Identifiers and Description

Gene Model Identifier

TTHERM_00540340

Standard Name

CPH2 (homolog of CAP-H or BRN1 condensin gene)

Aliases

PreTt12192 | 70.m00188 | 3728.m00085

Description

CPH2 condensin complex subunit 2; condensin subunit, kleisin; Condensin complex subunit 2/barren

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

  • 3-keto-sphinganine metabolic process (IEA) | GO:0006666
  • aromatic amino acid family catabolic process (IEA) | GO:0009074
  • aromatic amino acid metabolic process (IEA) | GO:0009072
  • cell wall modification involved in fruit ripening (IEA) | GO:0009829
  • coenzyme A biosynthetic process (IEA) | GO:0015937
  • cysteine catabolic process (IEA) | GO:0009093
  • cytoplasmic translational termination (IEA) | GO:0002184
  • D-glycero-D-manno-heptose 7-phosphate metabolic process (IEA) | GO:2001060
  • donor selection (IEA) | GO:0007535
  • Factor XII activation (IEA) | GO:0002542
  • female gamete generation (IEA) | GO:0007292
  • galactose to glucose-1-phosphate metabolic process (IEA) | GO:0061612
  • germarium-derived oocyte fate determination (IEA) | GO:0007294
  • glycolytic process from glycerol (IEA) | GO:0061613
  • glycolytic process through fructose-6-phosphate (IEA) | GO:0061615
  • heme A biosynthetic process (IEA) | GO:0006784
  • heme biosynthetic process (IEA) | GO:0006783
  • homoserine metabolic process (IEA) | GO:0009092
  • induction by virus of host reticulophagy (IEA) | GO:0140883
  • induction of apoptosis by extracellular signals (IEA) | GO:0008624
  • intraciliary retrograde transport (IEA) | GO:0035721
  • leukocyte chemotaxis involved in inflammatory response (IEA) | GO:0002232
  • lysine biosynthetic process via diaminopimelate (IEA) | GO:0009089
  • maltoheptaose catabolic process (IEA) | GO:2001123
  • methane biosynthetic process from methanethiol (IEA) | GO:2001133
  • micronucleus organization (IEA) | GO:0032125
  • microtubule cytoskeleton organization involved in mitosis (IEA) | GO:1902850
  • mitochondrial membrane organization (IEA) | GO:0007006
  • mitotic S phase (IEA) | GO:0000084
  • modulation by host of symbiont molecular function (IEA) | GO:0052428
  • multicellular organism development (IEA) | GO:0007275
  • negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (IEA) | GO:1902647
  • negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902642
  • negative regulation of cellular glucuronidation (IEA) | GO:2001030
  • negative regulation of complement-dependent cytotoxicity (IEA) | GO:1903660
  • negative regulation of intrinsic apoptotic signaling pathway (IEA) | GO:2001243
  • negative regulation of L-glutamine biosynthetic process (IEA) | GO:0062133
  • negative regulation of low-density lipoprotein particle receptor catabolic process (IEA) | GO:0032804
  • negative regulation of metanephric nephron tubule epithelial cell differentiation (IEA) | GO:0072308
  • negative regulation of mRNA binding (IEA) | GO:1904572
  • negative regulation of PERK-mediated unfolded protein response (IEA) | GO:1903898
  • negative regulation of response to drug (IEA) | GO:2001024
  • negative regulation of ubiquinone biosynthetic process (IEA) | GO:1904774
  • neutral lipid metabolic process (IEA) | GO:0006638
  • Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment (IEA) | GO:2000796
  • obsolete extracellular carbohydrate transport (IEA) | GO:0006859
  • obsolete histone H3-K56 deacetylation (IEA) | GO:0071572
  • obsolete histone H4-K20 demethylation (IEA) | GO:0035574
  • obsolete induction by organism of defense-related symbiont reactive oxygen species production (IEA) | GO:0052401
  • obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (IEA) | GO:0070055
  • obsolete positive regulation of 1-phosphatidylinositol-3-kinase activity (IEA) | GO:0061903
  • obsolete regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter (IEA) | GO:0072364
  • obsolete regulation of histone H3-K27 methylation (IEA) | GO:0061085
  • obsolete reproduction (IEA) | GO:0000003
  • ommochrome biosynthetic process (IEA) | GO:0006727
  • phagocytosis (IEA) | GO:0006909
  • plant-type cell wall modification (IEA) | GO:0009827
  • positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902643
  • positive regulation of dendrite extension (IEA) | GO:1903861
  • positive regulation of embryonic pattern specification (IEA) | GO:1902877
  • positive regulation of oxidative phosphorylation (IEA) | GO:1903862
  • positive regulation of phospholipid translocation (IEA) | GO:0061092
  • positive regulation of protein autoubiquitination (IEA) | GO:1902499
  • positive regulation of siRNA processing (IEA) | GO:1903705
  • pronephric glomerulus morphogenesis (IEA) | GO:0035775
  • propan-2-ol biosynthetic process (IEA) | GO:1902640
  • protein localization to old growing cell tip (IEA) | GO:1903858
  • pyrimidine nucleotide salvage (IEA) | GO:0032262
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (IEA) | GO:1902646
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902641
  • regulation of beta-glucan metabolic process (IEA) | GO:0032950
  • regulation of bile acid metabolic process (IEA) | GO:1904251
  • regulation of cellular response to hepatocyte growth factor stimulus (IEA) | GO:2001112
  • regulation of complement-dependent cytotoxicity (IEA) | GO:1903659
  • regulation of cytokinin dehydrogenase activity (IEA) | GO:1903856
  • regulation of gibberellic acid mediated signaling pathway (IEA) | GO:0009937
  • regulation of long-chain fatty acid import across plasma membrane (IEA) | GO:0010746
  • regulation of microglial cell migration (IEA) | GO:1904139
  • regulation of phosphatidylcholine biosynthetic process (IEA) | GO:2001245
  • regulation of phosphorus utilization (IEA) | GO:0006795
  • regulation of plant epidermal cell differentiation (IEA) | GO:1903888
  • release of sequestered calcium ion into cytosol by endoplasmic reticulum (IEA) | GO:1903514
  • response to ethylene (IEA) | GO:0009723
  • response to reactive oxygen species (IEA) | GO:0000302
  • response to singlet oxygen (IEA) | GO:0000304
  • retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (IEA) | GO:0006890
  • sesquiterpenoid biosynthetic process (IEA) | GO:0016106
  • somatic diversification of immune receptors (IEA) | GO:0002200
  • sperm aster formation (IEA) | GO:0035044
  • spermatogonial cell division (IEA) | GO:0007284
  • synaptic vesicle priming (IEA) | GO:0016082
  • tertiary alcohol biosynthetic process (IEA) | GO:1902645
  • transcription by RNA polymerase V (IEA) | GO:0001060

