Identifiers and Description
Gene Model Identifier
TTHERM_00476670Standard Name
RPL20 (Ribosomal Protein of the Large subunit #20)Aliases
PreTt06196 | 58.m00168 | 3719.m00028 | RPL18ADescription
RPL20 60S ribosomal protein L18a; Homolog of Yeast RPL20- Human RPL18A; Ribosomal L18ae protein family proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component
- intracellular anatomical structure (IEA) | GO:0005622
- ribosome (IEA) | GO:0005840
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
- ( PF01775 ) ribosomal L18ae protein family
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al.,
2023)
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_14167.1 9.995516318087232e-125 Description: ribosomal L18ae protein family protein (191 aa) Oxytricha Contig16734.0.g67 1.0004249259458435e-52 Description: Ribosomal L18ae/LX protein domain WormBase WBGene00004432 7.997739975804982e-43 Description: locus:rpl-20 60S ribosomal protein L18a status:Confirmed UniProt:O44480 protein_id:CCD68709.1 DictyBase DDB_G0285881 2.0005131442217614e-40 Description: rpl18a on chromosome: 4 position 3775456 to 3776276 SGD YOR312C 9.9981864321491e-40 Description: RPL20B Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Ap and has similarity to rat L18a ribosomal protein Stentor Coeruleus SteCoe_36250 1.2995814250075031e-24 Description: None
General Information
No Data fetched for General Information
Associated Literature
- Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8
Sequences
>TTHERM_00476670(coding)
ATGGTTAGAAAAGCTGCCCAAGAACCCAAGGATGACACCCTCTAAATGAAGGTCAGACAA
TACGTCGTCTCTGCTGCTAGACTTCCCATCGAATAGGGTACCAAGCCTGAAATTCTCTAA
ATGAGAGTCTTCGCTAGAGATGAAGTCCATGCTAAGACCAAATTCTGGTACAACATGAGA
AAGTTGAACAAGATTAAAAGATCTTAAGGTAGAATCCTCTCCGTTAACGAAATCTACGAA
AAGTCCCTCAACACCGTCAAGACCTACGGTATCGTTCTTAAGTACTAATCTAGAACTGCT
ATCCACAACATGTACAAGGAATACAGAGATGTCTCTTTAAACGGTGCTGTTTCTCAACTT
ATCTAAGATATGGCTGGTAACCACAGAGCTCAACCTGATACCATCCAAATTATCAGAACT
GCCACCCTTGAACCCAAGGACATTAAGAGACCTGCTACCCTCGCCATGAGAAACGCTGCT
CTTAAGTTCCCCATCGTCAAGACCATCCACAGACCCTCCGAAAAGAAATACAGAACTGTT
TACAAGGCCACCAGACCTACCACTTTCTAGTGA>TTHERM_00476670(gene)
ATGGTTAGAAAAGCTGCCCAAGAACCCAAGGATGACACCCTCTAAATGAAGGTAGGACCA
GCTTTAAAAATAAAAAAATTTTAATTTCTTCATCAAGTATTTCTTCAGTCTTTGGTAGGA
AGGCATATCATGCTCACCTGACTACCTCATGCTCCTTATTAACTTTAAGAATGCATTTTT
