Identifiers and Description

Gene Model Identifier

TTHERM_00470810

Standard Name

RAB7 (RAB GTPase 7)

Aliases

56.m00199 | PreTt22495 | 3686.m00042

Description

RAB7 small guanosine triphosphatase family (GTPase)-like Ras family protein; Putative Rab GTPase; putative member of the evolutionarily conserved Rab ramily which functions in regulation of membrane trafficking

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00009 ) Elongation factor Tu GTP binding
  • ( PF00025 ) ADP-ribosylation factor family
  • ( PF00071 ) Ras family
  • ( PF01926 ) GTPase of unknown function
  • ( PF03029 ) Conserved hypothetical ATP binding protein
  • ( PF08477 ) Miro-like protein
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( TIGR02528 ) ethanolamine utilization protein, EutP

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_11358.1 5.001524836186341e-138
Description: Ras family protein (210 aa)
WormBase WBGene00004271 4.9994004612166366e-86
Description: locus:rab-7 status:Confirmed UniProt:Q23146 protein_id:CAA91357.1
DictyBase DDB_G0269236 4.001073573587828e-83
Description: rab7A on chromosome: 1 position 2627248 to 2628493
Oxytricha Contig15386.0.g21 1.0004671766404936e-76
Description: Ras family
SGD YML001W 6.99980278126514e-75
Description: YPT7 Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion, similar to mammalian Rab7
Stentor Coeruleus SteCoe_33141 5.5210822770285325e-42
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:31964712: Sparvoli D, Zoltner M, Cheng CY, Field MC, Turkewitz AP (2020) Diversification of CORVET tethers facilitates transport complexity in . Journal of cell science 133:
  2. Ref:29478853: Sparvoli D, Richardson E, Osakada H, Lan X, Iwamoto M, Bowman GR, Kontur C, Bourland WA, Lynn DH, Pritchard JK, Haraguchi T, Dacks JB, Turkewitz AP (2018) Remodeling the Specificity of an Endosomal CORVET Tether Underlies Formation of Regulated Secretory Vesicles in the Ciliate Tetrahymena thermophila. Current biology : CB 28(5):697-710.e13
  3. Ref:11387043: Stenmark H and Olkkonen VM (2001) The Rab GTPase family. Genome Biol 2(5):REVIEWS3007
  4. Ref:17821280: Harrison JA, Fowler EH (1945) AN ANTIGEN-ANTIBODY REACTION WITH TETRAHYMENA WHICH RESULTS IN DYSTOMY. Science (New York, N.Y.) 102(2638):65-6

Sequences

>TTHERM_00470810(coding)
ATGAGCACAAATAAAAGAAAGCAACTCTACAAGATTATCATCTTAGGTGATTCTGGGTAC
GTCAACTAGCGTTTTACTCAACAATATAGAGCTACAGTTGGTGCTGATTTCATGGCTAAG
GAAGTCACTATTGATGATCGTATGGTTACATTACAAATTTGGGATACCGCTGGTCAAGAA
CGTTTCTAATCCCTCGGTGGTGCTTTCTATAGAGGTGCTGACTGCTGTGTTTTGGTCTAT
GATATTACAAATAAGAAGACCTTTGAAAACTTAGAAAGTTGGAAAGAAGAATTTAAGCAA
CAAGGTTGCCCTAAAGATCCTGACACTTTCCCATTTGTTGTTATTGGAAATAAAAGCGAT
AAAGCATCAGAAAGAAAAGTTGAAACTGAGTTTGCTCAATAATGGTGCAAATCTAATGGA
GACATTAAGCACTTCGAAACATCTGCCAAGGATGATACTAATGTTAATGCTGCTTTTATG
GCTATTGCTAAGGCTGCCTCCTCTTAATTCTAAGAAGATGCCATCTTCTTCCCACCAAAG
CCTGTTGTTTTGTAAACTGATAAGGCCAAAAAGAAAGAAAAAAAGGATGACTGCCCTTGT
TGA


