Identifiers and Description

Gene Model Identifier

TTHERM_00578640

Standard Name

RPL13 (Ribosomal protein of the large subunit)

Aliases

78.m00129 | PreTt05757 | 3733.m00024

Description

RPL13 60S ribosomal protein L13; Homolog of yeast RPL13/(RPL13e)

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF01294 ) Ribosomal protein L13e

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16289.1	1.9990002532767049e-131
	Description: ribosomal protein L13e containing protein (205 aa)
Tetrahymena borealis	EI9_18320.1	1.9990002532767049e-131
	Description: myristoyl-CoA:protein N-myristoyltransferase domain-containing protein (423 aa)
Oxytricha	Contig4065.0.1.g96	3.000458792073453e-56
	Description: Ribosomal protein L13e
DictyBase	DDB_G0291870	2.9993743585281133e-40
	Description: rpl13 on chromosome: 6 position 852689 to 853474
WormBase	WBGene00004425	7.003455847728069e-40
	Description: locus:rpl-13 60S ribosomal protein L13 status:Confirmed UniProt:P91128 protein_id:CCD66399.1
SGD	YDL082W	5.002276765025871e-34
	Description: RPL13A Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp; not essential for viability; has similarity to rat L13 ribosomal protein
Stentor Coeruleus	SteCoe_23192	2.1151310375910805e-19
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00578640(coding)
ATGAAGCACAACAATCAATTACCCGTTGCCTAATTAAGAAAGCATTAATAATTCAGAATT
AAAACTTTCTTCAACCAAGCTGCCTAAAAGAAGGCTAGATTACATGCCAGAAGAGCTTAA
GCCGCCGCTGTCTTCCCCAGACCTACTGAAAAGTTACAACCTGTTGTTAGAAAGCAAACC
CAAAGATACAACAAGTCCACCAAGCTCGGAAGAGGTTTCACCTTACAAGAATTGAAGGCT
GCCGGTATCTCTGCCGCTTTTGCCTAATCTATTGGTATCAAGGTTGACCACAGAAGAAAG
AACAGATGTCAAGAATCTCTTGAATTAAACAAGAAGAGACTTTTGGCTTACGTTAGCAAG
CTCGTTCTCTTCCCTAGACACTAAGGTAAGGCCAAGAAGGGTTTAGTTAATGACACCGCT
GACACCAGCAGTGCTGCTCAAAACGCCTTATAAACCTCTGTTCCTCTTCCCTCTGTCTCC
AAGAGAGAAAAGGCTGTTTCCAACATCGCTGAACTCAGAAAGAAGAAGGTTTACAGAATC
ATCAGACAAGAAAAGACCAACCAAAAGTGGGATGGAAAGAGAAAGGCTAAAGCTCAAGCT
GCCGCTGAACCCAAGGCATGA

