Identifiers and Description

Gene Model Identifier

TTHERM_00569290

Standard Name

LIA2 (localized in macronuclear anlagen 2)

Aliases

PreTt10459 | 76.m00161 | 3810.m02020 | DRH3 | g15804

Description

LIA2 DEAD/DEAH-box helicase; DEAD/DEAH box helicase domain

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00270 ) DEAD/DEAH box helicase
  • ( PF00271 ) Helicase conserved C-terminal domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:27892853: Hamilton EP, Kapusta A, Huvos PE, Bidwell SL, Zafar N, Tang H, Hadjithomas M, Krishnakumar V, Badger JH, Caler EV, Russ C, Zeng Q, Fan L, Levin JZ, Shea T, Young SK, Hegarty R, Daza R, Gujja S, Wortman JR, Birren BW, Nusbaum C, Thomas J, Carey CM, Pritham EJ, Feschotte C, Noto T, Mochizuki K, Papazyan R, Taverna SD, Dear PH, Cassidy-Hanley DM, Xiong J, Miao W, Orias E, Coyne RS (2016) Structure of the germline genome of Tetrahymena thermophila and relationship to the massivel
  2. Ref:27793833: McDaniel SL, Zweifel E, Harris PK, Yao MC, Cole ES, Chalker DL (2016) DRH1, a p68-related RNA helicase gene, is required for chromosome breakage in Tetrahymena. Biology open 5(12):1790-1798
  3. Ref:17519286: Yao MC, Yao CH, Halasz LM, Fuller P, Rexer CH, Wang SH, Jain R, Coyne RS, Chalker DL (2007) Identification of novel chromatin-associated proteins involved in programmed genome rearrangements in Tetrahymena. Journal of cell science 120(Pt 12):1978-89

Sequences 

>TTHERM_00569290(coding)
ATGTGGGGAAATAGCTACAATAATAATAGTTCTAGTAATGGATACTCAAATAACAAAAGC
AACGGATATTCAAGCAGCAATAATAATGGAAACTCCTATGGAACCGGTGGCAAGTGGAAT
GATAACGGAGTTGGTTAAAATTTGGCTGCAATCGATTGGACAAAAGAAAATCTTACTACA
TTTTAGAAAGTTTTTTATAAGGAAAGTTAGAAAATAAGAACTGAAGAAGAAATCGAAGAA
TTTTACCGCCAGAACCACATCTCAGCCAAATCACCTCATGGAAAAGTACCTGACCCTTTT
TTAAGCTGGACAGATACTCACTTCCCTTAATATATTATGAATGAAGTTACTCACGCTAAA
TTTGAAAAACCCTCTCCTATTTAGTCTTTAGCATTCCCTGTAGTCCTTAGTGGTCACGAT
TTGATTGGTATTGCAGAAACAGGTAGTGGAAAAACTCTTTCCTTCCTTTTACCCTCAATA
GTTCATATTAATGCTCAACCAACTGTCAAAAAGGGAGATGGTCCTATCGTCCTCGTTCTT
GCTCCTACTAGAGAACTTGCTATGCAAATCGAAAGAGAGTCCGAAAGATTTGGTAAATCC
TCTAAGCTTAAATGTGCTTGTATCTATGGTGGTGCTGACAAATACTCCTAAAGAGCACTT
CTCCAATAAGGTGTAGATGTAGTTATTGCTACTCCTGGTAGACTTATTGACTTTTTAGAA
AGTGAAACTACTACTTTACGTAGAGTTACTTATCTCGTATTAGATGAAGCAGATAGAATG
TTAGATATGGGTTTTGAAATTTAAATTAGAAAAATCTTGGGTTAAATTAGACCTGATCGT
TAAACATTGATGTTTTCTGCTACCTGGCCTAAGAATGTTTAGAATCTTGCTTAAGATTAT
TGCAAGAATACTCCCGTTTATGTTCAAATCGGAAAACATGAATTAGCTATTAACGAAAGA
ATTAAATAAATTGTTTATGTTACAGATCAATCAAAGAAAATCAATCAACTTATCAAGCAA
TTAGATTGTTTGACTTAGAAAGATAAAGTATTGATTTTCGCTTAAACAAAGAAGGGATGT
GAAAGCATGAGTCGTATTTTGAATAAAGAAGGATTTAAGTGTCTTGCTATCCATGGTGAC
AAAGCCTAAAAAGACAGAGACTATGTTATGAACAAGTTCAAAAGCGGAGAATGCAGAATC
CTTATTGCTACAGACGTAGCCAGTAGAGGTTTGGATGTTAAGGATGTCTCCCACGTATTT
AATTACGATTTCCCAAAGGTTATGGAAGACTATGTCCATAGAATCGGTAGAACAGGTAGA
GCTGGAGCATATGGTTGTGCAGTATCTTTCCTTACTTTTGAAGATGATAAAAAGATATCA
AGGGAATATGTCCAAATGCTTCATGACGCTAAGTAAGAAATTCCCATTGATCTTCTTGAT
CTTGCTAGTATTAATCCCAGATACAGAACTTAATATAAAACTGTTTCCTCTTCATACTAT
GATATTAAGAAATTTAACAGTGCTGATACTTCAAAGCCTTCAGAAAATCAGAATGTTTCA
AATACTGCAAATAGCAGCGACAAGTACACCAGCAGTAGCAGCTACAATTAATATAAAAGC
AAAAAAGATGAAGATGACAAGAGAAGTAGAAGTAGAAGTCCATATAAATCTGAAAATAAC
AACAGATGGGATAAATATAATCGCACAAAAAGCCCAGAATACCGCAGTTCTAATGGATCT
TCTCATTATAACAACGTTAACAAGTATTCTTCAAATTCTAATAATAATTCAAGTTCATAT
TCAAAGAATTAATCCTCCACATCATCATCTTCTTCCTATGGATAGAATAATTAATCATCC
AATTTAATGAGTAAACCATCTAGTAAATTCTCTGCTCCTACAAATGGTAGTTACACAAAT
GGATTTTCTTCAGTCTAATAAAATTCTCAAGTTTAAAATCCATTTATGCCAATCAATCCT
TTACCTCAACCTTTTATGTACTAAATTCCTGGATTTAATGGTTTCCCTAATCAAGGTTTC
AATAACTTTTACACTGGTATGGTTCCTCCTCCTCCACTCCCTACTGGTGCTCCCTCATAA
TAATAAAATGGATTTGCTTAAAATACAACAACATCTTCTTGA



