Identifiers and Description

Gene Model Identifier

TTHERM_00469100

Standard Name

RPT4 (26S proteasome regulatory subunit T4)

Aliases

PreTt18712 | 55.m00267 | 3710.m00115

Description

RPT4 26S proteasome regulatory ATPase subunit 10B

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

Gene Ontology Annotations

Cellular Component

Domains

  • ( PF00004 ) ATPase, AAA family
  • ( PF00158 ) Sigma-54 interaction domain
  • ( PF07724 ) ATPase family associated with various
  • ( PF07726 ) ATPase family associated with various
  • ( PF07728 ) ATPase family associated with various
  • ( TIGR00382 ) ATP-dependent Clp protease, ATP-binding subunit
  • ( TIGR00635 ) Holliday junction DNA helicase RuvB
  • ( TIGR01241 ) ATP-dependent metallopeptidase HflB
  • ( TIGR01242 ) 26S proteasome subunit P45 family
  • ( TIGR01552 ) prevent-host-death family protein
  • ( TIGR02881 ) stage V sporulation protein K
  • ( TIGR02902 ) ATP-dependent protease LonB

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Stentor Coeruleus SteCoe_35537 0
Description: None
WormBase WBGene00004504 9.997093137033517e-262
Description: locus:rpt-4 Probable 26S protease regulatory subunit 10B status:Confirmed UniProt:O17071 protein_id:CCD62358.1
Tetrahymena borealis EI9_15684.1 9.997093137033517e-262
Description: 26S proteasome subunit P45 family protein (391 aa)
Oxytricha Contig10954.0.g62 9.997093137033517e-262
Description: ATPase family associated with various cellular activities (AAA)
SGD YOR259C 8.000959403653794e-177
Description: RPT4 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in degradation of ubiquitinated substrates; contributes preferentially to ERAD; required for spindle pole body duplication; mainly nuclear localization
DictyBase DDB_G0284517 4.997692805068281e-176
Description: psmC6 on chromosome: 4 position 2090141 to 2091556

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences 

>TTHERM_00469100(coding)
ATGGCTTCAACTGATAATCCAGTAGTTTAAAATTACCTTAGAGTTAAGCGTGAACATGAG
AAGATGGAAATCGATTTAAAAAAGCAAAGATTCAACTTACGTGACTTGAATAAGCAATTA
GATAAAACTGATGATTAGCTTAAGGCTATCTAAAGTGTAGGATAACCAATTGGTGAAGTT
TTAAAGCAAATTAATGAAGAAAAATACATTGTTAAATCATCAAGTGGCCCTAGATACGTA
GTTGGTGTTAAATCTAAAATTAATAGAGAAAAGCTTGTTATTGGAGCTAGAGTAGCATTA
GATTAGAATACTTATACTATTGTTAGAATCTTGCCTAGAGAAGTAGATCCTATGGTATAT
CATATGTTACATGAAGATCCAGGTAAAGTTACCTTTGACGATGTCGGTGGTTTAGATGAC
TAAATTAGAACTCTTAGAGAAACTATTGAGTTACCAATCACAAATCCAGAATTGTTTAGA
AGAGTAGGTGTTAAGCCTCCTAAAGGTTGTTTGATGTATGGACCTCCTGGTACTGGTAAA
ACTTTAATTGCAAGAGCTCTTGCCAATAATGTTGATGCAAAATTCTTAAAGGTTGTAGCA
TCAGGTATAGTAGATAAATATATTGGTGAATCTGCAAGAGTTATTCGTGAAATGTTCGCT
TTTGCAAGAGAGCACGAACCATGCATTATATTTATGGATGAAATCGATGCTATTGGTGGT
CGTAGATTTTCAGAAGGTTCTTCTGCTGATAGAGAAATCCAAAGAACTTTGATGGAACTT
CTAAATCAAATTGATGGTTTTGATGATTTAAAGAGAGTCAAGATTGTTATGGCCACAAAT
AGACCCGATGTGCTTGATCCTGCACTTATGAGACCAGGTCGTTTAGATAGAAAAGTAGAA
ATTCCCTTACCTAATGAATAGGCCCGTGCAAAAATTTTAGGCATTCATATGAAAACTATT
ACTATATTAGGTGAAGTAACTTATATTGAAGAACTTGCCAAGCTTACAGAAGATTTCAAT
GGAGCTGATTTACGTAACGTATGTACAGAAGCAGGTATGTTTGCTATTAGAGCTGGTAGA
GATTATGTCATTTAAGAAGATTTCTTCAAGGCTGCTAGAAAGATAAAAGAATCTAAAAAA
TTAGAATCTAAGTTAGATTACAGCAAAGTTTGA


