Identifiers and Description

Gene Model Identifier

TTHERM_00474750

Standard Name

SEC23 (protein transport protein Sec23)

Aliases

PreTt02275 | 57.m00214 | 3709.m00074

Description

SEC23 protein transporter Sec23A; Sec23/Sec24 trunk domain containing protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• COPII vesicle coat (IEA) | GO:0030127

Molecular Function

• protein binding (IEA) | GO:0005515
• zinc ion binding (IEA) | GO:0008270

Biological Process

• endoplasmic reticulum to Golgi vesicle-mediated transport (IEA) | GO:0006888
• intracellular protein transport (IEA) | GO:0006886

Domains

• ( PF00626 ) Gelsolin repeat
• ( PF04810 ) Sec23/Sec24 zinc finger
• ( PF04811 ) Sec23/Sec24 trunk domain
• ( PF04815 ) Sec23/Sec24 helical domain
• ( PF08033 ) Sec23/Sec24 beta-sandwich domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_35301	0
	Description: None
Tetrahymena borealis	EI9_13151.1	9.997093137033517e-262
	Description: Sec23/Sec24 trunk domain-containing protein (751 aa)
Oxytricha	Contig21712.0.g108	9.997093137033517e-262
	Description: Sec23/Sec24 trunk domain
SGD	YPR181C	9.997093137033517e-262
	Description: SEC23 GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, involved in ER to Golgi transport
DictyBase	DDB_G0281985	1.0000509032773212e-171
	Description: sec23 on chromosome: 3 position 5216752 to 5219266
WormBase	WBGene00004754	2.9990837046884738e-127
	Description: locus:sec-23 status:Confirmed UniProt:Q9U2Z1 protein_id:CAB60476.2

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00474750(coding)
ATGATAGATATTTACGAAATAGAGTAAAAAGACGGTGTTAGATGTGTATGGAATAATATA
CCTCCTACTAAACTTGCAGCAACAAGGGCTGTTGTTCCAATTGGTATCCATTACACACCT
TATAAGGAATTAGATCCTAGCAATAGAATGGAATATGAAGCTTTACGTTGCAGATGCCAA
GCAATTTTGAATCCCTACTGCTAAGTTGATTTTAATCAAAAGTTCTGGATTTGCCCTTTT
TGTACTTCCAGAAATCCATTCCCTTAAATTTATCATCAAATTACTCCTTAAAATCTTCCT
GCAGAATTAATGGAAGACTATTCGACTATCGAATATGTTTATTCAAAGGAAAAGCCCGTT
CCAAATATCTTCTTATTAGTTGTTGATGTTAGTTTAGAATAGATTGAATTAGAAGCATTA
AGAGATTCTATTTAGCAATCATTGAATATTATTCCTCCTGATTCATATGTCGGTTTAATT
ACATTCGGAAAGTTTGTTTTTGTTCATGAATTAGGCTTTTAGGAGTGTCCTAAATCATAT
GCATTTAAAGGAAGCAAAGACTATACTACTACATAAGTTTAAGAAATGCTTGGTCTTATT
GCTCCTGGTACTTAGCCAAAGCCTGGAAAAAATATGGACGTTATTAAACGTTTCTTACTT
CCATTGAACGAATGTGAATTTACTTTAAATAGTATTCTTGATGATCTTCAACCTGATCCT
TGGAACGTTCCTTAAGGAGAAAGAGAATAGCGTGCTTCAGGCGTTGCTATCAATGCTGCT
ATCAGCTTAATTGAAGCTTGCCCTATCCCTGGCTCTAGAGTTATGTTCTTCACTGGTGGT
CCTTGCACTATTGGTCCAGGTTAAGTTTTTGGAATCAAGTAAGAGGAAACTCCTCGTTCT
TACTTGGATATCGGCCAAGATAATAGTATTGCTTAATACGTTAAAAAAGCAACTAAATAC
TATCAAACTCTTGCTCTTAGAGCTATAAAAAGCTAGATAACAGTAGATATTTATGGTTTT
TGCCCTGATCAATTTGGTTTGTACGAAATGAAATATATGGCAGAAAAGACTGGAGGTTAC
ATTGTTTTTAATGAAGAATTCAATTCAGATCCTTTCAGAGAAACATTTAGAAAAATATTT
GATAAGGATTAAAATGATGAATTAAGATTTGCATCAGCAGCTAGAATAGATATGTTTGTT
TGCAAGGAAGTTAAGATCTAAGGCGCTTTTGGTTCATGCTCTTCACTAAAGAAGGGTGGC
CCAATGGTTGCTGAAACTCCTATTGGTTAAGGTGGTACCACTCAATGGTATATTGGTGGT
ATGGATAGAAACTCAACATTGACTTTCATGCTAGATTTATCTGCTCACAACAAAGAATAA
AACTAAGCAAAGAGAGCTTTCTTCTAATTCTAAACAACTTACAAATCACCTTCTGGAGAG
ACAAAATTAAGAGTCACAACTTTCTTTAGAAAGTTTGCTGATCCTATAAGTAACTTTGAG
TTAGTTCAAGGTTTTGATTAAGAAGCTGCTTGTGTCTTAATGGCTCGTTTAGGTATTTAA
AAATCTGAATCTGAAGAGCCTATAGAAATTTTAAAATGGCTTGATAGAACCTTAATTAGG
TTTGTAACTCGTTTTGCTGAATATAAGCCAAATATAACTGATTCATTTAAATTACATGAT
AATTTAGCATTGTATCCTTAATTTATGTATCATTTAAGAAGAAGTCACTTCACTTAAATT
TTTGGTTTAAATCCTGATACAATCTCTTATTATCGTTGCACTTTTAATAGAGAAAATGTC
TCTAACTGTTAAGTTATGATTCAACCTGCTATATTCTCTTATTCAATTTAAAATCCAAGT
CCATCTCCTGTTAGTCTCGATGACACAGCTATGAGAAAAGACGTCATTTTATTGCTTGAT
AATTATTTCTAAGTTATTACTTGGTTAGGTCCTCAAATTAAATAATGGAAAGATAAGGAA
TATCATTTGGATCCCACTTATATTTCATTTAAGAACTTGTTAGATTCTCCAATGGAAGAT
GTTAAAGCTATTCTTGAAGATAGATTCCCTACTCCCATTTTTTATGAAACTTACGAAAAT
CATACAAAAGAAAGATATTTAAAATCAAGAATCAATCCTACAGGAAAAAATCAAGACCTT
ATAGATAGTGGTCATACATAAACTGATGATGCCTCATTAAACTAATTTATGGATCATTTA
ATAAAATTAGCTGTTTCCTAACCAAATAGTTGA