>TTHERM_00470810(gene)
ATGAGCACAAATAAAAGAAAGCAACTCTACAAGATTATCATCTTAGGTGATTCTGGGTAA
ATGATCCATACTAATTCTTAATTGCAGCGATTGACATTTTTAATTATATTTCAGGATTAT
GTGCTATTTTATCAGCATAATAAGCTTGAAAATTGTGATTGTGCAGAAATTCATCTATTA
ATTTTTTTAACCCATTTTTATTAAAATAAATAGTGTAGGAAAGACTTCTCTTATGAACCA
GTAAAATGTTTTTACAGTTATTAGCATTAAAATAAATAGTTGGGCTGTTAAATAGTCTAA
AGATCAGAATAGCAGAAATTTATTTTTTTTTTTGTTTTATTACAGGTACGTCAACTAGCG
TTTTACTCAACAATATAGAGCTACAGTTGGTGCTGATTTCATGGCTAAGGAAGTCACTAT
TGATGATCGTATGGTTACATTACAAGTAATTAATATAACAAATTTTCAGTTATTTATTAA
GTTCTAGTCCAAGAATTATTTTGCCCATATGATAGAATTGTTATTTTATCTATAAAGCAG
CATTCATTTTTGCAGCAAATCTTAAATATAACTACATCATTGTTATTGATTAGTCATTAA
TAAAATTTTTAATTTTTGATAAAAATAAATATTCGTTTATAATTATTAGATTTGGGATAC
CGCTGGTCAAGAACGTTTCTAATCCCTCGGTGGTGCTTTCTATAGAGGTGCTGACTGCTG
TGTTTTGGTCTATGATATTACAAATAAGAAGGTAATTAAATAAATATTTTATGCATAAAA
TAAAGTTAGCAGAATTATAATTTGTTATCTGAAGATCTTACTTGAAGATAAATATTTACA
AATTAGCACAAGTTTTCAAATATTTTTAAATCAACATTTTTTTTATAAAAATTATTTAGA
CCTTTGAAAACTTAGAAAGTTGGAAAGAAGAATTTAAGCAACAAGGTTGCCCTAAAGATC
CTGACACTTTCCCATTTGTTGTTATTGGAAATAAAAGCGATAAAGCATCAGAAAGAAAAG
TTGAAACTGAGTTTGCTCAATAATGGTGCAAATCTAATGGAGACATTAAGCACTTCGAAA
CATCTGCCAAGGATGATACTAATGTTAATGCTGCTTTTATGGCTATTGCTAAGGCTGCCT
CCTCTTAATTCTAAGAAGATGCCATGTAATTTTACTAGAATTTAATTATTTTAGCTTGTT
CAATAGTAATGAGAAAATCAATATAAATTCACTCAATAAGTTTACATTAAATGGAGTTCA
TAATATGAAATATATAAATAAATGAATAAATGAGTATTGATTTCATCATCTAAAAAACGA
AATTTATACACAATTAAAAACAATAAATTAATACCCTATGAATAAAATATTTAACTTTAA
TCTTTAATTATTAAAAGCTTCTTCCCACCAAAGCCTGTTGTTTTGTAAACTGATAAGGCC
AAAAAGAAAGAAAAAAAGGATGACTGCCCTTGTTGA


>TTHERM_00470810(protein)
MSTNKRKQLYKIIILGDSGYVNQRFTQQYRATVGADFMAKEVTIDDRMVTLQIWDTAGQE
RFQSLGGAFYRGADCCVLVYDITNKKTFENLESWKEEFKQQGCPKDPDTFPFVVIGNKSD
KASERKVETEFAQQWCKSNGDIKHFETSAKDDTNVNAAFMAIAKAASSQFQEDAIFFPPK
PVVLQTDKAKKKEKKDDCPC