>TTHERM_00469100(gene)
ATGGCTTCAACTGATAATCCAGTAGTTTAAAATTACCTTAGAGTTAAGCGTGAACATGAG
AAGATGGAAATCGATTTAAAAAAGCGTAATAATTCTAATTTTATTTATTTAAGTTCAAAG
GCACTTTATTCAATCATTACATATTAAGATTGCTTAATTAATCAATATTGATTAAGACTT
CAAATGAGTGATTTATTAAATATAAAAAATTATTTTTATAAATGAATATAGAAAGATTCA
ACTTACGTGACTTGAATAAGCAATTAGATAAAACTGATGATTAGCTTAAGGCTATCTAAA
GTGTAGGATAACCAATTGGTGAAGTTTTAAAGCAAATTAATGAAGAAAAATGTAAATCTT
TATTAGTTTTGTTTCTTTATGGCAGATCAAAAAAGGTTATGTGACAATAATTTTAAACAA
ATATGAGTGACTGGCCTTTTTTCCTTCATTTTGATGAGCTATTATCCTTAAAATTATATA
AACATATTATTTTATTTATAGACATTGTTAAATCATCAAGTGGCCCTAGATACGTAGTTG
GTGTTAAATCTAAAATTAATAGAGAAAAGCTTGTTATTGGTAAAGAATCAATTTTTTGAA
TTTAAAATATTTTGTTAAGTTAGTTGATGGCTCCTTATTAACAAATATTATTGTTGTTTA
TTATTATAGGAGCTAGAGTAGCATTAGATTAGAATACTTATACTATTGTTAGAATCTTGC
CTAGAGAAGTAGATCCTATGGTATATCATATGTTACATGAAGATCCAGGTAAAGTTACCT
TTGACGATGTCGGTGGTTTAGATGACTAAATTAGAACTCTTAGAGAAGTAATTTATATAT
TTATTTCTATTAATAGAGTTTTTAGTATGCCTCATTTAATAATAAATAAATAATTAAATA
GTTTAACCATTTTAAGCTTTAGCATTTTATTACACACTTACTTAATTAGGAAATAAATAA
CTCCAAACAAATTTTAATGGAAGAAGAAAAATAGATTATTTATTTATAATTAGAATGCTT
ATTAAAATTTCAATAAAATAATAATAATTAAAATTTATTAATTAGACTATTGAGTTACCA
ATCACAAATCCAGAATTGTTTAGAAGAGTAGGTGTTAAGCCTCCTAAAGTAATATTTAGT
TAAAATAAGTTATGAGTCCTAATTAAATTATTCTTATTAGGGTTGTTTGATGTATGGACC
TCCTGGTACTGGTAAAACTTTAATTGCAAGAGCTCTTGCCAATAATGTTGATGCAAAATT
CTTAAAGGTTGTAGCATCAGGTATAGTAGATAAATATATTGGTGAATCTGCAAGAGTTAT
TCGTGAAATGTTCGCTTTTGCAAGAGAGCACGAACCATGCATTATATTTATGGATGAAAT
CGATGCTATTGGTGGTCGTAGATTTTCAGAAGGTTCTTCTGCTGATAGAGAAATCCAAAG
AACTTTGATGGAAGTAAAAAAAAATTCATTGTTTAAAATTAGAAATTTAATTTAATAAAA
TTAATTTAAAAAAATAGCTTCTAAATCAAATTGATGGTTTTGATGATTTAAAGAGAGTCA
AGATTGTTATGGCCACAAATAGACCCGATGTGCTTGATCCTGCACTTATGAGACCAGGTC
GTTTAGATAGAAAAGTAGAAATTCCCTTACCTAATGAATAGGCCCGTGCAAAAATTTTAG
GCATTCATATGAAAACTATTACTATATTAGGTGAAGTAACTTATATTGAAGAACTTGCCA
AGCTTACAGAAGATTTCAATGGAGCTGATTTACGTAACGTATGTACAGAAGCAGGTAAAA
TAAAAATAATAAATGATAAACCTAGTTTAAAATGAATATTATTGAAATAAAAATATAGGT
ATGTTTGCTATTAGAGCTGGTAGAGATTATGTCATTTAAGAAGATTTCTTCAAGGCTGCT
AGAAAGATAAAAGAATCTAAAAAATTAGAATCTAAGTTAGATTACAGCAAAGTTTGA


>TTHERM_00469100(protein)
MASTDNPVVQNYLRVKREHEKMEIDLKKQRFNLRDLNKQLDKTDDQLKAIQSVGQPIGEV
LKQINEEKYIVKSSSGPRYVVGVKSKINREKLVIGARVALDQNTYTIVRILPREVDPMVY
HMLHEDPGKVTFDDVGGLDDQIRTLRETIELPITNPELFRRVGVKPPKGCLMYGPPGTGK
TLIARALANNVDAKFLKVVASGIVDKYIGESARVIREMFAFAREHEPCIIFMDEIDAIGG
RRFSEGSSADREIQRTLMELLNQIDGFDDLKRVKIVMATNRPDVLDPALMRPGRLDRKVE
IPLPNEQARAKILGIHMKTITILGEVTYIEELAKLTEDFNGADLRNVCTEAGMFAIRAGR
DYVIQEDFFKAARKIKESKKLESKLDYSKV