Identifiers and Description

Gene Model Identifier

TTHERM_00561450

Standard Name

YAF9

Aliases

PreTt27906 | 74.m00183 | 3720.m00073

Description

YEATS domain protein putative; Member of the SWR complex. YEATS family protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Biological Process

• regulation of DNA-templated transcription (IEA) | GO:0006355

Domains

• ( PF03366 ) YEATS family
• ( PF07271 ) Cytadhesin P30/P32

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16137.1	6.999272261191859e-174
	Description: YEATS family protein (374 aa)
Tetrahymena borealis	EI9_20633.1	6.999272261191859e-174
	Description: hypothetical protein (597 aa)
Oxytricha	Contig5038.0.g103	2.998577119979921e-31
	Description: YEATS family
DictyBase	DDB_G0279563	9.995528898049344e-31
	Description: DDB_G0279563 on chromosome: 3 position 2264498 to 2265670
SGD	YNL107W	6.997498932278805e-30
	Description: YAF9 Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex, may function to antagonize silencing near telomeres; interacts directly with Swc4p, has homology to human leukemogenic protein AF9, contains a YEATS domain
WormBase	WBGene00001585	2.000620012690291e-23
	Description: locus:gfl-1 status:Confirmed UniProt:Q21501 protein_id:CAB01234.1
WormBase	WBGene00002169	2.000620012690291e-23
	Description: locus:isw-1 Chromatin-remodeling complex ATPase chain isw-1 status:Confirmed UniProt:P41877 protein_id:CCD70709.1
Stentor Coeruleus	SteCoe_17014	3.1391327920480296e-17
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00561450(coding)
ATGCAACTCAATACTTAGCTAAAATAGCAAACATTTTCAAAGCCTATAGTTTATGGAACT
ATATCTTATTCATTAGGAGCAAATAAAAAATAAACTGACAAAAATACTCATAGATGGTGC
GCTTATGTTAGAGGTCCTAACAACGAAGATTTATCTACTTTCATTGATAAGGTAGTTTTT
GTACTTCATGAGACTTTTACTGATCATCAGAGAGCTATTACAAAACCTCCATTTGAAGTA
GTAGAAAAAGGTTGGGGTGAATTCGATATATTAATTTAAATCCACTTTAAAACTCATTAT
CCTTAGCTCGAGCTTGTCCATAAACTCAAATTTTATGGAGCTAAATCTGGAGGTAATTCT
TAAAGTACAAAGAAGCCTGTTGTTTCAGAATTCTATGATGAAATAGTCTTTGTTAATCCC
AGCGTTGAATTTTATGATATGTTAAGAGTTGAGAAATATTTATAAAATGAAGAAAAGCTC
TCAAAGGAGTCAAAGGGTGAAGGTGATAATGCATAAATGGAAGAAGAGTAGCCAGCTGAA
AAAGAAGAAGAAGAATATTATGATTGGAAATAGCACTACTTGAAATTTGATGCTTAAGAT
CACAAGTAAAAGTTAGATGACGCTTTAGTAGTTATAAAAGAACAAAATGAAAAAACAAAA
ATGGATTTAGAAAAGTGTGATAAAGATATTGAAGCATTAAACAAGGAAATTGAATAATTA
TAAAAAGAACAAGATTTAAAATAAAAGAAGCTCTTAGAGGAATAGCAATTACAATAGCAA
TAATAATAGTAATAATCTTAGGATGGAAATTAATTCTCATATCCAACTCCTAATTTCTAA
AACCCATAAAGTTAATCACAAATAAATGAATTCCCTAACGAATAGATTAGAAGCATACCT
TCTACTCCTTCAAATATCCAACAACAACCTCCCAACATACCTATTTAAAACATAGCTCCT
CCACCTCAAATGCAAAACTAATATAATCCTCCAAATTAGTATCCAATGGGATAACCACCT
GCAGCTCCCATGCCATAATAATAAGGACCTCCTCCTCCTTTAAACATGATGCCAAATAGT
TATGCTCCTCCTAATCCAAATATTAAAATGAATAACCCATATCAATAACCACCACCCAAT
ATGCCTATGTGA