>TTHERM_00569290(gene)
CATATAGTATAATATATAGTGTCGTGAATTTATAACACAGTAGGGAGATATGATTCAATT
AATAGTGTCTTTTTTAGAAGTAATATTGGGAGCTTAAAAATAAAAAGAAATAGATCCGAA
TTTAATAATTTGTAATTATCTAAAAAGAATTTTAATAGAAATAATTAATTAATTAATAAA
TAAATAATAAGAACGATACAAATAACATTCAATTAAATTAAGAAAGATAAAGCAGTACAT
CAAAAAAGTAAAATGTGGGGAAATAGCTACAATAATAATAGTTCTAGTAATGGATACTCA
AATAACAAAAGCAACGGATATTCAAGCAGCAATAATAATGGAAACTCCTATGGAACCGGT
GGCAAGTGGAATGATAACGGAGTTGGTTAAAATTTGGCTGCAATCGATTGGACAAAAGAA
AATCTTACTACATTTTAGAAAGTTTTTTATAAGGAAAGTTAGAAAATAAGAACTGAAGAA
GAAATCGAAGAATTTTACCGCCAGAACCACATCTCAGCCAAATCACCTCATGGAAAAGTA
CCTGACCCTTTTTTAAGCTGGACAGATACTCACTTCCCTTAATATATTATGAATGAAGTT
ACTCACGCTAAATTTGAAAAACCCTCTCCTATTTAGTCTTTAGCATTCCCTGTAGTCCTT
AGTGGTCACGATTTGATTGGTATTGCAGAAACAGGTAGTGGAAAAACTCTTTCCTTCCTT
TTACCCTCAATAGTTCATATTAATGCTCAACCAACTGTCAAAAAGGGAGATGGTCCTATC
GTCCTCGTTCTTGCTCCTACTAGAGAACTTGCTATGCAAATCGAAAGAGAGTCCGAAAGA
TTTGGTAAATCCTCTAAGCTTAAATGTGCTTGTATCTATGGTGGTGCTGACAAATACTCC
TAAAGAGCACTTCTCCAATAAGGTGTAGATGTAGTTATTGCTACTCCTGGTAGACTTATT
GACTTTTTAGAAAGTGAAACTACTACTTTACGTAGAGTTACTTATCTCGTATTAGATGAA
GCAGATAGAATGTTAGATATGGGTTTTGAAATTTAAATTAGAAAAATCTTGGGTTAAATT
AGACCTGATCGTTAAACATTGATGTTTTCTGCTACCTGGCCTAAGAATGTTTAGAATCTT
GCTTAAGATTATTGCAAGAATACTCCCGTTTATGTTCAAATCGGAAAACATGAATTAGCT
ATTAACGAAAGAATTAAATAAATTGTTTATGTTACAGATCAATCAAAGAAAATCAATCAA
CTTATCAAGCAATTAGATTGTTTGACTTAGAAAGATAAAGTATTGATTTTCGCTTAAACA
AAGAAGGGATGTGAAAGCATGAGTCGTATTTTGAATAAAGAAGGATTTAAGTGTCTTGCT
ATCCATGGTGACAAAGCCTAAAAAGACAGAGACTATGTTATGAACAAGTTCAAAAGCGGA
GAATGCAGAATCCTTATTGCTACAGACGTAGCCAGTAGAGGTTTGGATGTTAAGGATGTC
TCCCACGTATTTAATTACGATTTCCCAAAGGTTATGGAAGACTATGTCCATAGAATCGGT
AGAACAGGTAGAGCTGGAGCATATGGTTGTGCAGTATCTTTCCTTACTTTTGAAGATGAT
AAAAAGATATCAAGGGAATATGTCCAAATGCTTCATGACGCTAAGTAAGAAATTCCCATT
