Identifiers and Description

Gene Model Identifier

TTHERM_00471830

Standard Name

RPN10 (26S Proteasome Regulatory subunit N10)

Aliases

PreTt22591 | 56.m00295 | 3686.m00138

Description

RPN10 ubiquitin interaction motif protein; Ubiquitin interaction motif family protein; assists in protein degradation

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Biological Process

• pyrimidine ribonucleotide biosynthetic process (ISS) | GO:0009220 | Ref:21637855

Domains

• ( PF02809 ) Ubiquitin interaction motif

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_11262.1	9.997093137033517e-262
	Description: ubiquitin interaction domain-containing protein family protein (390 aa)
Oxytricha	Contig18962.0.g37	1.9992362000979228e-56
	Description: von Willebrand factor type A domain
SGD	YHR200W	1.9998745702418095e-48
	Description: RPN10 Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome; N-terminus plays a role in maintaining the structural integrity of the RP; binds selectively to polyubiquitin chains; homolog of the mammalian S5a protein
DictyBase	DDB_G0275775	2.99915080840225e-45
	Description: psmD4 on chromosome: 2 position 5689186 to 5690969
Stentor Coeruleus	SteCoe_18678	1.603810890548638e-28
	Description: None
WormBase	WBGene00004466	9.997975313387782e-28
	Description: locus:rpn-10 status:Confirmed UniProt:O61742 protein_id:CCD61298.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences

>TTHERM_00471830(coding)
ATGACTCTAGAAGCTTCAATTGTTATTTTAGATAATACCGAATATGCAAGAAATGGGGAC
CATTTGCCTTCCAGATATGAAGCATAAGCAGAAACAATCCAGGCTATAATAAATGCAAAA
TAATAAATGAATATGGAAAATGCAGTTGGTATATTAACTATGGGAGGCCCATAAGTTGAA
GTATTAATCACACCTAGCGCAGATCCTGATGCTATTTTAGGCTGCTTATTTGGCGTAAAG
CTTAGAGGTGAAAAAGCTCACTTTTTAAATGCTCTTTAAATTGCTTAGCTTGGATTAAAA
CACAGAAAAAATAAAAATATGAGATAAAGGATAATCGTTTTTGTTGCATCACCAATTGTT
GAAGATGAAAAAACTTTGGAAAGAGTTGCAAAGTAATTAAAAAAGAATAATGTTAGTGTT
GATATTGTTAATCTATGTTAAAGTGGAGTTAATTAAATTGAAAAACTAGACAAATTCATT
CAAACTGTTAATTCAGGTGATTCTTCATACTTTTTAAATGTTTAAAGCGGCATTACTAGT
TTAACAGAAACCCTCTTTAACTCTCCTATATTAAACCGTTTCCTTAGTGGTTCTAACGCT
AACTAAGCCTCGAGTGTAGGTAATGTACCAATCAATCCAACCTAAGCTGGTGGAGCTAAT
CCATTTGCTGAATATGGTGGAATTGATCCCTCTGAAGACCCCGAATTAGCTTAAGCTATG
AAGCTTTCTCTAGAAGAAGAAAAGAGAATTTAAGAATAATTAGAGAGAGAAAAGAATTAA
TAATAATAATAATAGCAAGCACCTAGTTAACCAGCATAAGAAAATGCAACTAGCTTGGCT
TAATAGAATTTAAATACTTCTGCAAATAATCCATCATTTGTAAATGAAACAATGTAAGAT
GAAAATTAGGGCCTTTTAGCAAACAAAGATGATTTTGATGAATTGACAGAAGAAGAGTTG
ATGAATCAAGCTATATTAGCTTCATAATAAGAAAACCCATTTGAAGCATAGCAAGGAGCA
GAAAACAAAGAACCTAGAAAAGAATAAACCAAAAAAGAAGATGATGAATCTGTATAAGCT
AATTTAATGTAGGATGAAAAGTTTGTTGAAGATTTGTTAAATTTAGTTGGTAAAGGAGAT
GAGAAAAAAGATGATAAAAAAGAAAATGAAAAGAAGTGA