>TTHERM_00561450(gene)
ATGCAACTCAATACTTAGCTAAAATAGCAAACATTTTCAAAGCCTATAGTTTATGGAACT
ATATCTTATTCATTAGGAGCAAGTAAAAATTTACTTTAGTGCACTAAATAAAAATATTAA
ATGGAGCTTTTGTTATTTTTTAGCATTTGAAATTAATATTTACCAACAAGAATGATTTAG
AAAATGTCTTAAATAATTATTTGTCTTTAAATTAGATAAAAAATAAACTGACAAAAATAC
TCATAGATGGTGCGCTTATGTTAGAGGTCCTAACAACGAAGATTTATCTACTTTCATTGA
TAAGGTAGTTTTTGTACTTCATGAGACTTTTACTGATCATCAGAGAGGTAAAAATTTAAT
TTAAAAAATCACAAACAAGCTGAAAATATTTTTTGAAATTAGCTATTACAAAACCTCCAT
TTGAAGTAGTAGAAAAAGGTTGGGGTGAATTCGATATATTAATTTAAATCCACTTTAAAA
CTCATTATCCTTAGCTCGAGCTTGTCCATAAACTCAAAGTATACTTATTCATTTTAAACA
AAAGTAAATTTATTGATTTCAAAACAGTTTTATGGAGCTAAATCTGGAGGTAATTCTTAA
AGTACAAAGAAGCCTGTTGTTTCAGAATTCTATGATGAAATAGTCTTTGTTAATCCCAGC
GTAAATTGCGTTTAATTTATCTAAAAAGAATTCAATAACTTAAAAGATATCCTTTGTTCT
AAGAGATAAAGGATACTATCCAAAAACTTAACCAAGATGATTCATTCATTCATTTTGATT
TTAATACAAACTAAATACACAAACTATATTAGAGTTTATTTGCTTATTCAAAAATTTGAT
TGTTAAAAATAGGTTGAATTTTATGATATGTTAAGAGTTGAGAAATATTTATAAAATGAA
GAAAAGCTCTCAAAGGAGTCAAAGGGTGAAGGTGATAATGCATAAATGGAAGAAGAGTAG
CCAGCTGAAAAAGAAGAAGAAGAATATTATGATTGGAAATAGCACTACTTGAAATTTGAT
GCTTAAGATCACAAGTAAAAGTTAGATGACGCTTTAGTAGTTATAAAAGAACAAAATGAA
AAAACAAAAATGGATTTAGAAAAGTGTGATAAAGATATTGAAGCATTAAACAAGGAAATT
GAATAATTATAAAAAGAACAAGATTTAAAATAAAAGAAGCTCTTAGAGGAATAGCAATTA
CAATAGCAATAATAATAGTAATAATCTTAGGATGGAAATTAATTCTCATATCCAACTCCT
AATTTCTAAAACCCATAAAGTTAATCACAAATAAATGAATTCCCTAACGAATAGATTAGA
AGCATACCTTCTACTCCTTCAAATATCCAACAACAACCTCCCAACATACCTATTTAAAAC
ATAGCTCCTCCACCTCAAATGCAAAACTAATATAATCCTCCAAATTAGTATCCAATGGGA
TAACCACCTGCAGCTCCCATGCCATAATAATAAGGACCTCCTCCTCCTTTAAACATGATG
CCAAATAGTTATGCTCCTCCTAATCCAAATATTAAAATGAATAACCCATATCAATAACCA
CCACCCAATATGCCTATGTGA

>TTHERM_00561450(protein)
MQLNTQLKQQTFSKPIVYGTISYSLGANKKQTDKNTHRWCAYVRGPNNEDLSTFIDKVVF
VLHETFTDHQRAITKPPFEVVEKGWGEFDILIQIHFKTHYPQLELVHKLKFYGAKSGGNS
QSTKKPVVSEFYDEIVFVNPSVEFYDMLRVEKYLQNEEKLSKESKGEGDNAQMEEEQPAE
KEEEEYYDWKQHYLKFDAQDHKQKLDDALVVIKEQNEKTKMDLEKCDKDIEALNKEIEQL
QKEQDLKQKKLLEEQQLQQQQQQQQSQDGNQFSYPTPNFQNPQSQSQINEFPNEQIRSIP
STPSNIQQQPPNIPIQNIAPPPQMQNQYNPPNQYPMGQPPAAPMPQQQGPPPPLNMMPNS
YAPPNPNIKMNNPYQQPPPNMPM