Identifiers and Description

Gene Model Identifier

TTHERM_00578940

Standard Name

RPN5 (26S proteasome regulatory subunit N5)

Aliases

PreTt05787 | 78.m00159 | 3733.m00633

Description

RPN5 26S proteasome non-ATPase regulatory subunit; Fusion of uncharacterized protein and 26S proteasome subunit.

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Biological Process

Domains

  • ( PF01399 ) PCI domain
  • ( PF04702 ) Vicilin N terminal region
  • ( PF05073 ) Baculovirus P24 capsid protein
  • ( PF06102 ) Domain of unknown function (DUF947)
  • ( PF08524 ) rRNA processing

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_16310.1 9.997093137033517e-262
Description: hypothetical protein (432 aa)
Oxytricha Contig21741.0.g7 1.0002223712504345e-79
Description: PCI domain
DictyBase DDB_G0281051 8.999119107228014e-72
Description: psmD12 on chromosome: 3 position 3979792 to 3981586
WormBase WBGene00004461 3.998862432046419e-53
Description: locus:rpn-5 status:Confirmed UniProt:Q19324 protein_id:CCD69211.1
SGD YDL147W 7.999866353200662e-52
Description: RPN5 Subunit of the COP9 signalosome (CSN) and non-ATPase regulatory subunit of the 26S proteasome lid, similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein
Stentor Coeruleus SteCoe_7042 4.780892883885469e-25
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences 

>TTHERM_00578940(coding)
ATGGAAATTGAAGAAAGCTCCGAATTCGATAGATAGATTGCTTCCCTCCTCGAAAAGGAA
AGAGAAGCTCGTCTCAATAACAAGAGTGAAGAACTTGTCAACATCGTTAAACAAATCGTC
AAATTAGCTTGGGAAGTAAAAAATTATGACAAGCTCTTTGAACTCATGACTACACTTTCT
TAAAGAAGAGGTCAAAGCAAGAAAGCTTAAACTGATATGATCCAAATTGCTATGGGATAT
ATAGATTAGATTTAAGACATTCCCACTAGAATTAGATTAATCGAAACTATTAAAAACATT
TGTGATAAAAAAATTTACTTAGAAGTAGAATATGCTAGATGTTGTCTAAAGCTCGTTAAA
TACAAGGAAAGTGATAACGAAATTAATGAAGCTGCTAAGATTTTGCAAGAAGTTTAAGTT
GAAACTTATGGCTCTATGGATAAGAGAGAAAAGATTGAATTCATCTTATATCAAATGAAG
ATCATGCTTAAGAAGAAAGATTACATTCGTTTGATGATTATTTCAAAGAAGTTAACACCT
TAAGCCTTAAATGATAAAACAATAGTTGATTTGAAGATTTAATATTACGCTTATTTAGTT
GAATATTACTATCATGAAAGCATATATTTGCAAGTTTCTAACTGCTTCTAACAGATTTTT
GATGCAGTGAATGATAAAATAAACAAGGACATTGAATTGCCTACTGTTTTGGATTTTAAC
TTTGATGCTTCCTTCTAGACTACATTTGAAAATTTTGTTGCTTACCTTCTCATCAATAAG
CACTGCCATGAATAGGTTTAATTGTTACAGAAATTAGTAAGCAGCAAGTATAAACACATT
CTAGAAAGATATCCTGCTTTGAAGAATGCAGTTGAATCTTACTTATTAGATGAATTAATT
TCTACAGACCCTGCAAGTTACAATTTACAGAATATTTAATGTTTTTCTAGACCTGAAAAG
TCAGTTCAACACATAACTGATTTCAGAAAATAATTAATTCATCACAATATTCGTGTTATT
AATAAGTACTACTCTTAAATTTCTTTATCCCGTCTTGCTGCATTATTGAATATTTCTTAA
GAAGAAGCTGAAAATGAGCTTTGTGAAATGCAAAACGACTAGCTAGTAAATTGCAAGATT
GATCGTTTGGAAGGCGTAGTTAATTTCAAGCTTAGACGCTCTGAGAACGATATTCTCAAC
GAATGGGCTACCGATGTTAACTAAATCTTATCATTGATTGATCATACTTCTAACTTAATT
AAGAGAGAAGAAGAATAATACATCGAAGCTAAGTGA