GATCTTCTTGATCTTGCTAGTATTAATCCCAGATACAGAACTTAATATAAAACTGTTTCC
TCTTCATACTATGATATTAAGAAATTTAACAGTGCTGATACTTCAAAGCCTTCAGAAAAT
CAGAATGTTTCAAATACTGCAAATAGCAGCGACAAGTACACCAGCAGTAGCAGCTACAAT
TAATATAAAAGCAAAAAAGATGAAGATGACAAGAGAAGTAGAAGTAGAAGTCCATATAAA
TCTGAAAATAACAACAGATGGGATAAATATAATCGCACAAAAAGCCCAGAATACCGCAGT
TCTAATGGATCTTCTCATTATAACAACGTTAACAAGTATTCTTCAAATTCTAATAATAAT
TCAAGTTCATATTCAAAGAATTAATCCTCCACATCATCATCTTCTTCCTATGGATAGAAT
AATTAATCATCCAATTTAATGAGTAAACCATCTAGTAAATTCTCTGCTCCTACAAATGGT
AGTTACACAAATGGATTTTCTTCAGTCTAATAAAATTCTCAAGTTTAAAATCCATTTATG
CCAATCAATCCTTTACCTCAACCTTTTATGTACTAAATTCCTGGATTTAATGGTTTCCCT
AATCAAGGTTTCAATAACTTTTACACTGGTATGGTTCCTCCTCCTCCACTCCCTACTGGT
GCTCCCTCATAATAATAAAATGGATTTGCTTAAAATACAACAACATCTTCTTGAAAACAA
AAAATATAATTTTTTATGATTATTAAAACTAATTTATATATCAGCAATTATTTGAAATAA
ATAAATAAATAATTTTTATAAATTAAACAAATATTAACTGGATTTTAACATAAATTTCAA
TTACCTTTTATAAAAATATTCACTTTGTATTTCTTCTTTAAATGGTTAACCACTAAA



>TTHERM_00569290(protein)
MWGNSYNNNSSSNGYSNNKSNGYSSSNNNGNSYGTGGKWNDNGVGQNLAAIDWTKENLTT
FQKVFYKESQKIRTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMNEVTHAK
FEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVL
APTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLE
SETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDY
CKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIKQLDCLTQKDKVLIFAQTKKGC
ESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASRGLDVKDVSHVF
NYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKISREYVQMLHDAKQEIPIDLLD
LASINPRYRTQYKTVSSSYYDIKKFNSADTSKPSENQNVSNTANSSDKYTSSSSYNQYKS
KKDEDDKRSRSRSPYKSENNNRWDKYNRTKSPEYRSSNGSSHYNNVNKYSSNSNNNSSSY
SKNQSSTSSSSSYGQNNQSSNLMSKPSSKFSAPTNGSYTNGFSSVQQNSQVQNPFMPINP
LPQPFMYQIPGFNGFPNQGFNNFYTGMVPPPPLPTGAPSQQQNGFAQNTTTSS