Identifiers and Description

Gene Model Identifier

TTHERM_00463370

Standard Name

RRP61 (exosome component RRP6-1)

Aliases

PreTt25789 | 54.m00245 | 3823.m01156

Description

RRP61 3-prime-5-prime exonuclease

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• detection of virus (IEA) | GO:0009597
• protein import into peroxisome matrix, receptor recycling (IEA) | GO:0016562
• protein phosphorylation (IEA) | GO:0006468

Domains

No Data fetched for Domains

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10720.1	2.0000211193600847e-137
	Description: 3-5 exonuclease (1301 aa)
SGD	YOR001W	5.998760051700188e-30
	Description: RRP6 Nuclear exosome exonuclease component; has 3-5 exonuclease activity; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay
DictyBase	DDB_G0271572	3.0000451088882257e-25
	Description: exosc10 on chromosome: 2 position 601251 to 605014
WormBase	WBGene00000796	8.00344477495519e-22
	Description: locus:crn-3 status:Confirmed UniProt:G5EBX6 protein_id:CAA90108.1
Oxytricha	Contig14024.0.g55	9.997019043202629e-21
	Description: 3-5 exonuclease
Stentor Coeruleus	SteCoe_17151	0.00000000003775134544279098
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00463370(coding)
ATGAAAAATCCATTTGACAGCAATAAATATTTTATGAACGAGAATTTAAATTTGGCTTTT
GAAAATATTTCAAAGCCTCAGCTGTTATTTAACGATAGCTATTTTACTGTCAGTAACAAT
ACTTAGTTGTAGAACCAATCGCAAGGCTAGCTTGTTGAAAAAATTAAAGCAATATAAAAC
AATATCATTCCTTACAACGAAATAAGATTCTTTTAAAATCTAAGAAACATACAAGCATGT
TTTACTTTTGACTTCGATAAAGACCAATCCAAATCATTGTACATTAAAACAGACTAAGAA
TTTAACAGAATGTTAGAGCTCTTGAGAAATGCTGGAGTCATATGCTGGGATGTGCATTTC
AATACTTACAGAAGTTTCTATGGTTTTGTTTGCTTTCTAGAAATTAGTACAATTGATCAA
GATTATATCATAGATTGCTTAAGTTTGAGAAATGAAATACATAGATTAAAGGAAATCTTT
TTGGATAAGTAGATTGTTAAAATAACTTTGGATTTACAAGAAAAAATAAATTGGCTTTAC
AGAGATTTTGGAATCTTAAATATCGTTAATAGCATTGATTTAAGTCTTTATTTAAAAGAA
TTAAATTTGCCTTCAATAATTTCTTATTTGTGTGGGACACTGTTGAATTATCCTTTTCAA
AAAATACTGCAAAACTTTGATTATCGTAAAAGACCTCTTAGCTTAAATGAAATTAATTAT
TTAAGAGCTTTTAGTTACTTTCCTTTGAGGATACTATCTATCCTAACAAATAATATCCTT
TCTATTGAAAAAAGTAAACTTGAAGAGCTATTTAACAAGAGTTAATTGGCTTCTTGTTTG
AGCTTAAAGCAACTAGAAAATCTCCTTTAAGAGAACTTAATTGAGAAACACTTTGAAATG
TTCTGTATTGATAGAAATTACAACGAACAATAACAATATTTTTTGAGAAAAATTTTGAAG
TGGAGAATACAGAGAGCCAAATTAGAAGATGAAAGTGTTGAATATATCTTCCCTGCATGC
ATAATTGAGAAATTTATTTCAGTGTATCCAACTTCTTCATAATAAGTGTTAGATGAATTA
GTAAAATATCAGCAAGAAATAAACCTCTAGCACTATGAAACATTTTACTCTTTTTTTGAT
GAGAGAAGCTATCAAAATTACAAAGAAAAGAATAGATTTAAACATGATACAAAATAATAA
CAACAATAAACCTATTAAATATAGCAAACTTAGCAAATGCAATCACCAACTCCCAAAAAA
ATGCAATCTATCCAAGGAAGCACTAACTAAACTCCTTAATTGCAAAAAGAGAATTCGCAG
CAATAAAACTAAGAATCCCCTCCTCTTAGTCCAACTTCTTTATTAAAAGCAGTTAACTGG
GTGGTAAAAAATCCGAACCATGAAGGAACACCAGAAAAAAATTACAAAAAATTGATAAGC
AGATAAAGTTTATCACCTTCGATACTAAAATATTCCCCATAAAATGGAGTTGATTCGCCT
TAACATGATAATATCATGAAGGATTTATTATGTGTAATCAATGAGAGAAACTCTAAACAA
TCCTAAGTTAAATTTTAGCATTCTGTTTAGAGAGAACTGAGTAGAATAAATAACATGGAG
GACACAAATGATACTGAAGAAGAGCAGTAATAAAAGGAAGACACTTTCTAAATGAACCTA
TTAAATAAGTTATAATCAAAATAATACTACATAAAAAACTCTAAAGAAAACCTTCCAAAC
AATATTACAGATATCTTTGAATTAGCTAATCGTAAAAGAAAGAAAAATAAAGATAAAAAG
AGAAAGAAAGAAGAAAAGTCACCACAATTAACTGCTTAGGTAAATAAATAAATAAACACA
CACACATTTCAATAAACTCTTTTTTTTAATTTAATCATTTTATTTATTTGTTTTATTAAT
TTAATAATTTATTTTACATTAAATTCTAAAAGAAGGAACAAAAAGAAAAAGAAAAATTAA
ATATAGATAAGCTTCTAAAAGACTTGA

