Identifiers and Description

Gene Model Identifier

TTHERM_00470530

Standard Name

NMD3 (nonsense-mediated mRNA decay protein 3)

Aliases

PreTt22467 | 56.m00171 | 3686.m00014

Description

NMD3 60S ribosomal export protein NMD3 putative; NMD3 family protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF04702 ) Vicilin N terminal region
• ( PF04981 ) NMD3 family

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_11389.1	9.997093137033517e-262
	Description: NMD3 family protein (628 aa)
WormBase	WBGene00003821	9.997093137033517e-262
	Description: locus:nst-1 Guanine nucleotide-binding protein-like 3 homolog status:Confirmed UniProt:Q21086 protein_id:CAA88860.1
Oxytricha	Contig20934.0.g47	4.998599334973554e-137
	Description: NMD3 family
DictyBase	DDB_G0271306	4.000347951747671e-122
	Description: nmd3 on chromosome: 2 position 129822 to 131608
SGD	YHR170W	1.0000409741368237e-118
	Description: NMD3 Protein involved in nuclear export of the large ribosomal subunit; acts as a Crm1p-dependent adapter protein for export of nascent ribosomal subunits through the nuclear pore complex
WormBase	WBGene00012030	4.0002634815779907e-110
	Description: status:Confirmed UniProt:Q22792 protein_id:CAA96689.2
WormBase	WBGene00000485	4.0002634815779907e-110
	Description: locus:che-3 Cytoplasmic dynein 2 heavy chain 1 status:Partially_confirmed UniProt:Q19542 protein_id:CAA99830.2
Stentor Coeruleus	SteCoe_14944	3.817497188671175e-54
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00470530(coding)
ATGTAGGGAGCCTCATAGTTATTAAACATTAGTGCAAGATCAAATGGATCTCAATTTATG
AGCAGCACTTTCTAAAGAGTCACCGCAAACATCCTCTGTTGTATGTGTGGTGTCTCCTTT
AATGCTGCCTAAACAAGAACAAATATGTGTGTTAATTGTTTAACCAATTAACAAGATATT
ACTACAGGAATTACTAAATAGGGAGTAGTTAATTTTTGTCGTATGTGCAGACGTTACAAC
AAACCACCTTGGGTTTATTGTGAACGTGAAAGCAAAGAAATGCTCTCTCTTTGTCTTAAG
AAGATTAAGGGTCTTGAGAAGGTTAAACTCATAGACAGTGCTTTCTTGTATACTGAACCC
CATTCTCGTCGTATTCGTATCCGTCTTACTATCTAAAAAGAAGTCATGAATAATACTTCT
ATCTAATAAAATTTTGTCGTTGAATTCGTAGAACACTACGGCTAGTGTGATGACTGTAAA
AAGGAATTTACTCCTCACACATGGGGTGCTTAAGTCTAACTTCGTTAAAAAGTTGAACAC
AAAAAGACTTTCTTCTTCTTAGAATAAGTTATGTTAAAGCATAATGCTCACGATAAAGTT
TTGAAAGTAGAAGAAAAGGATGATGGTTTAGATTTCTTCTATAAAAATAAAATGTAAGCA
AATCGTTTGGTAGACTTCATATAAAGTGTTATCCCCTGCAAGATTAAGCCTTCCAAACAG
CTTATCGGACTTGACGATCGTAACAATATTTACAATTACAAATATTCTTGGTCTGTTGAA
ATTCCTAAAATATGCAAGGATGACTTGTGTGTTTTCCCTCCTAGATTATGCAAAGAGTTA
GGAGGTATCAGTCCTCTTGTATTATGTGTTAAAGTTAGCAATATGCTCCATTTCGTAGAT
ACTCACACTCATAAGCGTATTGACATCACTGCTGAAAGATACTTCCATTATGAAAACGAC
ATTATTGTTCTCTCCTTAAAGAAAAACTCTACTGAATTTATGGTTACTGGTATTGAAAAA
ATTGAAAATGAATTTACTAATCCCTAAAGCTTGAATGAATCCTCTGTTAACACCAGTTAC
ATGTCTTCAATCAGCAACGTTTACTAAGATAAACTAGCTCACTTAACCCTCATGCGTACT
AGCGATTGGAAAGAATTCCATGCTAAAGCACATCTTGGTGAAATTATTAAGGAAGGATGC
ATGGTTTTGGGTTATGATTTGACAACATTGAACTACTCTGAAGACCTTGAAGTTCTTAAA
AATGCTCCTGAAATTATTATTGTCAAACGTATTTATGATAAGGAAAATAAAGCCCGTATT
TGGAAGCTTAAGCGTTTATAGATGGATGGTGTTATGGTTGAAGAAAATACCGAAGAAGCT
AATAAGAAGGGCAAGAAAAAAATAGTCTCAGACTAGGATAAAGAATAAGATTTTGAAGAG
TTTATGGATGACATAGAACGTGATCCTCTTATGCGTGAAAAAATTAATTTATATAAGGAT
GATGAAGGAATTAAAAAGCTCTCAGATAAGGAACTTGCAAGAAAGCAATAACTTTCCAGA
CGTCTTAAAAGAAAAATGCTTAAAGTTATTAACGTTAAAGTTAAAGATCCCTAAGAAATT
ATCAGATAACAAGAAGAAGAATTATAAGAGAAGCTTCGTATCGCAGAAGAAAAGAGGGCT
GAAAAGGAAGCTAAAAAGAAAGAAAAGGAAGACGAAGAAGACTACAACCGTAACGAAGTT
AAGTTGGCTGAATTATTAGAAGATCTTAATCTTGAAGAAGATAAAGGTGAAGAAGATGGA
GACAAAGTCTTTGATGAAGACAATTTCATTGACGAATTTATTAAAAGACTTGATCATATT
AAAATTGAAAAGTAATGA