>TTHERM_00578640(gene)
ATGAAGCACAACAATCAATTACCCGTTGCCTAATTAAGAAAGCATTAATAATTCAGAATT
AAAACTTTCTTCAACCAAGCTGCCTAAAAGAAGGCTAGATTACATGCCAGAAGAGCTTAA
GCCGCCGCTGTCTTCCCCAGACCTACTGAAAAGTTACAACCTGTTGTTAGAAAGCAAACC
CAAAGGTGAATATCTATCATTCAATCCAAATTAAATCACAAACCGATCACCATTTTTTTC
TTAAAAATTATTGATTCAAAATACAAATATGCATTTTACTTTTTCATTTTACAATTTCCA
TCGAACTCTAAAAGATGGGACAGCTTCCCATGCAATTGTATTTTTTTACAGTTCGTTTTA
ACCAAATAAATGCTGGTCAATCGCTCAGTCAATAAATCAATCAATTAAAGAGTCAATTAA
ATAAAAAAATCACTAGAATTAGGGTAACTTAATCGAATAGATATTTCATTCTTAAGTTAG
CAGATGAATTTAAAATTGTAATAGAAATATAATTAAATGCGGAATACTTTTTAACAAAAT
GGAATTCAATCATAACCTGTATTGCGGAAATCTAGTAAAGTAGATTTAGCTTCTGATTTA
TCTGATTGTTAGATTTGAAATATCATCAGCCTTTAATTAGGTTTTAACTAAATAAATGTA
AATAACACAATTTAGGTATTCTAAAACTTCTCAATAAAGAATATAATCAGTAGACATTAT
GCCAACATATTTAGCAAAGAATATAAAAGCAATTTATGTATACAGTAGATCGATTAATTG
ATTAGGTAGGGAGTCTTAGCGTCAATCAAAGATCAAGTAGATCATTTGGTTTCTAATAAA
TTTAAGCAAGCTAAATTATAAAATATCTAAATACAAATTTAAAAAGACGAAATTATCAAA
ACTCATAAATGAATGATGATGAAATAATTTAAATAGAGCAACTTGTAATATTTGTTCAAT
GAAAAAAAAATATGCAAAATAAAGCCGCCAAATATTTAAAAATTTAGGCATGTTAGGGTA
CATTAAATACTCATTTATCAAAACTCAAATAAACCTTATTGATTGAATGAAATAATTACT
TGCATAATAATTAAAATTGATTGATTCATGATAATGACTGTTTAATTGATTGATTGAAGC
TGAAATATTTAGGAATTGAATATAATTGTAAAAACAATTTAAATTCTACAAAAAAGTTTA
ATAAGGTTAAAACTAAAAGTAAATATAATCCATTCATTTAAAGTTTAATCTTTAAATTAA
GTGAAATCATGCATATTATTTTTGAATGCTTTACAAAATTAAATCGCAATAAAAATAAGA
ATAAAAATAAATACTGATTGGTTTAAACTTCAATTATTTATTAATAAATTTTACTCATCT
ATTTTCTATTAAATTTAGATACAACAAGTCCACCAAGCTCGGAAGAGGTTTCACCTTACA
AGAATTGAAGGCTGCCGGTATCTCTGCCGCTTTTGCCTAATCTATTGGTATCAAGGTTGA
CCACAGAAGAAAGAACAGATGTCAAGAATCTCTTGAATTAAACAAGAAGAGACTTTTGGC
TTACGTTAGCAAGCTCGTTCTCTTCCCTAGGTAAATAAAGAAACATTAATAAATTTTATT
AGCAAATATAAAGAAATAGGCATAGTATTTTTGTATATATCATTTAAATACCTTCAAATA
ATTTACAAGTTAAGCAATTAGATTATGAATTTTAATCTAAAAATTTTAACTTACTTACCA
TTTTATTTGATTTGTATTTTAACTGAGCAAAAATACTTACTGAATATATATATATATATT
TATATGCAAACTAGCCTAAAGATATTTGCAAGAAATTAATATCTGTAATATGGCAATTTC
TTATCTTTATTTTTAATAAAAATAGACACTAAGGTAAGGCCAAGAAGGGTTTAGTTAATG
ACACCGCTGACACCAGCAGTGCTGCTCAAAACGCCTTATAAACCTCTGTTCCTCTTCCCT
CTGTCTCCAAGAGAGAAAAGGCTGTTTCCAACATCGCTGAACTCAGAAAGAAGAAGGTTT
ACAGAATCATCAGACAAGAAAAGACCAACCAAAAGTGGGATGGAAAGAGAAAGGCTAAAG
CTCAAGCTGCCGCTGAACCCAAGGCATGA

>TTHERM_00578640(protein)
MKHNNQLPVAQLRKHQQFRIKTFFNQAAQKKARLHARRAQAAAVFPRPTEKLQPVVRKQT
QRYNKSTKLGRGFTLQELKAAGISAAFAQSIGIKVDHRRKNRCQESLELNKKRLLAYVSK
LVLFPRHQGKAKKGLVNDTADTSSAAQNALQTSVPLPSVSKREKAVSNIAELRKKKVYRI
IRQEKTNQKWDGKRKAKAQAAAEPKA