Identifiers and Description

Gene Model Identifier

TTHERM_00563990

Standard Name

HMGB5 (HMG box protein)

Aliases

PreTt08937 | 75.m00135 | 3721.m00017

Description

HMGB5 HMG box protein; HMG box family protein; High mobility group box domain superfamily

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

  • ( SD03313 ) Macronucleus: none
  • ( SD03314 ) Macronucleus: none
  • ( SD03315 ) Macronucleus: TTHERM_00563990[Δ::NEO2]

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:31932604: Nabeel-Shah S, Ashraf K, Saettone A, Garg J, Derynck J, Lambert JP, Pearlman RE, Fillingham J (2020) Nucleus-specific linker histones Hho1 and Mlh1 form distinct protein interactions during growth, starvation and development in Tetrahymena thermophila. Scientific reports 10(1):168

Sequences 

>TTHERM_00563990(coding)
ATGATAGCTCGTTCACTTTTCTAGACTAATAAATATTTTGCAAGTAAATTTTAACTTTTA
ACATTCCGTGATAATAAGTATGCGATTCCTAGCCCTCCTTCTAGGCCTGCATTTGCTTAA
ACTATCTTTAATCAACTTTTAAGAAACAAAGCAAAAGAAATTGGTTAGAAATAAGCAGAT
ATTAAGAAGAATGAACAATTATTTAAGTAATTAACAGAATAAGCGAAGGTTGAAAGAGAA
AATGCTTTAAAAAACTATGAAACAAGTCTTAAAGAATATGAAGCTAAATTCAGTATACCT
AAAAGGATTAAACCCGCCTTTTTCTATTACTATTTAGAAAAATACGATAAGACTGAAAAG
TTAACAGAAAGTGTGAAAAGGCTAAGTAAAGAATTCAAATAACTTTCTGAATAAGAACAG
AAGATATATAAAGAAAAAGCCGCTGAAGATAAAAAAAGATATTAAGATGAATGCGAAAAA
TTTGTAAAGCAGCATTAGGATTTAATAGTTCCATCATTGTATCCTTTGTAACCATTATCT
TTGTATGTTTCTGAATAATTTTCATAGAATCCTCAATCAACATTGAAAAAAATTGCATCA
TCTTGGAAATAGCTAAGCGAGGAATAAAAGAAATAATATGAAGAAAAGGTAATCAAAATT
AATGAAGAGTAGAAGTAAAAACTTGCTGAATTCTAAAAAAAGAATAATTTATCAGATGAA
GATATTAAGAATTTCAAGAAGAGAAAGCAAAGATCTAAATCTGTTGAATAAAAAGAAAGT
CAGAGCTAATGA



>TTHERM_00563990(gene)
TAAGTAGTATTGTATTTTCGATTGTGTTTTTAGGAAAAAACATTTATACAAAATAAAATA
AAAATAAAAAGTTATTAAAAGCAAATAAGAAGAACTATGATAGCTCGTTCACTTTTCTAG
ACTAATAAATATTTTGCAAGTAAATTTTAACTTTTAACATTCCGTGATAATAAGTATGCG
ATTCCTAGCCCTCCTTCTAGGCCTGCATTTGCTTAAACTATCTTTAATCAACTTTTAAGA
AACAAAGCAAAAGAAATTGGTTAGAAATAAGCAGATATTAAGAAGAATGAACAATTATTT
AAGTAATTAACAGAATAAGCGAAGGTTGAAAGAGAAAATGCTTTAAAAAACTATGAAACA
AGTCTTAAAGAATATGAAGCTAAATTCAGTATACCTAAAAGGATTAAACCCGCCTTTTTC
TATTACTATTTAGAAAAATACGATAAGACTGAAAAGTTAACAGAAAGTGTGAAAAGGCTA
AGTAAAGAATTCAAATAACTTTCTGAATAAGAACAGAAGATATATAAAGAAAAAGCCGCT
GAAGATAAAAAAAGATATTAAGATGAATGCGAAAAATTTGTAAAGCAGCATTAGGATTTA
ATAGTTCCATCATTGTATCCTTTGTAACCATTATCTTTGTATGTTTCTGAATAATTTTCA
TAGAATCCTCAATCAACATTGAAAAAAATTGCATCATCTTGGAAATAGCTAAGCGAGGAA
TAAAAGAAATAATATGAAGAAAAGGTAATCAAAATTAATGAAGAGTAGAAGTAAAAACTT
GCTGAATTCTAAAAAAAGAATAATTTATCAGATGAAGATATTAAGAATTTCAAGAAGAGA
AAGCAAAGATCTAAATCTGTTGAATAAAAAGAAAGTCAGAGCTAATGATGAAATAAAATC
AAATTATTAATAAACTCCTAAACAATTAAATGTTTTATATTTACAATATTCATTGTTTGA
AGCACATGCTA



>TTHERM_00563990(protein)
MIARSLFQTNKYFASKFQLLTFRDNKYAIPSPPSRPAFAQTIFNQLLRNKAKEIGQKQAD
IKKNEQLFKQLTEQAKVERENALKNYETSLKEYEAKFSIPKRIKPAFFYYYLEKYDKTEK
LTESVKRLSKEFKQLSEQEQKIYKEKAAEDKKRYQDECEKFVKQHQDLIVPSLYPLQPLS
LYVSEQFSQNPQSTLKKIASSWKQLSEEQKKQYEEKVIKINEEQKQKLAEFQKKNNLSDE
DIKNFKKRKQRSKSVEQKESQSQ