>TTHERM_00470530(gene)
ATGTAGGGAGCCTCATAGTTATTAAACATTAGTGCAAGATCAAATGGATCTCAATTTATG
AGCAGCACTTTCTAAAGAGTCACCGCAAACATCCTCTGTTGTATGTGTGGTGTCTCCTTT
AATGCTGCCTAAACAAGAACAAATATGTGTGTTAATTGTTTAACCAATTAACAAGATATT
ACTACAGGAATTACTAAATAGGGAGTAGTTAATTTTTGTCGTATGTGCAGACGTTACAAC
AAACCACCTTGGGTTTATTGTGAACGTGAAAGCAAAGAAATGCTCTCTCTTTGTCTTAAG
AAGATTAAGGGTCTTGAGAAGGTTAAACTCATAGACAGTGCTTTCTTGTATACTGAACCC
CATTCTCGTCGTATTCGTATCCGTCTTACTATCTAAAAAGAAGTCATGAATAATACTTCT
ATCTAATAAAATTTTGTCGTTGAATTCGTAGAACACTACGGCTAGTGTGATGACTGTAAA
AAGGAATTTACTCCTCACACATGGGGTGCTTAAGTCTAACTTCGTTAAAAAGTTGAACAC
AAAAAGACTTTCTTCTTCTTAGAATAAGTTATGTTAAAGCATAATGCTCACGATAAAGTT
TTGAAAGTAGAAGAAAAGGATGATGGTTTAGATTTCTTCTATAAAAATAAAATGTAAGCA
AATCGTTTGGTAGACTTCATATAAAGTGTTATCCCCTGCAAGATTAAGCCTTCCAAACAG
CTTATCGGACTTGACGATCGTAACAATATTTACAATTACAAATATTCTTGGTCTGTTGAA
ATTCCTAAAATATGCAAGGATGACTTGTGTGTTTTCCCTCCTAGATTATGCAAAGAGTTA
GGAGGTATCAGTCCTCTTGTATTATGTGTTAAAGTTAGCAATATGCTCCATTTCGTAGAT
ACTCACACTCATAAGCGTATTGACATCACTGCTGAAAGATACTTCCATTATGAAAACGAC
ATTATTGTTCTCTCCTTAAAGAAAAACTCTACTGAATTTATGGTTACTGGTATTGAAAAA
ATTGAAAATGAATTTACTAATCCCTAAAGCTTGAATGAATCCTCTGTTAACACCAGTTAC
ATGTCTTCAATCAGCAACGTTTACTAAGATAAACTAGCTCACTTAACCCTCATGCGTACT
AGCGATTGGAAAGAATTCCATGCTAAAGCACATCTTGGTGAAATTATTAAGGAAGGATGC
ATGGTTTTGGGTTATGATTTGACAACATTGAACTACTCTGAAGACCTTGAAGTTCTTAAA
AATGCTCCTGAAATTATTATTGTCAAACGTATTTATGATAAGGAAAATAAAGCCCGTATT
TGGAAGCTTAAGCGTTTATAGATGGATGGTGTTATGGTTGAAGAAAATACCGAAGAAGCT
AATAAGAAGGGCAAGAAAAAAATAGTCTCAGACTAGGATAAAGAATAAGATTTTGAAGAG
TTTATGGATGACATAGAACGTGATCCTCTTATGCGTGAAAAAATTAATTTATATAAGGAT
GATGAAGGAATTAAAAAGCTCTCAGATAAGGAACTTGCAAGAAAGCAATAACTTTCCAGA
CGTCTTAAAAGAAAAATGCTTAAAGTTATTAACGTTAAAGTTAAAGATCCCTAAGAAATT
ATCAGATAACAAGAAGAAGAATTATAAGAGAAGCTTCGTATCGCAGAAGAAAAGAGGGCT
GAAAAGGAAGCTAAAAAGAAAGAAAAGGAAGACGAAGAAGACTACAACCGTAACGAAGTT
AAGTTGGCTGAATTATTAGAAGATCTTAATCTTGAAGAAGATAAAGGTGAAGAAGATGGA
GACAAAGTCTTTGATGAAGACAATTTCATTGACGAATTTATTAAAAGACTTGATCATATT
AAAATTGAAAAGTAATGA

