed UniProt:P34409 protein_id:CCD62142.1
DictyBase	DDB_G0287149	6.002524403568988e-55
	Description: DDB_G0287149 on chromosome: 4 position 5382189 to 5383827
Stentor Coeruleus	SteCoe_11004	9.221146422925876e-47
	Description: None
SGD	YOR346W	0.000000000000006000101554955223
	Description: REV1 Deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p;

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00455309(coding)
ATGTCTTAAAGCTAACATAATTTAGAAGAAAATCAATAGCAAAAAGGAGAGGTGCAATAC
CTTTTTGTGGGAAATAAAGCTGGTTTAGATAATGTAGATAAAGAAAAAATAAATAAAATT
ATTAATGAAACCACTTAATCAAGTGAATTTTATAAAAGATAGTAAGTGAAAAGGGATTAA
TATGATGAAAGGATTAAAGAAATGAAATTAATAATAGAACAAACCAAATAAGATCATATT
AAGCTTTTGAAAGTCAAGAAAGAATGTGAAGATAAATTAGATTAAATTAAATAATTAGTT
CAGCTTGATAGGATTTGGGTTCATTTTGATATGGATATGTTTTATGTTGCTTGCGAACTT
AAGGATAGACCTCAATTAAAAGATTTGCCAGTGGCTGTTGGTGGTATGTCAATGATTAGT
ACAGCTAATTATGTTGCTAGAAAATTTGGTGTAAGATCTGCTATGCCTGGTTTCATTGCT
AAAAAGCTATGTCCTTAATTAATTTTAATTCCTTGTAATTTTGAAAAATATAGAAAAGCA
AGTGATTAATTCAAAAAAGTCTTATACTAATATGATCCTAATTTAGAAAGCATGGGGCTA
GATGAGGCTAATCTGGATATAACAGATTATTTACAATAAAATAATATTAACTCAGATGCA
CAAATATACGATTTATGTCATTCTATTAGAAATCAGGTTTTTGAATCCACTGGAGGTCTA
ACTTGTTCTTGTGGTATTGGACCAAACAAAATGCTAGCTAAAATCTGCTCAGATATGAAT
AAGCCCAATGGTTAGTTTTAGTTGATAAATGATGAAGAAAAAATTAAGGATTTTATGAAA
GATTTGCCTATTAGAAAAATCCCTGGGATTGGGAATGTGACAGAATAAATCTTGAAAGGT
ATTGGAATAGAAAAATGTAGCTAAATCCTAGAAAGAGTTATTGATATAAAAATATGTTTT
AAAGATCTTTCTTTTGATCACTTAGTTTCTAGTGCTTTAGGTATAGGTCGTTCATGGCAT
GAAGAAGAGACGGAGAAAAAAAGTCTTTCAGTAAGTAGAACTTTTTAAGCAATATCAACT
ATAGAGGAAATAAACGAAAAAATACATTAAATTTCTCAGCTTTTAGCTGAAGATGCTAAA
GCAGAATAAAAAATTGGAAAGCATTTGGCTGTTTCTTTTAAAAATGTAAAATTTTAAATG
AGATCTAAAAACAGAATGCTTGATAAATATATTTAAGATAGTGAGTAAATTGAGAAAGTA
GCTAAGGAATTAGTTAAAGAATTATTACCTACTGAGCCTTTGAGGTTAATTGGAATTAGA
TTAAGTCAATTAGCTGATGAAAATGAGCTAAAAAACCAAGGATTGAGCAAATATTTTGCT
