Identifiers and Description

Gene Model Identifier

TTHERM_00525150

Standard Name

PRP2 (Pre-mRNA Processing factor 2)

Aliases

PreTt06352 | 66.m00151 | 3722.m00010

Description

PRP2 U2 snRNP auxilliary splicing factor; U2 snRNP auxilliary factor; splicing factor

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• macronucleus (IDA) | GO:0031039

Biological Process

• regulation of mRNA splicing, via spliceosome (IDA) | GO:0048024

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( TIGR01622 ) splicing factor, CC1-like family
• ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_13363.1	9.997093137033517e-262
	Description: U2 snRNP auxilliary factor, splicing factor (473 aa)
Oxytricha	Contig20715.0.g17	3.000458792073453e-56
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00006697	6.000354955737408e-39
	Description: locus:uaf-1 status:Confirmed UniProt:Q8MXS2 protein_id:CCD62281.1
DictyBase	DDB_G0286395	4.998978211117678e-38
	Description: u2af2 on chromosome: 4 position 4405482 to 4407497
Stentor Coeruleus	SteCoe_4228	4.780892883885469e-25
	Description: None
SGD	YIR005W	0.0005997485943342685
	Description: IST3 Component of the U2 snRNP, required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00525150(coding)
ATGGATATCGAAATTAATTAACTATAATATAATAATCAATAAGGAGAGGAGTTTAAGTAA
GCTGAAGAATAAATAATTGAATAGGATCATAGAAAATATTCTAGTGATGAAGAAGAGGAA
GATGATGAAGATATCATATAAAAATAAAAAAACGAATCTATCAAAGATGAGAATACTACA
TAAATAAGCAATTAAGATGGAGGAGATGGCTAAAAATAAAAGAAGAAGAAGAAAAAGAAA
AGAAAAAGAGACTTACCTGAAGAGGAGGAAACTGATTATGAAGTAGATATTGTCAAAAAA
GCTAAAACATCAAAATTATTACTTTGTGAAGCAATTCAAGATCATTTAAGATAAAGATAT
GCATTAATAGAAGCCAACCCTTGGTTATTAATTGTATCTGATATACCAAGAATGATTACA
GATATTGAAATTAAGGAGTTCTTCAATATTCTAATTTCTAAATTAAGACCAGAACTAGCT
GAACCCTCACCTGTTGTAAAAGTAGATGTTATGACCAATGGATAATTTGCTACTATGCAT
ATGAGTTGTAAATTGGCCAAAAGCTTTGCTCTTACTTTAAGGGGTGTTGAATTCTAAAAA
TGCAAATTGATGATAGAAAAACCCAAGCAATACTTTTTTAGGATGTATATGGAGAAATAA
TAAAATGATGATGTTATGGTAGATGTAGATGATGGTGCTTTGTAGCAAATGCAAATGAAT
AAAATTTATATGGGTGGTTTGCCTACTTATTTAAAAGACATAGATGTTAGAAAATTATGT
GAAACCTTTGGCAAATTAAAATACTTTAATGTAGCAAAACAATAAAATGAAAATAAAGAG
CAAGTTTCTAAAGGTTACTGTTTTTTTGAATACGAAGATCCAAATATCACTGAGAAAGCT
ATTAAAGCACTTAATGGTCTACCTTGTGGTGATAGAAAGTTAAAAGTTTCTAGAGTCACA
AAAGATCAAAATAAACTTGCAAATACACAATAAATTTAAAGTGAAAAAAACAAATTAGCT
CCTTCTAATAATAGTGGTAGTTTTCTAGGAGGTTCTGATTTAATTAGAAAAGACGAATTT
TAAAAGTTATTAACTATTCCGGAATTTACTTCTCTTCCAAGTAGAGTTATTCAATTATTA
AATATGGTGTCAATTGAAGATCTATTTGAAGATGACATTGTAGATGATTTATATTAAGAT
GTTATGACAGAATGCGAGAAAATAGGACCAGTTGAGAAAATAGAAATCCCAAAGCCATGC
AAAACTACAGGCATATGCCCTCCATGCATAGGAAAAGTTTTTGTTAAATTTAAATATATG
TTGAAGGCAAAGAAGGCAAGATATAGTTTGAATGGAAGAACATATAATCGTAGAACAGTA
ATAGCTTCATTTTATCCTGAGGATAAGTTTGATCGCAAAGATTTTCTTGTTTCTATTTTG
TGA