>TTHERM_00470530(protein)
MQGASQLLNISARSNGSQFMSSTFQRVTANILCCMCGVSFNAAQTRTNMCVNCLTNQQDI
TTGITKQGVVNFCRMCRRYNKPPWVYCERESKEMLSLCLKKIKGLEKVKLIDSAFLYTEP
HSRRIRIRLTIQKEVMNNTSIQQNFVVEFVEHYGQCDDCKKEFTPHTWGAQVQLRQKVEH
KKTFFFLEQVMLKHNAHDKVLKVEEKDDGLDFFYKNKMQANRLVDFIQSVIPCKIKPSKQ
LIGLDDRNNIYNYKYSWSVEIPKICKDDLCVFPPRLCKELGGISPLVLCVKVSNMLHFVD
THTHKRIDITAERYFHYENDIIVLSLKKNSTEFMVTGIEKIENEFTNPQSLNESSVNTSY
MSSISNVYQDKLAHLTLMRTSDWKEFHAKAHLGEIIKEGCMVLGYDLTTLNYSEDLEVLK
NAPEIIIVKRIYDKENKARIWKLKRLQMDGVMVEENTEEANKKGKKKIVSDQDKEQDFEE
FMDDIERDPLMREKINLYKDDEGIKKLSDKELARKQQLSRRLKRKMLKVINVKVKDPQEI
IRQQEEELQEKLRIAEEKRAEKEAKKKEKEDEEDYNRNEVKLAELLEDLNLEEDKGEEDG
DKVFDEDNFIDEFIKRLDHIKIEKQ