Identifiers and Description
Gene Model Identifier
TTHERM_00471730Standard Name
NCB2 (nuclear cap-binding protein subunit 2)Aliases
PreTt22581 | 56.m00285 | 3686.m00128Description
NCB2 nuclear cap-binding protein subunit 2; nuclear cap binding proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al.,
2023)
GeneMania
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_11273.1 3.999369102302453e-125 Description: nuclear cap binding protein (234 aa) DictyBase DDB_G0287197 3.00039543526891e-44 Description: ncbp2 on chromosome: 4 position 5395993 to 5396806 Oxytricha Contig9742.0.g62 2.0005131442217614e-40 Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain) WormBase WBGene00009141 1.9998323414791308e-36 Description: locus:ncbp-2 Nuclear cap-binding protein subunit 2 status:Confirmed UniProt:Q93594 protein_id:CCD31067.1 SGD YPL178W 1.000137892321693e-31 Description: CBC2 Small subunit of the heterodimeric cap binding complex that also contains Sto1p, component of the spliceosomal commitment complex; interacts with Npl3p, possibly to package mRNA for export from the nucleus; contains an RNA-binding motif Stentor Coeruleus SteCoe_18840 0.000000000000012664165549094176 Description: None
General Information
No Data fetched for General Information
Associated Literature
- Ref:26688337: Kataoka K, Mochizuki K (2015) Phosphorylation of an HP1-like Protein Regulates Heterochromatin Body Assembly for DNA Elimination. Developmental cell 35(6):775-88
Sequences
>TTHERM_00471730(coding)
ATGGCATCCTTTTTGTATGATAGTCTTTAACCTTAGAGTTTGTATTATGATAAAAAATCA
GAACTTAGCGAATAGGATTATAAAAAAAGACTTGAAACTACTACAACTGTATATGTAGGA
AATTTACATTTCCAAACAAGAGAGAGCGCACTTTATGAATTATTCTCTCGTGCAGGATAA
ATTAAAGATCTTATAATGGGTATTAATAAAGAAGGTTAATCAGCAGGATTCTGTTTTGTT
GTTTACCACACTCACGAAGAAGCTAGAATAGCAGTTGAATATATTTCATAGACAAAACTA
AATGATAGAGTGATTAGAGTAGATTGGGATTATGGTTTTAAAGAAGGAAGATAGTTTGGA
AGAGGTATGGATGGATATCAAAAAAGAGATTAATACAGATAATAAAATGACTCTGGACGT
CATAATATTCATTAGTAATGGAAGGAGCGTTAACAATAGCAATTTTAAGAAAGGTCTAAT
AGTAGAGGTGGCTTTAGAGGGGGCAACAACTATAATTAAGGATAAAGAGAAGGTTATAAG
GGAAGGTTTAATAATAATTAGGGCAATCATAACTTTGATGAAAATAGTTAAAATAGATAT
AAAAAGAGCTACAACTAATTTAGAAATGAACAAAAAGAAAGAAGTAATTCAAGTTCTCCA
GAATATCCTAAGAAAAAGAGATAATAGTAAGATGATGAAAATGATGATTGA>TTHERM_00471730(gene)
ATGGCATCCTTTTTGTATGATAGTCTTTAACCTTAGAGTTTGTATTATGATAAAAAATCA
GAACTTAGCGAATAGGATTATAAAAAAAGACTTGAAACTACTACAACTGTATATGTAGGA
AATTTACATTTCCAAACAAGAGAGAGCGCACTTTATGAATTATTCTCTCGTGCAGGATAA
ATTAAAGATCTTATAATGGGTATTAATAAAGAAGGTTAATCAGCAGGATTCTGTTTTGTT
GTGTAATTTAAGTTATTTTTTGAAAAATTTATAATTTTGTTTAAATAAATGTGTAAAAAT
ATATAATAGCTATAAATATATAAATTTCGTTATTTAAAAAAAGTTACCACACTCACGAAG
AAGCTAGAATAGCAGTTGAATATATTTCATAGACAAAGTTGGTTATTAAATTTTATCATT
TAAAAAAATCTAACTAGTTACTAAGAAAAATTTTAATTTATTAAAACTTAGACTAAATGA
TAGAGTGATTAGAGTAGATTGGGATTATGGTTTTAAAGAAGGAAGATAGTTTGGAAGAGG
TATGGATGGATATCAAAAAAGAGATTAATACAGATAATAAAATGACTCTGGACGTCATAA
TATTCATTAGTAATGGAAGGAGCGTTAACAATAGCAATTTTAAGAAAGGTCTAATAGTAG
AGGTGGCTTTAGAGGGGGCAACAACTATAATTAAGGATAAAGAGAAGGTTATAAGGGAAG
GTTTAATAATAATTAGGGCAATCATAACTTTGATGAAAATAGTTAAAATAGATATAAAAA
GAGCTACAACTAATTTAGAAATGAACAAGTATATTTATAAATATTTTAATTGTAAATTAA
TTAATATCATTTTATCATAATACAATAGAAAGAAAGAAGTAATTCAAGTTCTCCAGAATA
TCCTAAGAAAAAGAGATAATAGTAAGATGATGAAAATGATGATTGA>TTHERM_00471730(protein)
MASFLYDSLQPQSLYYDKKSELSEQDYKKRLETTTTVYVGNLHFQTRESALYELFSRAGQ
IKDLIMGINKEGQSAGFCFVVYHTHEEARIAVEYISQTKLNDRVIRVDWDYGFKEGRQFG
RGMDGYQKRDQYRQQNDSGRHNIHQQWKERQQQQFQERSNSRGGFRGGNNYNQGQREGYK
GRFNNNQGNHNFDENSQNRYKKSYNQFRNEQKERSNSSSPEYPKKKRQQQDDENDD