>TTHERM_00471830(gene)
ATGACTCTAGAAGCTTCAATTGTTATTTTAGATAATACCGAATATGCAAGAAATGGGGAC
CATTTGCCTTCCAGATATGAAGCATAAGCAGAAACAATCCAGGCTATAATAAATGCAAAA
TAATAAATGAATATGGAAAATGCAGTTGGTATATTAACTATGGGAGGCCCATAAGTTGAA
GTATTAATCACACCTAGCGCAGATCCTGATGCTATTTTAGGCTGCTTATTTGGCGTAAAG
CTTAGAGGTGAAAAAGCTCACTTTTTAAATGCTCTTTAAATTGCTTAGCTTGGATTAAAA
CACAGAAAAAATAAAAATATGAGATAAAGGATAATCGTTTTTGTTGCATCACCAGTAATT
AATTTATTATTTAAACTAATTTTTCAAACTTATAAAAGCATTAAAACTTTAAATTAAATA
TGAAAACTACATAAAATATTTTAGTAGGAATTTTATTTTTGTTGAAAGAAAGAAAGATTT
GAATTTTTAATTTTTAATAAATTTTATAATTTTTGTTAAATAAATGATTATTTATAAATA
TAAAATTAGATTGTTGAAGATGAAAAAACTTTGGAAAGAGTTGCAAAGTAATTAAAAAAG
AATAATGTTAGTGTTGATATTGTTAATCTATGTTAAAGTGGAGTTAATTAAATTGAAAAA
CTAGACAAATTCATTCAAACTGTTAATTCAGGTGATTCTTCATACTTTTTAAATGTTTAA
AGCGGCATTACTAGTTTAACAGAAACCCTCTTTAACTCTCCTATATTAAACCGTTTCCTT
AGTGGTTCTAACGCTAACTAAGCCTCGAGTGTAGGTAATGTACCAATCAATCCAACCTAA
GCTGGTGGAGCTAATCCATTTGCTGAATATGGTGGAATTGATCCCTCTGAAGACCCCGAA
TTAGCTTAAGCTATGAAGCTTTCTCTAGAAGAAGAAAAGAGAATTTAAGAATAATTAGAG
AGAGAAAAGAATTAATAATAATAATAATAGCAAGCACCTAGTTAACCAGCATAAGAAAAT
GCAACTAGCTTGGCTTAATAGAATTTAAATACTTCTGCAAATAATCCATCATTTGTAAAT
GAAACAATGTAAGATGAAAATTAGGGCCTTTTAGCAAACAAAGATGATTTTGATGAATTG
ACAGAAGAAGAGTTGATGAATCAAGCTATATTAGCTTCATAATAAGAAAACCCATTTGAA
GCATAGCAAGGAGCAGAAAACAAAGAACCTAGAAAAGAATAAACCAAAAAAGAAGATGAT
GAATCTGTATAAGCTAATTTAATGTAGGATGAAAAGTTTGTTGAAGATTTGTTAAATTTA
GTTGGTAAAGGAGATGAGAAAAAAGATGATAAAAAAGAAAATGAAAAGAAGTGA

>TTHERM_00471830(protein)
MTLEASIVILDNTEYARNGDHLPSRYEAQAETIQAIINAKQQMNMENAVGILTMGGPQVE
VLITPSADPDAILGCLFGVKLRGEKAHFLNALQIAQLGLKHRKNKNMRQRIIVFVASPIV
EDEKTLERVAKQLKKNNVSVDIVNLCQSGVNQIEKLDKFIQTVNSGDSSYFLNVQSGITS
LTETLFNSPILNRFLSGSNANQASSVGNVPINPTQAGGANPFAEYGGIDPSEDPELAQAM
KLSLEEEKRIQEQLEREKNQQQQQQQAPSQPAQENATSLAQQNLNTSANNPSFVNETMQD
ENQGLLANKDDFDELTEEELMNQAILASQQENPFEAQQGAENKEPRKEQTKKEDDESVQA
NLMQDEKFVEDLLNLVGKGDEKKDDKKENEKK