AAAAATGATAAAAGTTTAAACAATTCAAGAATTTAATCTTCAAGTAAGAGTTCTAAAAAA
TCATTTGACAATAAAAACCAAAATTCCTTGACAACTTATTTCAGTAATTAAGAAAAGAAT
AATTCAAGCTTAAATGTCTATTAAAATTAAAAAATAAAAGGACTTCTTAATGATAAAAAT
TTAGGAGACGTTTCTAATCATTAAGAAGCATCTAATTTCAGTATAAATCCAAATAATTTA
TAAAAGTCACATTCAAATAATTTAATTTAGCCCTCATTCCTAAGCTTAATAGATAAATAT
GAAAGTGAGGATCAAGAGGATGAAAACGAAGATTCTTTTTAAGAAAATAACTCATGTAAT
AAGTTATAAAAATAAACAAAACATTAAGAGAGTATGTTGAATGAAATGAGTTATAGTAAC
AATTAATAGTAATTCTAAATAAGTAAAGATAATAAGTAATATATAAATGAAAGTGATTGT
GAAAGTAAAAATGAAAGCGAAATAGACAACAGATAAAAATAAGAAGAATATGAAAATGAT
GATGATGACGATGAAGATGGAGACGAAGACGACGATGATGATTTAATTTACCTAAAAAAA
ATTTTAAATAAAAATGTTTCAGAAAGACTTTCTTAGATATCTGAAAAAAAAAGTTAAGAG
GAAAAAAGATAGTCATTATCAGATAAAAATAATTCTATGACACCTTAATTTATACAATAG
AGTGGAGGAAGTTAAAATTAAAGGAATGGCTCTATTTAACAAAAAGAAACATAAATGATA
CCTGAAACGGCTCACTAAAATAAACAATTTTAATCTTAGTAAATAAATTAGACTCAATAC
TATTAAAGAAAATCAGAAAAAAGTGAAATTAGCTTCTAGTAATAATCAATATAATCACAA
GAATATATGCATCTGATGATGGGTTCTGAAGAGTCCTCTAAGTTAGATATTAGAATAAAT
AGAAATATATTTCCTAATAAAGTGTAAAATGAAAAAGAAAATAGCAATTCCATGTATGTA
TATGATGAAAATGCTGAATATATGTCCTAACAATATATTGAGCATAATTCAGGATCATAA
ATGAATAATAAAAAGAGAGTTCCTGCTGATGCACTTACTCCACAATAGGTTGAAGAGCAG
TTAAAATTGAAAAAAAAATTTATTCCTAGGCTATTTGAATGTCCAATATGCTTTTTATAA
CTCGATTCTTATGGTAATGCTACATTTGTTAATAATCATATAACAAACTGTATGAAAGCC
TAAGAGGAGAAATTTAATAAGCTTGAATAAAATAATTCTTAATAAAATACATAGAAAGAA
GAAAAAAAACCAGTTTCTATATTAAATAATTATACCACAAAATAAGATACAAAGACAAAG
TAAAGTGATAAAAAAAATAGAAAGTCTGATTAAAAAAAATAGTAAAAAAACAGTTTTACA
TTAGATTCATTTGTAATAAAATAAAAAAATTGA

>TTHERM_00455309(gene)
ATGTCTTAAAGCTAACATAATTTAGAAGAAAATCAATAGCAAAAAGGAGAGGTGCAATAC
CTTTTTGTGGGAAATAAAGCTGGTTTAGATAATGTAGATAAAGAAAAAATAAATAAAATT
ATTAATGAAACCACTTAATCAAGTGAATTTTATAAAAGATAGTAAGTGAAAAGGGATTAA
TATGATGAAAGGATTAAAGAAATGAAATTAATAATAGAACAAACCAAATAAGATCATATT
AAGCTTTTGAAAGTCAAGAAAGAATGTGAAGATAAATTAGATTAAATTAAATAATTAGTT