Domains

  • ( PF05786 ) Condensin complex subunit 2

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29237819: Howard-Till R, Loidl J (2018) Condensins promote chromosome individualization and segregation during mitosis, meiosis, and amitosis in Tetrahymena thermophila. Molecular biology of the cell 29(4):466-478

Sequences

>TTHERM_00540340(coding)
ATGAATGCAAACAAAAAGCAAACAAAAATTAGAAGGGCAAAAAGCACTTTGAAGAGTTCT
AGAAAGGAAAAATATAGCATAGAAGATTTAGAAACAGAAAAGGAAAGTAACATATCATCT
TATGATCTTGATTATTAGGATGATATTTGGGAGATTAATTCTAATTAAAAAGCAGCTGAA
ATATCTTTTTCTTAGAAAAAAAATGTAAGTGTGAATAGCAGTCTTAAAGGGAGAAATAAT
AGTCAGCTAGTTAAATCTGACGATTTAGCTATGAAGACTTCTAATAAACCTATCAGGAGA
GTTAACACAAGCATAAGCATGAGTTAGAGCTCTGTATAAATATAGGATGAAAGCATAGAT
TTGGATGCTGAAAGCGATCAAGAAAGTGATGATGATTCACATCTCACTCCAGAATAAAAA
TAACTAAAAGATAGATGGCTTCAAATATTCCAAAAAATATCTAAAAGTAGAATAAAGACG
GATGAAGCTTTTGATTTTGATGTAGAATAGGAACTTTAATTAGTTTTGTATGAGTGGAAA
GACTCAGGATGTATATTAGAGTGTATTTCCAAGCTCTATTCTATGAAAGTTGATAGACTA
TCAAAAGAGGCTTATCATTTATTAGCATGTATAGCAAGAGGATAAATAGGTGGAGACAAG
AGTAAAGAAATGGAAAATGAAGAATAAGAGGATGAAAGCAAGAATGAAGGAAATAAATAA
GACAGAAACGATTAAAAAAAAAAGATAGTTTCATTTGAAGAAAAATAAATCTAACAAGGA
TCTTTTGAAAATTTTGATCCGTTTATTGCTGGTTAAAAGCAGATAGAAAAGCCAGAAAAA
TTAATTGTTGATAAGTATGATATTCTTTTTGATCTAGATCCTCTATTTAGGAAGAAAAGC
TAGTATTTTGACGATACTAGCTCGGAAGGTCTTCTTCTTAATGTACTGGAAGTAGATAAA
GAGCTTTGTATAAATTTGTCTGAATTAGATGAGGCATTGGGCAAATAGTAAAAATTAGTT
TAAAGAGATTAAAAAAAATAGACTAAGTCAAATTATATGAAATTATTCACTTAAGAAGAA
TTTAAAAATAAATTCTCAGCTCCTGTTGAAGATTAGATTATCGATTTATTTCCAGAATTA
ATTGATTTTAAGATGTCAGTGATTGACGAAGTTTCTTAATAATTGCTATTTGATAATATT
TAAAGTTTAAACTCTGAGAATGATATTAAGATTCTAACTCAAAATAATAAAAAAATGGAA
ATCATGGATGAAAATTCTGCTTCTATAGTCAATTAAGTGCTTTAAAATGAGAATGATAAA
ATTTTATTAAACGAAATAAACCTAGCATATTAAATGAATGCTTTTACCTCATAAAATTTT
ATGTACAGAAACCTGAGTGACGATTCATTGTTTCAAAATGCATCTCAGTCTTCATAAAAC
AAAGAAGATTTTATTTTATCATAAATGTCTTAAAGTTACACGCCTGATAACAGTATTTTT
AAGAACACAAAGCAGATAAGATTCGATTTGAATGACGAATACTAAGGTTTTGATTCTTCA
AATGACTATGCAAATTATCATGATGAAAATCCATCAACTTAAGAAACAAAGCAAATTGAT
AATTCTTTACTTCATAATTCTTTAAACAAAGTAGGAGGAGGAGATAAAACAATATTCTCT
AATTTTCTCATGAATTTAAATTGGGGAGACCCTAAGCAATGGGATATACAAAAGCTGAGT
GCTAATAAAAGGAAAAAAATACGTTCAAAAAAATTGTAAGATGATCTATTACTTGGAGAG
ATAAAGGAAGATATGGAAGCTGAAGAATAAAATGAAAACATAGCCATGAATAACCAGTAT
GAAAGATTAACGAAGCCACAAAAATATATTGATTTTAGCCTAAATAATGGAAAAGAAGAA
AGCTATAAAGAAGTAATAGGCAAGAAATTTTAGAGATATAAGAGTAATTTAGGATTAAAA
TATGTAAAAATAAAGTAGAAAAGTACTATTCAAAAAGATTATAAAATTACCAGTGAGCAA
GTATTCTAAATAGGTTTAAAATACATAGAAAATACAAAATAAAGTAGAATAAAGGAATTT
ACTAGTGAATATGACAGTTAATTTGATATATTTTAGTAGAGCTAATAGAATTAAAATACA
AGCTAAAATGCTATTAATTAAAATGATGAATATTAAAATGAGTACGAAGCTATTGGCTTT
GATGATTTATATGATGAAATGGATGATAGATTTTACAATCCTTAGAAGTATAATAATTAA
AGAGATAATAGATTTTTTAACACACAAAGAGAAGGCTAAAGTCAATTTGATATTTAAATG
AATAACTCACCATACGGAAGATATCAATACCCTTTCTCTGCTAATAATAATTCACAAAGT
CTCTACACTCAAAATAAAACCCAAAACTTTTTTTCATAAACTATAAAAAGAAAGCCTGTG
AGAATTAGAGATTTAAAAGAAACAGTATGGTAGACTATGACTTAATAGAAGAGCAAAGAA
AATAACAGCTAATTAACCTAATTAAGTTAAATTGTATAAGAAAATTAAAATAAAAGAGGA
AAAAGAAAAAATAAAGCCAAGCTATCTGAAAATGAAGAATAGGAGTAAATTGAAAGTGCG
ATTACTCAAATTAATAGTGAAGATGTTTCTCTCAAGTTTAGTGATTTAATGCATTAATTA
CCAAATTCTCTTGGATAAGATAATTAAGCTTAGGGAGTTTCAGTCTAGAATTGCTTTATT
AGCATACTGCATTTGGCAAACGAAAAACATCTTAGACTTGTTGATCCAAGTCACACTGAG
TTAGAATTTTTTATTTTCTTGGATTAAACATTACAAGAAAATGAAAACTCATAAAACCTT
AGACGAAGCAAAATTTAAGAATCTTGA


