Identifiers and Description

Gene Model Identifier

TTHERM_00499370

Standard Name

LTL1 (Lia3-like 1)

Aliases

PreTt07980 | 63.m00158 | 3716.m00012

Description

Accumulation-associated protein; A Lia3-like protein that regulates DNA elimination boundaries

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00376 ) transcriptional regulator, MerR family
  • ( PF07453 ) NUMOD1 domain
  • ( TIGR01764 ) DNA binding domain, excisionase family

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_09696.1 9.997093137033517e-262
Description: hypothetical protein (412 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:31194876: Jaspan VN, Taye ME, Carle CM, Chung JJ, Chalker DL (2019) Boundaries of eliminated heterochromatin of Tetrahymena are positioned by the DNA-binding protein Ltl1. Nucleic acids research ( ):
  2. Ref:26950070: Carle CM, Zaher HS, Chalker DL (2016) A Parallel G Quadruplex-Binding Protein Regulates the Boundaries of DNA Elimination Events of Tetrahymena thermophila. PLoS genetics 12(3):e1005842
  3. Ref:26688337: Kataoka K, Mochizuki K (2015) Phosphorylation of an HP1-like Protein Regulates Heterochromatin Body Assembly for DNA Elimination. Developmental cell 35(6):775-88

Sequences

>TTHERM_00499370(coding)
ATGAATTTAACTTCTTAGCCTATAAACATAGAGGCAAAAAGTCTCATAGTCTCATTAAAG
TAAAGGGAATATACTAATGAAGAGATAAATACTATTCTTATCTAACTCGGATATGAGTCG
ACACCAAGAATAGTCTAGAATTAATGGAGAATTTATGAAGAAAGAAAGTAATCTAAGTAA
AAAAAAGAAACAAAGAGAGCTCCTCCTTTTATGCTTAACTCTGAAAAAATAAAGCAAATG
ACCTATCTTTTCCTTAATAATTAAGAAATGACAGTAAATAAGGCGTCGAAATTATTTGGA
ATAGGCAAGTAACAAATTAGGAGATATTTAATTTAGTTTGGTATTGGCTGTACGAAGGGC
AAAGGATAAAAATTTGAAAGATACACTTTTAAAAAATTTAACAAAAAGAAATTGACTTCT
TCTGAAATTGAAGAAATAGAAAACGAAGAGTTATAAAAGCGATTAAATCGTCCTATGATT
CAAGAACCAAGTCCGATAGACCCTTAATCGCCTCCCATTTGGAAAAAGATTGAAATGAGA
ATTATTTTCCCTAAAATAAGATATGGCTAAGTTCATTAGTGGGAAAGATATTATGATAGG
CTAATTAATGAAGTTAAACTAAATAGTTTGAAATTTCTAGATTTTAAAAGGGGAGAAAAA
TTTACTGGTAAAGGCTGCTATATTTACATTTTGTCTGAATATGATTAAAATGTTTTCTTG
GATAATTTTACTTTAGAAAAGTTCTTAGAAACTTCTTTACCAGAGGATTTTTTTGCTGGG
AATTGCCTTAATACAAATAAAATTAGAATTTTTGATTACCCATATATTCCATAAAATTTA
CCTCAGGAGGATATCATTAACCTTAATGATCCAAATATAGAAGAAATATTTAAAAAAGTT
AATAATAAAATCAAAAACATGAATGAATAAGAATAACAACAATTAAACAGTTTAGCACTA
TAAATTCATTAATAATATTAAAAAGATGCAAATAAGTAATTTAATCCAATGAATAGCGAA
TCTTCAATGAGCGAAGAGGAGCCTGATTAAGAATCTAAAAATATTTTATAAATGAATTTA
CAAAAGAAAATTGCAAAAAGCAAATTCTTGCCTAATGTTTAAGGAATGGATATTGATGAA
TAAAATTAGCTATTGTTTAAAGAAATGGATTAGTTAGAAAATAATTAAGATTATTAACTA
GACAACACTCAAGATAACTAATTTTTTGCAAAATAAGAAGACGTTTTAAATTGA