>TTHERM_00525150(gene)
ATGGATATCGAAATTAATTAACTATAATATAATAATCAATAAGGAGAGGAGTTTAAGTAA
GCTGAAGAATAAATAATTGAATAGGATCATAGAAAATATTCTAGTGATGAAGAAGAGGAA
GATGATGAAGATATCATATAAAAATAAAAAAACGAATCTATCAAAGATGAGAATACTACA
TAAATAAGCAATTAAGATGGAGGAGATGGCTAAAAATAAAAGAAGAAGAAGAAAAAGAAA
AGAAAAAGAGACTTACCTGAAGAGGAGGAAACTGATTATGAAGTAGATATTGTCAAAAAA
GCTAAAACATCAAAATTATTACTTTGTGAAGCAATTCAAGATCATTTAAGATAAAGATAT
GCATTAATAGAAGCCAACCCTTGGTTATTAATTGTATCTGATATACCAAGAATGATTACA
GATATTGAAATTAAGGAGTTCTTCAATATTCTAATTTCTAAATTAAGACCAGAACTAGCT
GAACCCTCACCTGTTGTAAAAGTAGATGTTATGACCAATGGATAATTTGCTACTATGCAT
ATGAGTTGTAAATTGGCCAAAAGCTTTGCTCTTACTTTAAGGGGTGTTGAATTCTAAAAA
TGCGTAAAAATTATGATTAAAAGAAAATTTTAGAAATAAAAGAGAGAATTTATAATAAAA
TCAAGCAAAAATAAATCTTTTCAATAAAAAATATTTTTTCAAATCTAAAAAAGTGATAGA
AACACATAAATTTATAATTATAATTAATTTTATAAATAACTTCTTTTAGTTAAAAATATT
AGCTTGATTTTGTTAACTTTTTCTTCAAAAAATCTACATTTTCTTTTGAAAATGATATTA
TTTTCAAGATAAAGATTGAAATTTATTTTTAAAACATTTATTTAATTTCATATATTTTTT
ATAATATAGAAATTGATGATAGAAAAACCCAAGCAATACTTTTTTAGGATGTATATGGAG
AAATAATAAAATGATGATGTTATGGTAGATGTAGATGATGGTGCTTTGTAGCAAATGCAA
ATGAATAAAATTTATATGGGTGGTTTGCCTACTTATTTAAAAGACATAGATGTTAGAAAA
TTATGTGAAACCTTTGGCAAATTAAAATACTTTAATGTAGCAAAACAATAAAATGAAAAT
AAAGAGCAAGTTTCTAAAGGTTACTGTTTTTTTGAATACGAAGATCCAAATATCACTGAG
AAAGCTATTAAAGCACTTAATGGTCTACCTTGTGGTGATAGAAAGTTAAAAGTTTCTAGA
GTCACAAAAGATCAAAATAAACTTGCAAATACACAATAAATTTAAAGTGAAAAAAACAAA
TTAGCTCCTTCTAATAATGTAAATTGAATTCAAACATATTTTTTTATTTTAAAAACTCGT
ATAAAATAGAGTGGTAGTTTTCTAGGAGGTTCTGATTTAATTAGAAAAGACGAATTTTAA
AAGTTATTAACTATTCCGGAATTTACTTCTCTTCCAAGTAGAGTTATTCAATTATTAAAT
ATGGTGTCAATTGAAGATCTATTTGAAGATGACATTGTAGATGATTTATATTAAGATGTT
ATGACAGAATGCGAGAAAATAGGACCAGTTGAGAAAATAGAAATCCCAAAGCCATGCAAA
ACTACAGGCATATGCCCTCCATGCATAGGAAAAGTTTTTGTTAAATTTAAGTAAATTTTT
ATATCATTAAAATTATAAATTTCTAAATATCATTTGAGGTTTTTAAAGGAAATTTCTAAG
AACTTTTTATAAATAAAAAATTAAAATATATTTTTTATTTACAAAGATATATGTTGAAGG
CAAAGAAGGCAAGATATAGTTTGAATGGAAGAACATATAATCGTAGAACAGTAATAGCTT
CATTTTATCCTGAGGATAAGTTTGATCGCAAAGATTTTCTTGTTTCTATTTTGTGA

>TTHERM_00525150(protein)
MDIEINQLQYNNQQGEEFKQAEEQIIEQDHRKYSSDEEEEDDEDIIQKQKNESIKDENTT
QISNQDGGDGQKQKKKKKKKRKRDLPEEEETDYEVDIVKKAKTSKLLLCEAIQDHLRQRY
ALIEANPWLLIVSDIPRMITDIEIKEFFNILISKLRPELAEPSPVVKVDVMTNGQFATMH
MSCKLAKSFALTLRGVEFQKCKLMIEKPKQYFFRMYMEKQQNDDVMVDVDDGALQQMQMN
KIYMGGLPTYLKDIDVRKLCETFGKLKYFNVAKQQNENKEQVSKGYCFFEYEDPNITEKA
IKALNGLPCGDRKLKVSRVTKDQNKLANTQQIQSEKNKLAPSNNSGSFLGGSDLIRKDEF
QKLLTIPEFTSLPSRVIQLLNMVSIEDLFEDDIVDDLYQDVMTECEKIGPVEKIEIPKPC
KTTGICPPCIGKVFVKFKYMLKAKKARYSLNGRTYNRRTVIASFYPEDKFDRKDFLVSIL