>TTHERM_00463370(gene)
ATGAAAAATCCATTTGACAGCAATAAATGTAAGATAGCAGTTTGATTTTTCCATTCAATT
TAACAAATAGTCTTAAACATAAATAACTTCATCAATTTTATAATATGGCAGATTTTATGA
ACGAGAATTTAAATTTGGCTTTTGAAAATATTTCAAAGCCTCAGCTGTTATTTAACGATA
GCTATTTTACTGTCAGTAACAATACTTAGTTGTAGAACCAATCGCAAGGCTAGCTTGTTG
AAAAAATTAAAGCAATATAAAACAATATCATTCCTTACAACGAAATAAGATTCTTTTAAA
ATCTAAGAAACATACAAGCATGTTTTACTTTTGACTTCGATAAAGACCAATCCAAATCAT
TGTACATTAAAACAGACTAAGAATTTAACAGAATGTTAGAGCTCGTAAAATCTTTTATTA
AAAAAATGGTTTTTATTTACAGATTTAAAATAATTTGAAAAGTTGAGAAATGCTGGAGTC
ATATGCTGGGATGTGCATTTCAATACTTACAGAAGTTTCTATGGTTTTGTTTGCTTTCTA
GAAGTACTTAAATTGTTGCCAATTAATCATAAATTTGAACATTTTTTATAAGATTCCTAA
TAAAATATTTACTTAGGATGATATATTTTTGTTTAAAATACATTTGATATCTTGATAGAT
AGATCTACAATACAAACAAATACTTGATTTTAATATTCATTTTTATCATTAAAGATTAGT
ACAATTGATCAAGATTATATCATAGATTGCTTAAGTTTGAGAAATGAAATACATAGATTA
AAGGAAATCTTTTTGGATAAGTAGATTGTTAAAATAACTTTGGATTTACAAGAAAAAATA
AATTGGCTTTACAGAGATTTTGGAATCTTAAATATCGTTAATAGCATTGATTTAAGTCTT
TATTTAAAAGAATTAAATTTGCCTTCAATAATTTCTTATTTGTGTGGGACACTGTTGAAT
TATCCTTTTCAAAAAATACTGCAAAACTTTGATTATCGTAAAAGACCTCTTAGCTTAAAT
GAAATTAATTATTTAAGAGCTTTTAGTTACTTTCCTTTGAGGATACTATCTATCCTAACA
AATAATATCCTTTCTATTGAAAAAAGTAAACTTGAAGAGCTATTTAACAAGAGTTAATTG
GCTTCTTGTTTGAGCTTAAAGCAACTAGAAAATCTCCTTTAAGAGAACTTAATTGAGAAA
CACTTTGAAATGTTCTGTATTGATAGAAATTACAACGAACAATAACAATATTTTTTGAGA
AAAATTTTGAAGTGGAGAATACAGAGAGCCAAATTAGAAGATGAAAGTGTTGAATATATC
TTCCCTGCATGCATAATTGAGAAATTTATTTCAGTGTATCCAACTTCTTCATAATAAGTG
TTAGATGAATTAGTAAAATATCAGCAAGAAATAAACCTCTAGCACTATGAAACATTTTAC
TCTTTTTTTGATGAGAGAAGCTATCAAAATTACAAAGAAAAGAATAGATTTAAACATGAT
ACAAAATAATAACAACAATAAACCTATTAAATATAGCAAACTTAGCAAATGCAATCACCA
ACTCCCAAAAAAATGCAATCTATCCAAGGAAGCACTAACTAAACTCCTTAATTGCAAAAA
GAGAATTCGCAGCAATAAAACTAAGAATCCCCTCCTCTTAGTCCAACTTCTTTATTAAAA
GCAGTTAACTGGGTGGTAAAAAATCCGAACCATGAAGGAACACCAGAAAAAAATTACAAA
AAATTGATAAGCAGATAAAGTTTATCACCTTCGATACTAAAATATTCCCCATAAAATGGA
GTTGATTCGCCTTAACATGATGTAAAAAATTTATTTGAATAAGTTTAAGATTGAAAAAGT
TTTTTTATTAAAAGAATATCATGAAGGATTTATTATGTGTAATCAATGAGAGAAACTCTA
AACAATCCTAAGTTAAATTTTAGCATTCTGTTTAGAGAGAACTGAGTAGAATAAATAACA
TGGAGGACACAAATGATACTGAAGAAGAGCAGTAATAAAAGGAAGACACTTTCTAAATGA
ACCTATTAAATAAGTTATAATCAAAATAATACTACATAAAAAACTCTAAAGAAAACCTTC
CAAACAATATTACAGATATCTTTGAATTAGCTAATCGTAAAAGAAAGAAAAATAAAGATA
AAAAGAGAAAGAAAGAAGAAAAGTCACCACAATTAACTGCTTAGGTAAATAAATAAATAA
ACACACACACATTTCAATAAACTCTTTTTTTTAATTTAATCATTTTATTTATTTGTTTTA
TTAATTTAATAATTTATTTTACATTAAATTCTAAAAGAAGGAACAAAAAGAAAAAGAAAA
ATTAAATATAGATAAGCTTCTAAAAGACTTGA

