Identifiers and Description
Gene Model Identifier
TTHERM_00476670Standard Name
RPL20 (Ribosomal Protein of the Large subunit #20)Aliases
PreTt06196 | 58.m00168 | 3719.m00028 | RPL18ADescription
RPL20 60S ribosomal protein L18a; Homolog of Yeast RPL20- Human RPL18A; Ribosomal L18ae protein family proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Molecular Function
- rhamnulokinase activity (IEA) | GO:0008993
Biological Process
- asparagine metabolic process (IEA) | GO:0006528
- negative regulation of biosynthetic process (IEA) | GO:0009890
- pyrimidine ribonucleotide catabolic process (IEA) | GO:0009222
Domains
- ( PF01775 ) ribosomal L18ae protein family
Gene Expression Profile
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_14167.1 9.995516318087232e-125 Description: ribosomal L18ae protein family protein (191 aa) Oxytricha Contig16734.0.g67 1.0004249259458435e-52 Description: Ribosomal L18ae/LX protein domain WormBase WBGene00004432 7.997739975804982e-43 Description: locus:rpl-20 60S ribosomal protein L18a status:Confirmed UniProt:O44480 protein_id:CCD68709.1 DictyBase DDB_G0285881 2.0005131442217614e-40 Description: rpl18a on chromosome: 4 position 3775456 to 3776276 SGD YOR312C 9.9981864321491e-40 Description: RPL20B Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Ap and has similarity to rat L18a ribosomal protein Stentor Coeruleus SteCoe_36250 1.2995814250075031e-24 Description: None
General Information
No Data fetched for General Information
Associated Literature
- Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8
Sequences
>TTHERM_00476670(coding)
ATGGTTAGAAAAGCTGCCCAAGAACCCAAGGATGACACCCTCTAAATGAAGGTCAGACAA
TACGTCGTCTCTGCTGCTAGACTTCCCATCGAATAGGGTACCAAGCCTGAAATTCTCTAA
ATGAGAGTCTTCGCTAGAGATGAAGTCCATGCTAAGACCAAATTCTGGTACAACATGAGA
AAGTTGAACAAGATTAAAAGATCTTAAGGTAGAATCCTCTCCGTTAACGAAATCTACGAA
AAGTCCCTCAACACCGTCAAGACCTACGGTATCGTTCTTAAGTACTAATCTAGAACTGCT
ATCCACAACATGTACAAGGAATACAGAGATGTCTCTTTAAACGGTGCTGTTTCTCAACTT
ATCTAAGATATGGCTGGTAACCACAGAGCTCAACCTGATACCATCCAAATTATCAGAACT
GCCACCCTTGAACCCAAGGACATTAAGAGACCTGCTACCCTCGCCATGAGAAACGCTGCT
CTTAAGTTCCCCATCGTCAAGACCATCCACAGACCCTCCGAAAAGAAATACAGAACTGTT
TACAAGGCCACCAGACCTACCACTTTCTAGTGA>TTHERM_00476670(gene)
ATGGTTAGAAAAGCTGCCCAAGAACCCAAGGATGACACCCTCTAAATGAAGGTAGGACCA
GCTTTAAAAATAAAAAAATTTTAATTTCTTCATCAAGTATTTCTTCAGTCTTTGGTAGGA