>TTHERM_00474750(gene)
ATGATAGATATTTACGAAATAGAGTAAAAAGACGGTGTTAGATGTGTATGGAATAATATA
CCTCCTACTAAACTTGCAGCAACAAGGGCTGTTGTTCCAATTGGTATCCATTACACACCT
TATAAGGAATTAGATCCTAGCAATAGAATGGAATATGAAGCTTTACGTTGCAGATGCCAA
GCAATTTTGAATCCCTACTGCTAAGTTGATTTTAATCAAAAGTTCTGGATTTGCCCTTTT
TGTACTTCCAGAAATCCATTCCCTTAAATTTATCATCAAATTACTCCTTAAAATCTTCCT
GCAGAATTAATGGAAGACTATTCGACTATCGAATATGTATAAATATTTTTATTTAAAAAT
TGAATAATAACAGCTTCAAATTGTGAAATTAAACTTCAAGCAAAATAAATTTAAAACTAG
AATAAAATATTTTTCTTAATTTTTGATAAAATATTTAATAAAAAATATGTTTAAATTCTA
TTTTAAAAGAAATTTCTATCTTTTCTTAACAGTTTTTTAAGTTATCATTTAAAAATAAAA
ATAAAGGTTTATTCAAAGGAAAAGCCCGTTCCAAATATCTTCTTATTAGTTGTTGATGTT
AGTTTAGAATAGATTGAATTAGAAGCATTAAGAGATTCTATTTAGCAATCATTGAATATT
ATTCCTCCTGATTCATATGTCGGTTTAATTACATTCGGAAAGTTTGTTTTTGTTCATGAA
TTAGGCTTTTAGGAGTGTCCTAAATCATATGCATTTAAAGGAAGCAAAGACTATACTACT
ACATAAGTTTAAGAAATGCTTGGTCTTATTGCTCCTGGTACTTAGCCAAAGCCTGGAAAA
AATATGGACGTTATTAAACGTTTCTTACTTCCATTGAACGAATGTGAATTTACTTTAAAT
AGTATTCTTGATGATCTTCAACCTGATCCTTGGAACGTTCCTTAAGGAGAAAGAGAATAG
CGTGCTTCAGGCGTTGCTATCAATGCTGCTGTAATTATTTTATATTTTTCAATTATCAAA
TACACTTAAATACTAGCTTTTATTTCAATTAAATGTAAAAATAAGAAAAAAAATGTTTTT
AATAAATTCAAAGAAATATATTAATCTTATTTTAATATTTAATAGATCAGCTTAATTGAA
GCTTGCCCTATCCCTGGCTCTAGAGTTATGTTCTTCACTGGTGGTCCTTGCACTATTGGT
CCAGGTTAAGTTTTTGGAATCAAGTAAGAGGAAACTCCTCGTTCTTACTTGGATATCGGC
CAAGATAATAGTATTGCTTAATACGTTAAAAAAGCAACTAAATACTATCAAACTCTTGCT
CTTAGAGCTATAAAAAGCTAGATAACAGTAGATATTTATGGTTTTTGCCCTGATCAATTT
GGTTTGTACGAAATGAAATATATGGCAGAAAAGACTGGAGGTTACATTGTTTTTAATGAA
GAATTCAATTCAGATCCTTTCAGAGAAACATTTAGAAAAATATTTGATAAGGATTAAAAT
GATGAATTAAGATTTGCATCAGCAGCTAGAATAGATATGTTTGTTTGCAAGGAAGTTAAG
ATCTAAGGCGCTTTTGGTTCATGCTCTTCACTAAAGAAGGGTGGCCCAATGGTTGCTGAA
ACTCCTATTGGTTAAGGTGGTACCACTCAATGGTAATTTTTTTTATGCAATTTAAAATAA
GAAATTAATATTATTTTTTTTAGGTATATTGGTGGTATGGATAGAAACTCAACATTGACT
TTCATGCTAGATTTATCTGCTCACAACAAAGAATAAAACTAAGCAAAGAGAGCTTTCTTC
TAATTCTAAACAACTTACAAATCACCTTCTGGAGAGACAAAATTAAGAGTCACAACTTTC
TTTAGAAAGTTTGCTGATCCTATAAGTAACTTTGAGTTAGTTCAAGGTTTTGATTAAGAA
GCTGCTTGTGTCTTAATGGCTCGTTTAGGTATTTAAAAATCTGAATCTGAAGAGCCTATA
GAAATTTTAAAATGGCTTGATAGAACCTTAATTAGGTTTGTAACTCGTTTTGCTGAATAT
AAGCCAAATATAACTGATTCATTTAAATTACATGATAATTTAGCATTGTATCCTTAATTT
ATGTATCATTTAAGAAGAAGTCACTTCACTTAAATTTTTGGTTTAAATCCTGATACAATC
TCTTATTATCGTTGCACTTTTAATAGAGAAAATGTCTCTAACTGTTAAGTTATGATTCAA
CCTGCTATATTCTCTTATTCAATTTAAAATCCAAGTCCATCTCCTGTTAGTCTCGATGAC
ACAGCTATGAGAAAAGACGTCATTTTATTGCTTGATAATTATTTCTAAGTTATTACTTGG
TTAGGTCCTCAAATTAAATAATGGAAAGATAAGGAATATCATGTAAATAATTTAATAAAA
AATTCAAAAAATATTTATAAATTTTATTTTTAAATTAGTTGGATCCCACTTATATTTCAT
TTAAGAACTTGTTAGATTCTCCAATGGAAGATGTTAAAGCTATTCTTGAAGATAGATTCC
CTACTCCCATTTTTTATGAAACTTACGAAAATCATACAAAAGAAAGATATTTAAAATCAA
GAATCAATCCTACAGGAAAAAATCAAGACCTTATAGATAGTGGTCATACATAAACTGATG
ATGCCTCATTAAACTAATTTATGGATCATTTAATAAAATTAGCTGTTTCCTAACCAAATA
GTTGA