>TTHERM_00578940(gene)
ATGGAAATTGAAGAAAGCTCCGAATTCGATAGATAGATTGCTTCCCTCCTCGAAAAGGAA
AGAGAAGCTCGTCTCAATAACAAGAGTGAAGAACTTGTCAACATCGTTAAACAAATCGTA
ACTCATTCTTTTAGAAGTCATTATTGATTATTGTGTAATGAATGAGCTTTATTGCAGTGT
CTTTCTTTGCAATTAGGTGCCATTACATAAAAATTGAAGCTTATTTTTACTCGAGATTAA
TAATAGAATTATGTTTTCTTTCATATATTTCTATTAAAATTTTTTTATTGTAATAAATAG
GTCAAATTAGCTTGGGAAGTAAAAAATTATGACAAGCTCTTTGAACTCATGACTACACTT
TCTTAAAGAAGAGGTCAAAGCAAGAAAGCTTAAACTGATATGATCCAAATTGCTATGGGA
TATATAGATTAGATTTAAGACATTCCCACTAGAATTAGATTAATCGAAACTATTAAAAAC
ATTTGTGATAAAAAAATTTACTTAGAAGTAAAAATTAGATTTAAATAATAAATTTTTTAG
AGGAAGGAATTACTTTCTTAAAATAATTTAAAAATAATGCGAATTTGAAATAAAGTATTT
CTTGTTTTAATAAATAGGTAGAATATGCTAGATGTTGTCTAAAGCTCGTTAAATACAAGG
AAAGTGATAACGAAATTAATGAAGCTGCTAAGATTTTGCAAGAAGTTTAAGTAGACATTT
CCTTTTATTTTATTTAATAATAAATATACAAATAAAAAAGATACGCTAAAAACGATATTT
GAAATTTTTCAATAAAAATTTGAATACATTCAATTCACAAATTGACTATTAATAACTATG
AATCCTACTTAAATTAATTATTACTAAAAGCAAATCAAGATTTAAATCTTGAATTCCATT
TTACACATTACTACATAGTTTAAATTGAAGTATTTTAAATTTAAAGCTTGCAAAAAGAGT
TATCATTTTGAGAAATAGCAAATAAAAACTAATTTTAAACAGATAATATTCTTAAAATTA
AATATTTTTTATGAATAATCAATGTACTTTGAATAATAAAATAATTACTATTCAATCAGA
CAATTTTAGCATTGATTCTCTTTAATAAGCACAATAAGAATAATTAATAATTAAAATAAT
TATTATTTAGGTATTGAAATAATTTAATTAACAATTTTACTGAATTTAATTTTTTAAGAT
AAAGTTAAATGAATTTCCTCAACAATAAAAAAGACATAGTTTTTGTTTAAGAAATGATTA
ATAATTTTTTAGATCATCCATATAGAAAATAATTTTATTACAACACTCTTAATTTATAAA
ATGTGTTAATTAATTATAATTAAATATATAATATTCTTCAATAAATAAATAGCTTGATAT
CATATTTTTATATATTTAAAAATATTATTATTATTCACTCATAGTTTAGTTTGAATATGA
AATATGAAAATGAAATTATTTTAATAATGTGATTATTATAGAATGATTATTAACTTATCT
ATTTATTTAACGAATAGGTTGAAACTTATGGCTCTATGGATAAGAGAGAAAAGATTGAAT
TCATCTTATATCAAATGAAGATCATGCTTAAGAAGAAAGATTACATTCGTTTGATGATTA
TTTCAAAGAAGTTAACACCTTAAGCCTTAAATGATAAAACAATAGTTGATTTGAAGATTT
AATATTACGCTTATTTAGTTGAATATTACTATCATGAAAGCATATATTTGCAAGTTTCTA
ACTGCTTCTAACAGATTTTTGATGCAGTGAATGATAAAATAAACAAGGACATTGAATTGC
CTACTGTTTTGGATTTTAACTTTGATGCTTCCTTCTAGACTACATTTGAAAATTTTGTTG
CTTACCTTCTCATCAATAAGCACTGCCATGAATAGGTTTAATTGTTACAGAAATTAGTAA
GCAGCAAGTATAAACACATTCTAGAAAGATATCCTGCTTTGAAGAATGCAGTTGAATCTT
ACTTATTAGATGAATTAATTTCTACAGACCCTGCAAGTTACAATTTACAGAATATTTAAT
GTTTTTCTAGACCTGAAAAGTCAGTTCAACACATAACTGATTTCAGAAAATAATTAATTC
ATCACAATATTCGTGTTATTAATAAGTACTACTCTTAAATTTCTTTATCCCGTCTTGCTG
CATTATTGAATATTTCTTAAGAAGAAGCTGAAAATGAGCTTTGTGAAATGCAAAACGACT
AGCTAGTAAATTGCAAGATTGATCGTTTGGAAGGCGTAGTTAATTTCAAGCTTAGACGCT
CTGAGAACGATATTCTCAACGAATGGGCTACCGATGTTAACTAAATCTTATCATTGATTG
ATCATACTTCTAACTTAATTAAGAGAGAAGAAGAATAATACATCGAAGCTAAGTGA


>TTHERM_00578940(protein)
MEIEESSEFDRQIASLLEKEREARLNNKSEELVNIVKQIVKLAWEVKNYDKLFELMTTLS
QRRGQSKKAQTDMIQIAMGYIDQIQDIPTRIRLIETIKNICDKKIYLEVEYARCCLKLVK
YKESDNEINEAAKILQEVQVETYGSMDKREKIEFILYQMKIMLKKKDYIRLMIISKKLTP
QALNDKTIVDLKIQYYAYLVEYYYHESIYLQVSNCFQQIFDAVNDKINKDIELPTVLDFN
FDASFQTTFENFVAYLLINKHCHEQVQLLQKLVSSKYKHILERYPALKNAVESYLLDELI
STDPASYNLQNIQCFSRPEKSVQHITDFRKQLIHHNIRVINKYYSQISLSRLAALLNISQ
EEAENELCEMQNDQLVNCKIDRLEGVVNFKLRRSENDILNEWATDVNQILSLIDHTSNLI
KREEEQYIEAK