>TTHERM_00540340(gene)
ATTGACATTCTACCAAGTATTTATTTTTGTGATTTAAAAATACTTAATTAAATAAAATAA
TAAAATCTTAATTATTGCGCACTCTATTTTTTTTATCAGCTTATAAATCATAAATATTGA
TAGATAGATATACGCATTTAGTTAGCAAAAATAGTAAAGATGAATGCAAACAAAAAGCAA
ACAAAAATTAGAAGGGCAAAAAGCACTTTGAAGAGTTCTAGAAAGGAAAAATATAGCATA
GAAGATTTAGAAACAGAAAAGGAAAGTAACATATCATCTTATGATCTTGATTATTAGGAT
GATATTTGGGAGATTAATTCTAATTAAAAAGCAGCTGAAATATCTTTTTCTTAGAAAAAA
AATGTAAGTGTGAATAGCAGTCTTAAAGGGAGAAATAATAGTCAGCTAGTTAAATCTGAC
GATTTAGCTATGAAGACTTCTAATAAACCTATCAGGAGAGTTAACACAAGCATAAGCATG
AGTTAGAGCTCTGTATAAATATAGGATGAAAGCATAGATTTGGATGCTGAAAGCGATCAA
GAAAGTGATGATGATTCACATCTCACTCCAGAATAAAAATAACTAAAAGATAGATGGCTT
CAAATATTCCAAAAAATATCTAAAAGTAGAATAAAGACGGATGAAGCTTTTGATTTTGAT
GTAGAATAGGAACTTTAATTAGTTTTGTATGAGTGGAAAGACTCAGGATGTATATTAGAG
TGTATTTCCAAGCTCTATTCTATGAAAGTTGATAGACTATCAAAAGAGGCTTATCATTTA
TTAGCATGTATAGCAAGAGGATAAATAGGTGGAGACAAGAGTAAAGAAATGGAAAATGAA
GAATAAGAGGATGAAAGCAAGAATGAAGGAAATAAATAAGACAGAAACGATTAAAAAAAA
AAGATAGTTTCATTTGAAGAAAAATAAATCTAACAAGGATCTTTTGAAAATTTTGATCCG
TTTATTGCTGGTTAAAAGCAGATAGAAAAGCCAGAAAAATTAATTGTTGATAAGTATGAT
ATTCTTTTTGATCTAGATCCTCTATTTAGGAAGAAAAGCTAGTATTTTGACGATACTAGC
TCGGAAGGTCTTCTTCTTAATGTACTGGAAGTAGATAAAGAGCTTTGTATAAATTTGTCT
GAATTAGATGAGGCATTGGGCAAATAGTAAAAATTAGTTTAAAGAGATTAAAAAAAATAG
ACTAAGTCAAATTATATGAAATTATTCACTTAAGAAGAATTTAAAAATAAATTCTCAGCT
CCTGTTGAAGATTAGATTATCGATTTATTTCCAGAATTAATTGATTTTAAGATGTCAGTG
ATTGACGAAGTTTCTTAATAATTGCTATTTGATAATATTTAAAGTTTAAACTCTGAGAAT
GATATTAAGATTCTAACTCAAAATAATAAAAAAATGGAAATCATGGATGAAAATTCTGCT
TCTATAGTCAATTAAGTGCTTTAAAATGAGAATGATAAAATTTTATTAAACGAAATAAAC
CTAGCATATTAAATGAATGCTTTTACCTCATAAAATTTTATGTACAGAAACCTGAGTGAC
GATTCATTGTTTCAAAATGCATCTCAGTCTTCATAAAACAAAGAAGATTTTATTTTATCA
TAAATGTCTTAAAGTTACACGCCTGATAACAGTATTTTTAAGAACACAAAGCAGATAAGA
TTCGATTTGAATGACGAATACTAAGGTTTTGATTCTTCAAATGACTATGCAAATTATCAT
GATGAAAATCCATCAACTTAAGAAACAAAGCAAATTGATAATTCTTTACTTCATAATTCT