ACACAACATCTCTCTTGGATTTATCAAAAAAAATAATAAGCAAATATTGCTTCAATTAGT
AATTTAACCCTATTAAATATTGCTATCATGTCCAAATCTAGCAACTTTTGAAAAAAATGA
AAAGCAAAGGAGAGGTTTTGCAATATTGGCATTACGCTTCTGATTTCATTCGATCAGAAA
TAACAAAAATAGTGTTCATTATTTGATAGGGAGAGATGGATGGAATTAATTAATAATTAA
TTGCATATTTAGAGAAATACTCAAAATAAAAAGACTGACTTGAATGAAATTAAGTTATCA
TATTTATAATTATTTATTATTAATCAAAAGGTCAGACAATACGTCGTCTCTGCTGCTAGA
CTTCCCATCGAATAGGGTACCAAGCCTGAAATTCTCTAAATGAGAGTCTTCGCTAGAGAT
GAAGTCCATGCTAAGACCAAATTCTGGTAAGATAAATTTAAGATAAATTCAGATTTAGTC
TTCAAAACGAATTAGTCAGAGAGAAAAATATTTTAAACCCATTAACAATCACAATCGTTC
ATTTGCTGTGAGAAAATAAATATACTGGATGGATTAAGCAAAAGGCATTATAGTACAATA
ATTTAAGGTTCTACAATAAAACATATTATCAGTGCAATCTATAAATCAATCAATCAACCA
CTGCATACTAATATATCTTCACTAATACAATATATAAATAAATAAATAAATAAATGAGTG
AGTGAGTGAGTTAGTGAATTAGCTGCATTAATAACAGCAAGCAACAATAAAAAAACAAAT
TCATTCTGTTAAATAAATCTAATAAAAATTTAAAAATTTTAATTAAAAAGTTGAATTAAC
TTAGGCTATAATTCTGCTCTTCTTTAATTAAATGCAAAAATTAGTTTTATGGCTAGGATA
CAAAAAAATTTAATAACCTTAACTTGTTAGAATAAATTTGATTAGATCAACATCATAGTT
TTAGCATTTATTTAAATAAATGAAGGAGCAAACAAACAAGTAAATTAATAAATAAATAAA
TCGATTGTGAAAATGGGAAAGGCTTAAAGTAAAAATAGTTAAAACAATAATATTTAGAAG
GATAGATATATTAATTTATGTAAAAAAAGATCTTAAATCAAAAAAAAATTCAGCGAAATC
AAGCAATATGGGTGAACATATTTAGTTGAAAATATTTATAAAGATAATCCTAAAATTATC
CTGATGAAAAGCAGCAAATATTTCATTTTTAAATATTTCAAAAAAAGCATAGCTTGTAAT
TAAAAAAAAATTATGGAAGCAATCAACAAAATAATTCCACTAATTCGATTTGACTGACAC
TCTTACAAATTCCATTAAATAAATAAATATTAAATATATTTTCTTTTTTAAATAGGTACA
ACATGAGAAAGTTGAACAAGATTAAAAGATCTTAAGGTAGAATCCTCTCCGTTAACGAAA
TCTACGAAAAGTCCCTCAACACCGTCAAGACCTACGGTATCGTTCTTAAGTACTAATCTA
GAACTGCTATCCACAACATGTACAAGGAATACAGAGATGTCTCTTTAAACGGTGCTGTTT
CTCAACTTATCTAAGATATGGCTGGTAACCACAGAGCTCAACCTGATACCATCCAAATTA
TCAGAACTGCCACCCTTGAACCCAAGGACATTAAGAGACCTGCTACCCTCGCCATGAGAG
TAATTTATCAATAATTTATTAAATTAAAAATTCTAATTGAGGACAAACAAAACTTTTCAT
ATTTTATATTTTTAAGAATTCTATTTCCATTTTAAATGAATTATATTGGATCTAATTTAT
TTTTAATGAGATATGTTTGTTTGTCTTTGATTTACTGAAAAAAATATGCTGTTAAAAAAA
ACTATTTATTAAAATTTATCTTCATAAAAATTTAGAACGCTGCTCTTAAGTTCCCCATCG
TCAAGACCATCCACAGACCCTCCGAAAAGAAATACAGAACTGTTTACAAGGCCACCAGAC
CTACCACTTTCTAGTGA>TTHERM_00476670(protein)
MVRKAAQEPKDDTLQMKVRQYVVSAARLPIEQGTKPEILQMRVFARDEVHAKTKFWYNMR
KLNKIKRSQGRILSVNEIYEKSLNTVKTYGIVLKYQSRTAIHNMYKEYRDVSLNGAVSQL
IQDMAGNHRAQPDTIQIIRTATLEPKDIKRPATLAMRNAALKFPIVKTIHRPSEKKYRTV
YKATRPTTFQ