>TTHERM_00463370(protein)
MKNPFDSNKYFMNENLNLAFENISKPQLLFNDSYFTVSNNTQLQNQSQGQLVEKIKAIQN
NIIPYNEIRFFQNLRNIQACFTFDFDKDQSKSLYIKTDQEFNRMLELLRNAGVICWDVHF
NTYRSFYGFVCFLEISTIDQDYIIDCLSLRNEIHRLKEIFLDKQIVKITLDLQEKINWLY
RDFGILNIVNSIDLSLYLKELNLPSIISYLCGTLLNYPFQKILQNFDYRKRPLSLNEINY
LRAFSYFPLRILSILTNNILSIEKSKLEELFNKSQLASCLSLKQLENLLQENLIEKHFEM
FCIDRNYNEQQQYFLRKILKWRIQRAKLEDESVEYIFPACIIEKFISVYPTSSQQVLDEL
VKYQQEINLQHYETFYSFFDERSYQNYKEKNRFKHDTKQQQQQTYQIQQTQQMQSPTPKK
MQSIQGSTNQTPQLQKENSQQQNQESPPLSPTSLLKAVNWVVKNPNHEGTPEKNYKKLIS
RQSLSPSILKYSPQNGVDSPQHDNIMKDLLCVINERNSKQSQVKFQHSVQRELSRINNME
DTNDTEEEQQQKEDTFQMNLLNKLQSKQYYIKNSKENLPNNITDIFELANRKRKKNKDKK
RKKEEKSPQLTAQVNKQINTHTFQQTLFFNLIILFICFINLIIYFTLNSKRRNKKKKKNQ
IQISFQKT