TTAAACAAAGTAGGAGGAGGAGATAAAACAATATTCTCTAATTTTCTCATGAATTTAAAT
TGGGGAGACCCTAAGCAATGGGATATACAAAAGCTGAGTGCTAATAAAAGGAAAAAAATA
CGTTCAAAAAAATTGTAAGATGATCTATTACTTGGAGAGATAAAGGAAGATATGGAAGCT
GAAGAATAAAATGAAAACATAGCCATGAATAACCAGTATGAAAGATTAACGAAGCCACAA
AAATATATTGATTTTAGCCTAAATAATGGAAAAGAAGAAAGCTATAAAGAAGTAATAGGC
AAGAAATTTTAGAGATATAAGAGTAATTTAGGATTAAAATATGTAAAAATAAAGTAGAAA
AGTACTATTCAAAAAGATTATAAAATTACCAGTGAGCAAGTATTCTAAATAGGTTTAAAA
TACATAGAAAATACAAAATAAAGTAGAATAAAGGAATTTACTAGTGAATATGACAGTTAA
TTTGATATATTTTAGTAGAGCTAATAGAATTAAAATACAAGCTAAAATGCTATTAATTAA
AATGATGAATATTAAAATGAGTACGAAGCTATTGGCTTTGATGATTTATATGATGAAATG
GATGATAGATTTTACAATCCTTAGAAGTATAATAATTAAAGAGATAATAGATTTTTTAAC
ACACAAAGAGAAGGCTAAAGTCAATTTGATATTTAAATGAATAACTCACCATACGGAAGA
TATCAATACCCTTTCTCTGCTAATAATAATTCACAAAGTCTCTACACTCAAAATAAAACC
CAAAACTTTTTTTCATAAACTATAAAAAGAAAGCCTGTGAGAATTAGAGATTTAAAAGAA
ACAGTATGGTAGACTATGACTTAATAGAAGAGCAAAGAAAATAACAGCTAATTAACCTAA
TTAAGTTAAATTGTATAAGAAAATTAAAATAAAAGAGGAAAAAGAAAAAATAAAGCCAAG
CTATCTGAAAATGAAGAATAGGAGTAAATTGAAAGTGCGATTACTCAAATTAATAGTGAA
GATGTTTCTCTCAAGTTTAGTGATTTAATGCATTAATTACCAAATTCTCTTGGATAAGAT
AATTAAGCTTAGGGAGTTTCAGTCTAGAATTGCTTTATTAGCATACTGCATTTGGCAAAC
GAAAAACATCTTAGACTTGTTGATCCAAGTCACACTGAGTTAGAATTTTTTATTTTCTTG
GATTAAACATTACAAGAAAATGAAAACTCATAAAACCTTAGACGAAGCAAAATTTAAGAA
TCTTGATTTATGAAGCTATATATTTTTGTTTATATTTAGACGATTTAATCTATAATTTTT
ATAAAAGAGTAAGCAAATTTTGAGAAATCAATGAAACTCCAGTCAAATAAAAAACAAACT
TGAATTAAAATTATGAGGAAAATGAGATATTATTTTGATATAATAAAAATCTGATCTATA
AAAACTTATTTTATTTACTAACACTCTTTACACACTATTATTAAAGCAATTATAATTTAA
TTAACTTAGTAATTAATTAATCAAAATTGAAAATAAAACATTCCATAGCCTTCTTGCTTG
ATAAAAACTAAATAAAATAATAATAAAAATACATTAATTTCTATCTATTTTACTTGTAAC
ATACAACTTATTTATTTATATAAAATCTACAATTTTCTTAATTATTCACCAATTAATGTT
GAGAAATTTTCTATTTTTGTATTTAATTTTTTATCTGTTTATTTGTGTATATCTAATTTA
GTGGTTAATATAAATCTTTTTACAATCAATTA


