Identifiers and Description

Gene Model Identifier

TTHERM_00533980

Standard Name

HMGB4 (high mobility group box protein)

Aliases

PreTt19955 | 68.m00244 | 3830.m00606

Description

high mobility group (HMG)-box protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• DNA binding (IEA) | GO:0003677

Domains

• ( PF00505 ) HMG (high mobility group) box

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_6022	0
	Description: None
Tetrahymena borealis	EI9_11911.1	9.999776257620412e-83
	Description: hypothetical protein (209 aa)
Tetrahymena borealis	EI9_05590.1	9.999776257620412e-83
	Description: protein kinase domain-containing protein (297 aa)
Oxytricha	Contig4075.0.g7	0.0004999512321494991
	Description: HMG (high mobility group) box

General Information

No Data fetched for General Information

Associated Literature

1. Ref:31932604: Nabeel-Shah S, Ashraf K, Saettone A, Garg J, Derynck J, Lambert JP, Pearlman RE, Fillingham J (2020) Nucleus-specific linker histones Hho1 and Mlh1 form distinct protein interactions during growth, starvation and development in Tetrahymena thermophila. Scientific reports 10(1):168

Sequences

>TTHERM_00533980(coding)
ATGAACAATATTTAGTAAGCAGGCTATTACTACTACAGGAAGTCAACAATACTCTTCTTT
ACTAATAATGGAGAAAAAGAATACAATAATTTAATAAAGAAACAACAATACCTAGCCTGG
GTAGATTTGCCTTAGCATCAAAAAAATTTATTTGAATCAGTAGCTCTGTTTTGTAGCAAA
AATTAAATAGTTTAATTTGATAAATATACTAAAAGACCATTGAAACCATAGACTCCTCTG
TTTTTATATTTTAGAGTTGTAGAAGAAAAATTAAAGAAAGATTATCCTAAGCTCAAGCAA
TCATAAATTTTCTAAATTGCTGAGAAAAAATGGAAAAATGAGCTAATTTTTAGAATAAAG
GAGTAGTTTATTAAAATACACTAAATACTTGAGCTTTGCTATTATAACGATATCACAGAG
TATAAAAAGGCAAATATCGAATTAGAAAACAGCCATTATGAGAAAAAGGTAGCTCAAAAA
GAATAAAAATCCTTACCTTTACTTAAAAAAAACACTTTAACTAGACAGTGTGCAGCTTAT
TATAATTAGAATTAAAGTAAAAATCATCTATAGTAAATACCTAATAATCTTAATTTCACT
AGTACCCAACAATATCAAGTAATATATTGA

>TTHERM_00533980(gene)
ATGAACAATATTTAGTAAGCAGGCTATTACTACTACAGGAAGTCAACAATACTCTTCTTT
ACTAATAATGGAGAAAAAGAATACAATAATTTAATAAAGAAACAACAATACCTAGCCTGG
GTAGATTTGCCTTAGCATCAAAAAAATTTATTTGAATCAGTAGCTCTGTTTTGTAGCAAA
AATTAAATAGTTTAATTTGATAAATATACTAAAAGAGTAAAATATTCACTATTCTGATTT
TTTAAAATAATTACAATTTATTCTTATGAATAGCCATTGAAACCATAGACTCCTCTGTTT
TTATATTTTAGAGTTGTAGAAGAAAAATTAAAGAAAGATTATCCTAAGCTCAAGCAATCA
TAAATTTTCTAAATTGCTGAGAAAAAATGGAAAAATGAGCTAATTTTTAGAATAAAGGAG
TAGTTTATTAAAATACACTAAATACTTGAGCTTTGCTATTATAACGATATCACAGAGTAT
AAAAAGGCAAATATCGAATTAGAAAACAGCCATTATGAGAAAAAGGTAGCTCAAAAAGAA
TAAAAATCCTTACCTTTACTTAAAAAAAACACTTTAACTAGACAGTGTGCAGCTTATTAT
AATTAGAATTAAAGTAAAAATCATCTATAGTAAATACCTAATAATCTTAATTTCACTAGT
ACCCAACAATATCAAGTAATATATTGA

>TTHERM_00533980(protein)
MNNIQQAGYYYYRKSTILFFTNNGEKEYNNLIKKQQYLAWVDLPQHQKNLFESVALFCSK
NQIVQFDKYTKRPLKPQTPLFLYFRVVEEKLKKDYPKLKQSQIFQIAEKKWKNELIFRIK
EQFIKIHQILELCYYNDITEYKKANIELENSHYEKKVAQKEQKSLPLLKKNTLTRQCAAY
YNQNQSKNHLQQIPNNLNFTSTQQYQVIY