>TTHERM_00499370(gene)
ATGAATTTAACTTCTTAGCCTATAAACATAGAGGCAAAAAGTCTCATAGTCTCATTAAAG
TAAAGGGAATATACTAATGAAGAGATAAATACTATTCTTATCTAACTCGGATATGAGTCG
ACACCAAGAATAGTCTAGAATTAATGGAGAATTTATGAAGAAAGAAAGTAATCTAAGTAA
AAAAAAGAAACAAAGAGAGCTCCTCCTTTTATGCTTAACTCTGAAAAAATAAAGCAAATG
ACCTATCTTTTCCTTAATAATTAAGAAATGACAGTAAATAAGGCGTCGAAATTATTTGGA
ATAGGCAAGTAACAAATTAGGAGATATTTAATTTAGTTTGGTATTGGCTGTACGAAGGTA
TTTATTTATCGATCAACATAAAAATTTAATAACTTTAATATAATTATTGATTTTATTGTT
AAAGCTATTTTATTAATTATTAAAAGGGCAAAGGATAAAAATTTGAAAGATACACTTTTA
AAAAATTTAACAAAAAGAAATTGACTTCTTCTGAAATTGAAGAAATAGAAAACGAAGAGT
TATAAAAGCGATTAAATCGTCCTATGATTCAAGAACCAAGTCCGATAGACCCTTAATCGC
CTCCCATTTGGTAATTTTTTATATTTGAAAATTTCAGGTAATTTATAGTAAACAAAATCA
TAGGAAAAAGATTGAAATGAGAATTATTTTCCCTAAAATAAGATATGGCTAAGTTCATTA
GTGGGAAAGATATTATGATAGGCTAATTAATGAAGTTAAACTAAATAGTTTGAAATTTCT
AGATTTTAAAAGGGGAGAAAAATTTACTGGTAAAGGCTGCTATATTTACATTTTGTCTGA
ATATGATTAAAATGTTTTCTTGGATAATTTTACTTTAGAAAAGTTCTTAGAAACTTCTTT
ACCAGAGGATTTTTTTGCTGGGAATTGCCTTAATACAAATAAAATTAGAATTTTTGATTA
CCCATATATTCCATAAAATTTACCTCAGGAGGATATCATTAACCTTAATGATCCAAATAT
AGAAGAAATATTTAAAAAAGTTAATAATAAAATCAAAAACATGAATGAATAAGAATAACA
ACAATTAAACAGTTTAGCACTATAAATTCATTAATAATATTAAAAAGATGCAAATAAGTA
ATTTAATCCAATGAATAGCGAATCTTCAATGAGCGAAGAGGAGCCTGATTAAGAATCTAA
AAATATTTTATAAATGAATTTACAAAAGAAAATTGCAAAAAGCAAATTCTTGCCTAATGT
TTAAGGAATGGATATTGATGAATAAAATTAGCTATTGTTTAAAGAAATGGATTAGTTAGA
AAATAATTAAGATTATTAACTAGACAACACTCAAGATAACTAATTTTTTGCAAAATAAGA
AGACGTTTTAAATTGA


>TTHERM_00499370(protein)
MNLTSQPINIEAKSLIVSLKQREYTNEEINTILIQLGYESTPRIVQNQWRIYEERKQSKQ
KKETKRAPPFMLNSEKIKQMTYLFLNNQEMTVNKASKLFGIGKQQIRRYLIQFGIGCTKG
KGQKFERYTFKKFNKKKLTSSEIEEIENEELQKRLNRPMIQEPSPIDPQSPPIWKKIEMR
IIFPKIRYGQVHQWERYYDRLINEVKLNSLKFLDFKRGEKFTGKGCYIYILSEYDQNVFL
DNFTLEKFLETSLPEDFFAGNCLNTNKIRIFDYPYIPQNLPQEDIINLNDPNIEEIFKKV
NNKIKNMNEQEQQQLNSLALQIHQQYQKDANKQFNPMNSESSMSEEEPDQESKNILQMNL
QKKIAKSKFLPNVQGMDIDEQNQLLFKEMDQLENNQDYQLDNTQDNQFFAKQEDVLN