Identifiers and Description

Gene Model Identifier

TTHERM_00575350

Standard Name

TBP1 (TATA-Binding Protein )

Aliases

TATA-binding protein | PreTt28925 | 77.m00137 | 3812.m02620

Description

TBP1 TATA box-binding protein (TBP): present in archaea and protein; TATA-binding protein; component of the basal transcription apparatus; found in macronuclei throughout life cycle, but only found in micronuclei early in conjugation; TATA-box binding protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Biological Process

Domains

  • ( PF00352 ) Transcription factor TFIID (or TATA-binding protein, TBP)

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

  • ( SD02729 ) Macronucleus: Partial Neo KO of TBP1

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:9115421: Tsukiyama T, Wu C (1997) Chromatin remodeling and transcription. Current opinion in genetics & development 7(2):182-91
  2. Ref:8756729: Shen X, Gorovsky MA (1996) Linker histone H1 regulates specific gene expression but not global transcription in vivo. Cell 86(3):475-83
  3. Ref:7579709: Lu MJ, Mpoke SS, Dadd CA, Allis CD (1995) Phosphorylated and dephosphorylated linker histone H1 reside in distinct chromatin domains in Tetrahymena macronuclei. Molecular biology of the cell 6(8):1077-87
  4. Ref:8264641: Stargell LA, Gorovsky MA (1994) TATA-binding protein and nuclear differentiation in Tetrahymena thermophila. Molecular and cellular biology 14(1):723-34
  5. Ref:8177745: Liu X, Gorovsky MA (1993) Mapping the 5' and 3' ends of Tetrahymena thermophila mRNAs using RNA ligase mediated amplification of cDNA ends (RLM-RACE). Nucleic acids research 21(21):4954-60

Sequences 

>TTHERM_00575350(coding)
ATGAGCAGCGATAAAACATCTCAGCAGACTTTTAAGTTAGCACCAAACAATAGCGTCGCT
TAGAGCAATAGCATAGACCAAAATAAAAATAAAAACAATATCCTTAGCACTATAGAAACG
ATGGATAAGAGCATAAGTGAAGATTTATACCCAAAATTGTAGAATATTGTTTCCACTGTA
AATCTTAGTACAAAATTAGATTTAAAGCAAATAGCTCTTAGAGCCAGAAATGCTGAATAC
AATCCTAAAAGATTTGCTGCAGTAATTATGAGATTGAGAGATCCTAAAACTACAGCTCTG
ATTTTTGCTTCTGGTAAAATGGTGTGTACGGGTGCAAAAACAGAAGAAGATTCTAATAGA
GCTGCAAGAAAGTATGCTAAGATTATCTAAAAAATAGGTTTCCCCGTACAGTTCAAAGAT
TTTAAAATATAAAATATAGTAGGATCGACTGATGTAAAATTCCCCATCAATCTTGACCAT
CTTGAATAAGACCATAAAAAGTTCGTTTAGTATGAACCTGAAATTTTCCCTGGCTTGATT
TATCGTGAATTTAATACAAAAATAGTTCTCTTAATCTTCGTATCAGGTAAAATTGTACTG
ACAGGTGCAAAAACTAGAGAAAATATTAACAAAGCTTTCTAAAAAATATATTGGGTTTTG
TACAATTACTAGAAAAAAGACTATAGAGGTGCAAATCTTCATAATTAAAATTTAAATATT
AAACCTAGTATAAAAAATTGA



>TTHERM_00575350(gene)
ATAAATACAAATAAAAGAAAATATATAAATTAATCAAAATCAAATAATTCTAAATTAAGA
AATCAAGCAAGACACTTTTCATCACTTAAAGCAATCAATTATTTATTACAAAGAAATCTC
ATTCTCTATAAATCAATTATTTCTTTTAAAACTTAATAACTTGAAACCCAAAAAACAAAC
ATAGATAGATACATAGATACAAAGAAAGATAGAAAGATAAAGCAAAAGGGATTACACCTG
CACTGAAAACCAAACAAAATTCTACTTAAGAATAATAAGCTTTAAATACTTTTCATAATA
GACATAATAAAAGCAAATTAATACAAGAAAATAATAAATTACATTATTTAGATCATAATG
AGCAGCGATAAAACATCTCAGCAGACTTTTAAGTTAGCACCAAACAATAGCGTCGCTTAG
AGCAATAGCATAGACCAAAATAAAAATAAAAACAATATCCTTAGCACTATAGAAACGATG
GATAAGAGCATAAGTGAAGATTTATACCCAAAATTGTAGAATATTGTTTCCACTGTAAAT
CTTAGTACAAAATTAGATTTAAAGCAAATAGCTCTTAGAGCCAGAAATGCTGAATACAAT
CCTAAAAGATTTGCTGCAGTAATTATGAGATTGAGAGATCCTAAAACTACAGCTCTGATT
TTTGCTTCTGGTAAAATGGTGTGTACGGGTGCAAAAACAGAAGAAGATTCTAATAGAGCT
GCAAGAAAGTATGCTAAGATTATCTAAAAAATAGGTTTCCCCGTACAGTTCAAAGATTTT
AAAATATAAAATATAGTAGGATCGACTGATGTAAAATTCCCCATCAATCTTGACCATCTT
GAATAAGACCATAAAAAGTTCGTTTAGTATGAACCTGAAATTTTCCCTGGCTTGATTTAT
CGTGAATTTAATACAAAAATAGTTCTCTTAATCTTCGTATCAGGTAAAATTGTACTGACA
GGTGCAAAAACTAGAGAAAATATTAACAAAGCTTTCTAAAAAATATATTGGGTTTTGTAC
AATTACTAGAAAAAAGACTATAGAGGTGCAAATCTTCATAATTAAAATTTAAATATTAAA
CCTAGTATAAAAAATTGATCACTGAATTCTATATTTGATAAGAACGTATGCATTAATTAA
TTCATACAAATACCATATTATAAATTAATTAATAAATAAATAAATTAGTAATAAAAGGAT
TAAAATAATAATTTAATTGTGCTAAATTTTAAACCTTAAAACTCGATTTAATTTCAAAAT
AAATAAATAAATAAATAACACTATTATTCAAATTAAAAGTTTAATTTTACTTATTTTATC
TAAAAATAATTATTTTAGTATATTTTAATATTAATTAATTAATAAAATAAATTACTCTAT
CTAATTTTTATATGATTATTTTATACTTAATAATTTAAAAATAATATTTAATAAAAAA



>TTHERM_00575350(protein)
MSSDKTSQQTFKLAPNNSVAQSNSIDQNKNKNNILSTIETMDKSISEDLYPKLQNIVSTV
NLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMVCTGAKTEEDSNR
AARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKFVQYEPEIFPGLI
YREFNTKIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQKKDYRGANLHNQNLNI
KPSIKN