Identifiers and Description

Gene Model Identifier

TTHERM_00467760

Standard Name

RAB6A

Aliases

PreTt18678 | 55.m00233 | 3710.m00082

Description

RAB6A Rab-family small GTPase; Rab VI family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF01926 ) 50S ribosome-binding GTPase
• ( PF03029 ) Conserved hypothetical ATP binding protein
• ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
• ( TIGR00157 ) ribosome small subunit-dependent GTPase A
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_15717.1	2.000893364583308e-148
	Description: Ras family protein (229 aa)
Tetrahymena borealis	EI9_19736.1	2.000893364583308e-148
	Description: hypothetical protein (420 aa)
DictyBase	DDB_G0268068	5.9988196117913e-83
	Description: rab6 on chromosome: 1 position 1398472 to 1399280
WormBase	WBGene00004270	3.0005855096961235e-80
	Description: locus:rab-6.2 Ras-related protein Rab-6.2 status:Confirmed UniProt:Q22782 protein_id:CCD74453.1
Tetrahymena borealis	EI9_15911.1	3.0005855096961235e-80
	Description: hypothetical protein (689 aa)
Oxytricha	Contig5831.0.g6	9.99711830094262e-74
	Description: Ras family
SGD	YLR262C	9.004385969422137e-73
	Description: YPT6 Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6
Stentor Coeruleus	SteCoe_6177	1.8048513878454153e-35
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00467760(coding)
ATGAACTCAGAAACAAAAGGATCAATAGCTACTCCCTTGTCAAAATATAAATTAGTATTT
TTAGGAGATTAGGGTGTAGGAAAGACATCAATTATTAACAGATTTATGTTTGACACATTT
GATGGAAAAGATCACCCTACAGTTGGTATTGATTTTATCTCCAAGACCCTCTATTATGAA
GATAGAACTATAAGATTACAACTATGGGATACAGCTGGATAAGAAAGATTTAGAAGTTTA
ATTCCTTCATATATTAGAGATAGCGCTGTTGCAGTTGTCTGTTACGATATTACAAACAAA
GTTTCATTCGATAATGTTGCCAAATGGATAGAAGATGTTAGGGCAGAAAGAGGACACGAT
GTCATTATTTGCTTAGTTGGTAGTAAAAATGATTTAGTTGACAAAAGGGTAGTATAAACA
ACAGATGGTTAAGTTAAAGCAAAAGAATTAGATGTCAAATTTTTTGAAGTTAGTGCTCTC
ACTGGTTAAAATGTATAATAACTATTTAGATCTATTGCTAATATGCTTCCAGGAGCAGAA
GTTAGCTAGCTTGCTCAGCTTTAAGGAGGAATGAACAAAAACGTAAATAATAACTAAGAA
GAAACAAAATAAAATTTTCAACTGGACTAAAACCAAACAGAAGAGCAAAATAAAGAAAAA
AAAGAAAAAAAATAAGGCGGCTGCTGTTGA

>TTHERM_00467760(gene)
ATGAACTCAGAAACAAAAGGATCAATAGCTACTCCCTTGTCAAAATATAAATTAGTATTT
TTAGGAGATTAGGGTGTAGGAAAGACATCAATTATTAACAGATTTATGTTTGACACATTT
GATGGAAAAGATCACGTAAATAATTCTTCTTCTTCTTTAAATGCTCTATAAAACCAATCC
ATAATTTGTAAATAAAAATGATCAACTGTTTTTAAAAATTTAAATAAAAACACAACTACA
TTAATGAAATATATTAAAGAGAATTAAGGAGAAATAGATTTAAAAATATAAATCATTAAA
TTATCTAAAAATAATTTGTTATTATATATTTGGGATTCGCTTAAATCTAGCTCATTTTAA
CTCCTTAATGAAATTATTTATTATAAATCATAAATATAAAAAAACAATCATCATATATAA
AGAATATTTAAATCTAAGAGTATATTTATTATAGCCACTTGAAACTTAGAATTATGGATT
AACTTTAAATAAAATTGAATATCTGAGTTAAATTAAAATAATTATTTTTAATATTAGCCT
ACAGTTGGTATTGATTTTATCTCCAAGACCCTCTATTATGAAGATAGAACTATAAGATTA
CAACTATGGGATACAGCTGGATAAGAAAGATTTAGAAGTTTAATTCCTTCATATATTAGA
GATAGCGCTGTTGCAGTTGTCTGTTACGATATTACAAGTAATTAGATAGCCTCATTCGAT
TTATATTAATATTTATTTTTCCTCCGACTAAAATAGACAAAGTTTCATTCGATAATGTTG
CCAAATGGATAGAAGATGTTAGGGCAGAAAGAGGACACGATGTCATTATTTGCTTAGTTG
GTAGTAAAAATGATTTAGTTGACAAAAGGTAAATATTATTAATTAAAAGTCATTCTTTAA
ACTCAATATGCTTTTTTGATTCAACTATTTAGGGTAGTATAAACAACAGATGGTTAAGTT
AAAGCAAAAGAATTAGATGTCAAATTTTTTGAAGTTAGTGCTCTCACTGGTTAAAATGTA
TAATAACTATTTAGATCTATTGCTAATATGCTTCCAGGAGCAGAAGTTAGCTAGCTTGCT
CAGCTTTAAGGAGGAATGAACAAAAACGTAAATAATAACTAAGGTATTTTATTTTAAAAG
AAAATTAACAAATAAATAAATAAACGAACAAAGTATATTTAAAAATATTAATTTTTATTT
TAATATCTAATAAACAGAAGAAACAAAATAAAATTTTCAACTGGACTAAAACCAAACAGA
AGAGCAAAATAAAGAAAAAAAAGAAAAAAAATAAGGCGGCTGCTGTTGA

>TTHERM_00467760(protein)
MNSETKGSIATPLSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYE
DRTIRLQLWDTAGQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHD
VIICLVGSKNDLVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANMLPGAE
VSQLAQLQGGMNKNVNNNQEETKQNFQLDQNQTEEQNKEKKEKKQGGCC