CAGCTTGATAGGATTTGGGTTCATTTTGATATGGATATGTTTTATGTTGCTTGCGAACTT
AAGGATAGACCTCAATTAAAGTATTTTTAGCTTATAAAATAGTATTTACATTTTTATTTT
ATATTAATAGAGATTTGCCAGTGGCTGTTGGTGGTATGTCAATGATTAGTACAGCTAATT
ATGTTGCTAGAAAATTTGGTGTAAGATCTGCTATGCCTGGTTTCATTGCTAAAAAGCTAT
GTCCTTAATTAATTTTAATTCCTTGTAATTTTGAAAAATATAGAAAAGCAAGTGATTAAT
TCAAAAAAGTCTTATACTAATATGATCCTAATTTAGAAAGCATGGGGCTAGATGAGGCTA
ATCTGGATATAACAGATTATTTACAATAAAATAATATTAACTCAGATGCACAAATATACG
ATTTATGTCATTCTATTAGAAATCAGGTTTTTGAATCCACTGGAGGTCTAACTTGTTCTT
GTGGTATTGGACCAAACAAAATGCTAGCTAAAGTATGTTATAATTTAAGGAAAAAATTAT
TTATTGTTTGTTTTATAAATTTATTAGATCTGCTCAGATATGAATAAGCCCAATGGTTAG
TTTTAGTTGATAAATGATGAAGAAAAAATTAAGGATTTTATGAAAGATTTGCCTATTAGA
AAAATCCCTGGGATTGGGAATGTGACAGAATAAATCTTGAAAGGTATTGGAATAGAAAAA
TGTAGCTAAATCCTAGAAAGAGTTATTGATATAAAAATATGTTTTAAAGATCTTTCTTTT
GATCACTTAGTTTCTAGTGCTTTAGGTATAGGTCGTTCATGGCATGAAGAAGAGACGGAG
AAAAAAAGTCTTTCAGTAAGTAGAACTTTTTAAGCAATATCAACTATAGAGGAAATAAAC
GAAAAAATACATTAAATTTCTCAGCTTTTAGCTGAAGATGCTAAAGCAGAATAAAAAATT
GGAAAGCATTTGGCTGTTTCTTTTAAAAATGTAAAATTTTAAATGAGATCTAAAAACAGA
ATGCTTGATAAATATATTTAAGATAGTGAGTAAATTGAGAAAGTAGCTAAGGAATTAGTT
AAAGAATTATTACCTACTGAGCCTTTGAGGTTAATTGGAATTAGATTAAGTCAATTAGCT
GATGAAAATGAGCTAAAAAACCAAGGATTGAGCAAATATTTTGCTAAAAATGATAAAAGT
TTAAACAATTCAAGAATTTAATCTTCAAGTAAGAGTTCTAAAAAATCATTTGACAATAAA
AACCAAAATTCCTTGACAACTTATTTCAGTAATTAAGAAAAGAATAATTCAAGCTTAAAT
GTCTATTAAAATTAAAAAATAAAAGGACTTCTTAATGATAAAAATTTAGGAGACGTTTCT
AATCATTAAGAAGCATCTAATTTCAGTATAAATCCAAATAATTTATAAAAGTCACATTCA
AATAATTTAATTTAGCCCTCATTCCTAAGCTTAATAGATAAATATGAAAGTGAGGATCAA
GAGGATGAAAACGAAGATTCTTTTTAAGAAAATAACTCATGTAATAAGTTATAAAAATAA
ACAAAACATTAAGAGAGTATGTTGAATGAAATGAGTTATAGTAACAATTAATAGTAATTC
TAAATAAGTAAAGATAATAAGTAATATATAAATGAAAGTGATTGTGAAAGTAAAAATGAA
AGCGAAATAGACAACAGATAAAAATAAGAAGAATATGAAAATGATGATGATGACGATGAA
GATGGAGACGAAGACGACGATGATGATTTAATTTACCTAAAAAAAATTTTAAATAAAAAT