>TTHERM_00540340(protein)
MNANKKQTKIRRAKSTLKSSRKEKYSIEDLETEKESNISSYDLDYQDDIWEINSNQKAAE
ISFSQKKNVSVNSSLKGRNNSQLVKSDDLAMKTSNKPIRRVNTSISMSQSSVQIQDESID
LDAESDQESDDDSHLTPEQKQLKDRWLQIFQKISKSRIKTDEAFDFDVEQELQLVLYEWK
DSGCILECISKLYSMKVDRLSKEAYHLLACIARGQIGGDKSKEMENEEQEDESKNEGNKQ
DRNDQKKKIVSFEEKQIQQGSFENFDPFIAGQKQIEKPEKLIVDKYDILFDLDPLFRKKS
QYFDDTSSEGLLLNVLEVDKELCINLSELDEALGKQQKLVQRDQKKQTKSNYMKLFTQEE
FKNKFSAPVEDQIIDLFPELIDFKMSVIDEVSQQLLFDNIQSLNSENDIKILTQNNKKME
IMDENSASIVNQVLQNENDKILLNEINLAYQMNAFTSQNFMYRNLSDDSLFQNASQSSQN
KEDFILSQMSQSYTPDNSIFKNTKQIRFDLNDEYQGFDSSNDYANYHDENPSTQETKQID
NSLLHNSLNKVGGGDKTIFSNFLMNLNWGDPKQWDIQKLSANKRKKIRSKKLQDDLLLGE
IKEDMEAEEQNENIAMNNQYERLTKPQKYIDFSLNNGKEESYKEVIGKKFQRYKSNLGLK
YVKIKQKSTIQKDYKITSEQVFQIGLKYIENTKQSRIKEFTSEYDSQFDIFQQSQQNQNT
SQNAINQNDEYQNEYEAIGFDDLYDEMDDRFYNPQKYNNQRDNRFFNTQREGQSQFDIQM
NNSPYGRYQYPFSANNNSQSLYTQNKTQNFFSQTIKRKPVRIRDLKETVWQTMTQQKSKE
NNSQLTQLSQIVQENQNKRGKRKNKAKLSENEEQEQIESAITQINSEDVSLKFSDLMHQL
PNSLGQDNQAQGVSVQNCFISILHLANEKHLRLVDPSHTELEFFIFLDQTLQENENSQNL
RRSKIQES