>TTHERM_00474750(protein)
MIDIYEIEQKDGVRCVWNNIPPTKLAATRAVVPIGIHYTPYKELDPSNRMEYEALRCRCQ
AILNPYCQVDFNQKFWICPFCTSRNPFPQIYHQITPQNLPAELMEDYSTIEYVYSKEKPV
PNIFLLVVDVSLEQIELEALRDSIQQSLNIIPPDSYVGLITFGKFVFVHELGFQECPKSY
AFKGSKDYTTTQVQEMLGLIAPGTQPKPGKNMDVIKRFLLPLNECEFTLNSILDDLQPDP
WNVPQGEREQRASGVAINAAISLIEACPIPGSRVMFFTGGPCTIGPGQVFGIKQEETPRS
YLDIGQDNSIAQYVKKATKYYQTLALRAIKSQITVDIYGFCPDQFGLYEMKYMAEKTGGY
IVFNEEFNSDPFRETFRKIFDKDQNDELRFASAARIDMFVCKEVKIQGAFGSCSSLKKGG
PMVAETPIGQGGTTQWYIGGMDRNSTLTFMLDLSAHNKEQNQAKRAFFQFQTTYKSPSGE
TKLRVTTFFRKFADPISNFELVQGFDQEAACVLMARLGIQKSESEEPIEILKWLDRTLIR
FVTRFAEYKPNITDSFKLHDNLALYPQFMYHLRRSHFTQIFGLNPDTISYYRCTFNRENV
SNCQVMIQPAIFSYSIQNPSPSPVSLDDTAMRKDVILLLDNYFQVITWLGPQIKQWKDKE
YHLDPTYISFKNLLDSPMEDVKAILEDRFPTPIFYETYENHTKERYLKSRINPTGKNQDL
IDSGHTQTDDASLNQFMDHLIKLAVSQPNS