GTTTCAGAAAGACTTTCTTAGATATCTGAAAAAAAAAGTTAAGAGGAAAAAAGATAGTCA
TTATCAGATAAAAATAATTCTATGACACCTTAATTTATACAATAGAGTGGAGGAAGTTAA
AATTAAAGGAATGGCTCTATTTAACAAAAAGAAACATAAATGATACCTGAAACGGCTCAC
TAAAATAAACAATTTTAATCTTAGTAAATAAATTAGACTCAATACTATTAAAGAAAATCA
GAAAAAAGTGAAATTAGCTTCTAGTAATAATCAATATAATCACAAGAATATATGCATCTG
ATGATGGGTTCTGAAGAGTCCTCTAAGTTAGATATTAGAATAAATAGAAATATATTTCCT
AATAAAGTGTAAAATGAAAAAGAAAATAGCAATTCCATGTATGTATATGATGAAAATGCT
GAATATATGTCCTAACAATATATTGAGCATAATTCAGGATCATAAATGAATAATAAAAAG
AGAGTTCCTGCTGATGCACTTACTCCACAATAGGTTGAAGAGCAGTTAAAATTGAAAAAA
AAATTTATTCCTAGGCTATTTGAATGTCCAATATGCTTTTTATAACTCGATTCTTATGGT
AATGCTACATTTGTTAATAATCATATAACAAACTGTATGAAAGCCTAAGAGGAGAAATTT
AATAAGCTTGAATAAAATAATTCTTAATAAAATACATAGAAAGAAGAAAAAAAACCAGTT
TCTATATTAAATAATTATACCACAAAATAAGATACAAAGACAAAGTAAAGTGATAAAAAA
AATAGAAAGTCTGATTAAAAAAAATAGTAAAAAAACAGTTTTACATTAGATTCATTTGTA
ATAAAATAAAAAAATTGA

>TTHERM_00455309(protein)
MSQSQHNLEENQQQKGEVQYLFVGNKAGLDNVDKEKINKIINETTQSSEFYKRQQVKRDQ
YDERIKEMKLIIEQTKQDHIKLLKVKKECEDKLDQIKQLVQLDRIWVHFDMDMFYVACEL
KDRPQLKDLPVAVGGMSMISTANYVARKFGVRSAMPGFIAKKLCPQLILIPCNFEKYRKA
SDQFKKVLYQYDPNLESMGLDEANLDITDYLQQNNINSDAQIYDLCHSIRNQVFESTGGL
TCSCGIGPNKMLAKICSDMNKPNGQFQLINDEEKIKDFMKDLPIRKIPGIGNVTEQILKG
IGIEKCSQILERVIDIKICFKDLSFDHLVSSALGIGRSWHEEETEKKSLSVSRTFQAIST
IEEINEKIHQISQLLAEDAKAEQKIGKHLAVSFKNVKFQMRSKNRMLDKYIQDSEQIEKV
AKELVKELLPTEPLRLIGIRLSQLADENELKNQGLSKYFAKNDKSLNNSRIQSSSKSSKK
SFDNKNQNSLTTYFSNQEKNNSSLNVYQNQKIKGLLNDKNLGDVSNHQEASNFSINPNNL
QKSHSNNLIQPSFLSLIDKYESEDQEDENEDSFQENNSCNKLQKQTKHQESMLNEMSYSN
NQQQFQISKDNKQYINESDCESKNESEIDNRQKQEEYENDDDDDEDGDEDDDDDLIYLKK
ILNKNVSERLSQISEKKSQEEKRQSLSDKNNSMTPQFIQQSGGSQNQRNGSIQQKETQMI
PETAHQNKQFQSQQINQTQYYQRKSEKSEISFQQQSIQSQEYMHLMMGSEESSKLDIRIN
RNIFPNKVQNEKENSNSMYVYDENAEYMSQQYIEHNSGSQMNNKKRVPADALTPQQVEEQ
LKLKKKFIPRLFECPICFLQLDSYGNATFVNNHITNCMKAQEEKFNKLEQNNSQQNTQKE
EKKPVSILNNYTTKQDTKTKQSDKKNRKSDQKKQQKNSFTLDSFVIKQKN