AGGCATATCATGCTCACCTGACTACCTCATGCTCCTTATTAACTTTAAGAATGCATTTTT
ACACAACATCTCTCTTGGATTTATCAAAAAAAATAATAAGCAAATATTGCTTCAATTAGT
AATTTAACCCTATTAAATATTGCTATCATGTCCAAATCTAGCAACTTTTGAAAAAAATGA
AAAGCAAAGGAGAGGTTTTGCAATATTGGCATTACGCTTCTGATTTCATTCGATCAGAAA
TAACAAAAATAGTGTTCATTATTTGATAGGGAGAGATGGATGGAATTAATTAATAATTAA
TTGCATATTTAGAGAAATACTCAAAATAAAAAGACTGACTTGAATGAAATTAAGTTATCA
TATTTATAATTATTTATTATTAATCAAAAGGTCAGACAATACGTCGTCTCTGCTGCTAGA
CTTCCCATCGAATAGGGTACCAAGCCTGAAATTCTCTAAATGAGAGTCTTCGCTAGAGAT
GAAGTCCATGCTAAGACCAAATTCTGGTAAGATAAATTTAAGATAAATTCAGATTTAGTC
TTCAAAACGAATTAGTCAGAGAGAAAAATATTTTAAACCCATTAACAATCACAATCGTTC
ATTTGCTGTGAGAAAATAAATATACTGGATGGATTAAGCAAAAGGCATTATAGTACAATA
ATTTAAGGTTCTACAATAAAACATATTATCAGTGCAATCTATAAATCAATCAATCAACCA
CTGCATACTAATATATCTTCACTAATACAATATATAAATAAATAAATAAATAAATGAGTG
AGTGAGTGAGTTAGTGAATTAGCTGCATTAATAACAGCAAGCAACAATAAAAAAACAAAT
TCATTCTGTTAAATAAATCTAATAAAAATTTAAAAATTTTAATTAAAAAGTTGAATTAAC
TTAGGCTATAATTCTGCTCTTCTTTAATTAAATGCAAAAATTAGTTTTATGGCTAGGATA
CAAAAAAATTTAATAACCTTAACTTGTTAGAATAAATTTGATTAGATCAACATCATAGTT
TTAGCATTTATTTAAATAAATGAAGGAGCAAACAAACAAGTAAATTAATAAATAAATAAA
TCGATTGTGAAAATGGGAAAGGCTTAAAGTAAAAATAGTTAAAACAATAATATTTAGAAG
GATAGATATATTAATTTATGTAAAAAAAGATCTTAAATCAAAAAAAAATTCAGCGAAATC
AAGCAATATGGGTGAACATATTTAGTTGAAAATATTTATAAAGATAATCCTAAAATTATC
CTGATGAAAAGCAGCAAATATTTCATTTTTAAATATTTCAAAAAAAGCATAGCTTGTAAT
TAAAAAAAAATTATGGAAGCAATCAACAAAATAATTCCACTAATTCGATTTGACTGACAC
TCTTACAAATTCCATTAAATAAATAAATATTAAATATATTTTCTTTTTTAAATAGGTACA
ACATGAGAAAGTTGAACAAGATTAAAAGATCTTAAGGTAGAATCCTCTCCGTTAACGAAA
TCTACGAAAAGTCCCTCAACACCGTCAAGACCTACGGTATCGTTCTTAAGTACTAATCTA
GAACTGCTATCCACAACATGTACAAGGAATACAGAGATGTCTCTTTAAACGGTGCTGTTT
CTCAACTTATCTAAGATATGGCTGGTAACCACAGAGCTCAACCTGATACCATCCAAATTA
TCAGAACTGCCACCCTTGAACCCAAGGACATTAAGAGACCTGCTACCCTCGCCATGAGAG
TAATTTATCAATAATTTATTAAATTAAAAATTCTAATTGAGGACAAACAAAACTTTTCAT
ATTTTATATTTTTAAGAATTCTATTTCCATTTTAAATGAATTATATTGGATCTAATTTAT
TTTTAATGAGATATGTTTGTTTGTCTTTGATTTACTGAAAAAAATATGCTGTTAAAAAAA
ACTATTTATTAAAATTTATCTTCATAAAAATTTAGAACGCTGCTCTTAAGTTCCCCATCG
TCAAGACCATCCACAGACCCTCCGAAAAGAAATACAGAACTGTTTACAAGGCCACCAGAC
CTACCACTTTCTAGTGA>TTHERM_00476670(protein)
MVRKAAQEPKDDTLQMKVRQYVVSAARLPIEQGTKPEILQMRVFARDEVHAKTKFWYNMR
KLNKIKRSQGRILSVNEIYEKSLNTVKTYGIVLKYQSRTAIHNMYKEYRDVSLNGAVSQL
IQDMAGNHRAQPDTIQIIRTATLEPKDIKRPATLAMRNAALKFPIVKTIHRPSEKKYRTV
YKATRPTTFQ